Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 RN7SL330P-201ENST00000469709 307 ntBASIC3.92□□□□□ -1.78
ACTN4O43707 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
ACTN4O43707 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.92□□□□□ -1.78
ACTN4O43707 AP002004.2-201ENST00000531656 154 ntBASIC3.92□□□□□ -1.78
ACTN4O43707 MIR4666B-201ENST00000578142 81 ntBASIC3.92□□□□□ -1.78
ACTN4O43707 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.92□□□□□ -1.78
ACTN4O43707 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ACTN4O43707 MIR1255B1-201ENST00000636325 63 ntBASIC3.92□□□□□ -1.78
ACTN4O43707 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
ACTN4O43707 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.92□□□□□ -1.78
ACTN4O43707 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.91□□□□□ -1.78
ACTN4O43707 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.91□□□□□ -1.78
ACTN4O43707 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
ACTN4O43707 SNORA1B-201ENST00000362535 133 ntBASIC3.91□□□□□ -1.78
ACTN4O43707 RPL21P3-201ENST00000395517 478 ntBASIC3.91□□□□□ -1.78
ACTN4O43707 AL161788.1-201ENST00000441805 169 ntBASIC3.91□□□□□ -1.78
ACTN4O43707 RNU6-991P-201ENST00000516168 107 ntBASIC3.91□□□□□ -1.78
ACTN4O43707 SCARNA17.1-201ENST00000516211 143 ntBASIC3.91□□□□□ -1.78
ACTN4O43707 SCARNA17.2-201ENST00000516334 143 ntBASIC3.91□□□□□ -1.78
ACTN4O43707 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3.91□□□□□ -1.78
ACTN4O43707 MIR548Z-201ENST00000584743 97 ntBASIC3.91□□□□□ -1.78
ACTN4O43707 SCARNA17.4-201ENST00000614296 143 ntBASIC3.91□□□□□ -1.78
ACTN4O43707 AL121772.2-201ENST00000614331 297 ntBASIC3.91□□□□□ -1.78
ACTN4O43707 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ACTN4O43707 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
ACTN4O43707 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.9□□□□□ -1.78
ACTN4O43707 RNA5SP124-201ENST00000362739 110 ntBASIC3.9□□□□□ -1.79
ACTN4O43707 RNU4-67P-201ENST00000364569 141 ntBASIC3.9□□□□□ -1.79
ACTN4O43707 RNU6-60P-201ENST00000364792 103 ntBASIC3.9□□□□□ -1.79
ACTN4O43707 snoU2-30.1-201ENST00000365012 70 ntBASIC3.9□□□□□ -1.79
ACTN4O43707 RNU6-24P-201ENST00000384440 107 ntBASIC3.9□□□□□ -1.79
ACTN4O43707 SNX2P2-201ENST00000424553 323 ntBASIC3.9□□□□□ -1.79
ACTN4O43707 AC073261.1-201ENST00000429409 121 ntBASIC3.9□□□□□ -1.79
ACTN4O43707 AC107083.1-201ENST00000439643 279 ntBASIC3.9□□□□□ -1.79
ACTN4O43707 U3.44-201ENST00000458938 192 ntBASIC3.9□□□□□ -1.79
ACTN4O43707 RNU7-171P-201ENST00000459581 62 ntBASIC3.9□□□□□ -1.79
ACTN4O43707 RNU1-142P-201ENST00000516682 145 ntBASIC3.9□□□□□ -1.79
ACTN4O43707 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.9□□□□□ -1.79
ACTN4O43707 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.9□□□□□ -1.79
ACTN4O43707 AC002984.1-201ENST00000591692 448 ntBASIC3.9□□□□□ -1.79
ACTN4O43707 AL513534.2-201ENST00000603836 250 ntBASIC3.9□□□□□ -1.79
ACTN4O43707 Y_RNA.773-201ENST00000607168 90 ntBASIC3.9□□□□□ -1.79
ACTN4O43707 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.9□□□□□ -1.79
ACTN4O43707 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.9□□□□□ -1.79
ACTN4O43707 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
ACTN4O43707 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
ACTN4O43707 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
ACTN4O43707 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
ACTN4O43707 AL021368.2-201ENST00000606125 5352 ntBASIC3.89□□□□□ -1.79
ACTN4O43707 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
ACTN4O43707 MIR342-201ENST00000362212 99 ntBASIC3.89□□□□□ -1.79
ACTN4O43707 SNORD115-19-201ENST00000363098 82 ntBASIC3.89□□□□□ -1.79
ACTN4O43707 SNORD115-18-201ENST00000363293 82 ntBASIC3.89□□□□□ -1.79
ACTN4O43707 Y_RNA.190-201ENST00000363964 101 ntBASIC3.89□□□□□ -1.79
ACTN4O43707 SNORD115-17-201ENST00000364612 82 ntBASIC3.89□□□□□ -1.79
ACTN4O43707 RN7SKP200-