Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 RNU6-1310P-201ENST00000384153 107 ntBASIC1.82□□□□□ -2.12
CACNA1FO60840 RNU6-1199P-201ENST00000411249 104 ntBASIC1.82□□□□□ -2.12
CACNA1FO60840 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.82□□□□□ -2.12
CACNA1FO60840 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.82□□□□□ -2.12
CACNA1FO60840 RNA5SP233-201ENST00000459153 113 ntBASIC1.82□□□□□ -2.12
CACNA1FO60840 RNU6-861P-201ENST00000516745 106 ntBASIC1.82□□□□□ -2.12
CACNA1FO60840 DEFB131C-201ENST00000528817 165 ntBASIC1.82□□□□□ -2.12
CACNA1FO60840 MIR5692C2-201ENST00000577959 77 ntBASIC1.82□□□□□ -2.12
CACNA1FO60840 AC069294.1-201ENST00000608397 350 ntBASIC1.82□□□□□ -2.12
CACNA1FO60840 AC098479.1-201ENST00000609225 154 ntBASIC1.82□□□□□ -2.12
CACNA1FO60840 SNORA25.1-201ENST00000362326 128 ntBASIC1.81□□□□□ -2.12
CACNA1FO60840 Y_RNA.270-201ENST00000364693 104 ntBASIC1.81□□□□□ -2.12
CACNA1FO60840 RNU6-923P-201ENST00000364753 107 ntBASIC1.81□□□□□ -2.12
CACNA1FO60840 Y_RNA.286-201ENST00000364813 102 ntBASIC1.81□□□□□ -2.12
CACNA1FO60840 RNU6-234P-201ENST00000365229 104 ntBASIC1.81□□□□□ -2.12
CACNA1FO60840 SNORA67.2-201ENST00000384300 149 ntBASIC1.81□□□□□ -2.12
CACNA1FO60840 MIR518E-201ENST00000385252 88 ntBASIC1.81□□□□□ -2.12
CACNA1FO60840 MIR1283-1-201ENST00000408494 87 ntBASIC1.81□□□□□ -2.12
CACNA1FO60840 SNORD2.1-201ENST00000458762 69 ntBASIC1.81□□□□□ -2.12
CACNA1FO60840 RNU6-1053P-201ENST00000515930 101 ntBASIC1.81□□□□□ -2.12
CACNA1FO60840 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.81□□□□□ -2.12
CACNA1FO60840 AL590240.4-201ENST00000616908 390 ntBASIC1.81□□□□□ -2.12
CACNA1FO60840 U4atac.1-201ENST00000618345 95 ntBASIC1.81□□□□□ -2.12
CACNA1FO60840 AC090517.3-201ENST00000625170 141 ntBASIC1.81□□□□□ -2.12
CACNA1FO60840 MIR3674-201ENST00000636576 68 ntBASIC1.81□□□□□ -2.12
CACNA1FO60840 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CACNA1FO60840 Y_RNA.29-201ENST00000362570 113 ntBASIC1.81□□□□□ -2.12
CACNA1FO60840 SNORA7.1-201ENST00000363750 139 ntBASIC1.81□□□□□ -2.12
CACNA1FO60840 RNU6-493P-201ENST00000391321 108 ntBASIC1.81□□□□□ -2.12
CACNA1FO60840 Y_RNA.626-201ENST00000411288 95 ntBASIC1.81□□□□□ -2.12
CACNA1FO60840 EDDM3CP-201ENST00000415977 425 ntBASIC1.81□□□□□ -2.12
CACNA1FO60840 EIF4EP4-201ENST00000424916 578 ntBASIC1.81□□□□□ -2.12
CACNA1FO60840 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.81□□□□□ -2.12
CACNA1FO60840 RPS20P10-201ENST00000451209 253 ntBASIC1.81□□□□□ -2.12
CACNA1FO60840 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.81□□□□□ -2.12
CACNA1FO60840 RNU2-19P-201ENST00000517288 84 ntBASIC1.81□□□□□ -2.12
CACNA1FO60840 AC079598.5-201ENST00000547460 117 ntBASIC1.81□□□□□ -2.12
CACNA1FO60840 MIR3199-1-201ENST00000582434 88 ntBASIC1.81□□□□□ -2.12
CACNA1FO60840 MIR3660-201ENST00000584845 100 ntBASIC1.81□□□□□ -2.12
CACNA1FO60840 RPL30P11-203ENST00000598995 310 ntBASIC1.81□□□□□ -2.12
CACNA1FO60840 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.8□□□□□ -2.12
CACNA1FO60840 Y_RNA.199-201ENST00000364014 102 ntBASIC1.8□□□□□ -2.12
CACNA1FO60840 SNORA3A-201ENST00000364113 130 ntBASIC1.8□□□□□ -2.12
CACNA1FO60840 Y_RNA.368-201ENST00000365547 113 ntBASIC1.8□□□□□ -2.12
CACNA1FO60840 RNU4-17P-201ENST00000365598 141 ntBASIC1.8□□□□□ -2.12
CACNA1FO60840 MT-TT-201ENST00000387460 66 ntBASIC1.8□□□□□ -2.12
CACNA1FO60840 RNU5E-9P-201ENST00000411164 104 ntBASIC1.8□□□□□ -2.12
CACNA1FO60840 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.8□□□□□ -2.12
CACNA1FO60840 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.8□□□□□ -2.12
CACNA1FO60840 AC114982.1-201ENST00000469402 321 ntBASIC1.8□□□□□ -2.12
CACNA1FO60840 COX6CP14-201ENST00000469580 174 ntBASIC1.8□□□□□ -2.12
CACNA1FO60840 HMGN2P9-201ENST00000476875 229 ntBASIC1.8□□□□□ -2.12
CACNA1FO60840 Y_RNA.662-201ENST00000516028 97 ntBASIC1.8□□□□□ -2.12
CACNA1FO60840 RNU6-155P-201ENST00000516347 100 ntBASIC1.8□□□□□ -2.12
CACNA1FO60840 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.8□□□□□ -2.12
CACNA1FO60840 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.8□□□□□ -2.12
CACNA1FO60840 AC013791.1-201ENST00000616619 62 ntBASIC1.8□□□□□ -2.12
CACNA1FO60840 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CACNA1FO60840 RNU6-545P-201ENST00000362681 104 ntBASIC1.79□□□□□ -2.12
CACNA1FO60840 U3.9-201ENST00000363823 204 ntBASIC1.79□□□□□ -2.12
CACNA1FO60840 RNU1-42P-201ENST00000364033 160 ntBASIC1.79□□□□□ -2.12
CACNA1FO60840 SNORD14D-201ENST00000384390 87 ntBASIC1.79□□□□□ -2.12
CACNA1FO60840 RN7SKP51-201ENST00000410781 304 ntBASIC1.79□□□□□ -2.12
CACNA1FO60840 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.79□□□□□ -2.12
CACNA1FO60840 AC005840.1-201ENST00000498412 377 ntBASIC1.79□□□□□ -2.12
CACNA1FO60840 RNU6-1278P-201ENST00000516130 107 ntBASIC1.79□□□□□ -2.12
CACNA1FO60840 RNU2-12P-201ENST00000517216 168 ntBASIC1.79□□□□□ -2.12
CACNA1FO60840 AL008718.3-201ENST00000610217 321 ntBASIC1.79□□□□□ -2.12
CACNA1FO60840 Y_RNA.518-201ENST00000384552 113 ntBASIC1.79□□□□□ -2.12
CACNA1FO60840 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CACNA1FO60840 SNORA40.19-201ENST00000390846 128 ntBASIC1.79□□□□□ -2.12
CACNA1FO60840 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.79□□□□□ -2.12
CACNA1FO60840 SNRPGP13-201ENST00000442212 177 ntBASIC1.79□□□□□ -2.12
CACNA1FO60840 RNU6-107P-201ENST00000516643 102 ntBASIC1.79□□□□□ -2.12
CACNA1FO60840 AP002001.1-203ENST00000534002 267 ntBASIC1.79□□□□□ -2.12
CACNA1FO60840 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.79□□□□□ -2.12
CACNA1FO60840 RNU6-1266P-201ENST00000362794 105 ntBASIC1.78□□□□□ -2.12
CACNA1FO60840 RNU6-1248P-201ENST00000391096 64 ntBASIC1.78□□□□□ -2.12
CACNA1FO60840 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.78□□□□□ -2.12
CACNA1FO60840 SUMO1P3-201ENST00000439961 304 ntBASIC1.78□□□□□ -2.12
CACNA1FO60840 HSPE1P13-201ENST00000451143 297 ntBASIC1.78□□□□□ -2.12
CACNA1FO60840 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.78□□□□□ -2.12
CACNA1FO60840 AC145146.1-201ENST00000496370 254 ntBASIC1.78□□□□□ -2.12
CACNA1FO60840 SNORA70.12-201ENST00000516084 153 ntBASIC1.78□□□□□ -2.12
CACNA1FO60840 RNY3P16-201ENST00000516338 101 ntBASIC1.78□□□□□ -2.12
CACNA1FO60840 RNU1-117P-201ENST00000517041 158 ntBASIC1.78□□□□□ -2.12
CACNA1FO60840 SNORA31.24-201ENST00000517232 57 ntBASIC1.78□□□□□ -2.12
CACNA1FO60840 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.78□□□□□ -2.12
CACNA1FO60840 AC011921.3-201ENST00000605540 361 ntBASIC1.78□□□□□ -2.12
CACNA1FO60840 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
CACNA1FO60840 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CACNA1FO60840 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
CACNA1FO60840 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
CACNA1FO60840 RNU4-80P-201ENST00000363200 141 ntBASIC1.78□□□□□ -2.13
CACNA1FO60840 Y_RNA.116-201ENST00000363292 103 ntBASIC1.78□□□□□ -2.13
CACNA1FO60840 Y_RNA.170-201ENST00000363746 110 ntBASIC1.78□□□□□ -2.13
CACNA1FO60840 RNU6-682P-201ENST00000363843 106 ntBASIC1.78□□□□□ -2.13
CACNA1FO60840 RNY4P28-201ENST00000365281 93 ntBASIC1.78□□□□□ -2.13
CACNA1FO60840 Y_RNA.466-201ENST00000384294 113 ntBASIC1.78□□□□□ -2.13
CACNA1FO60840 AL031003.1-201ENST00000404229 172 ntBASIC1.78□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms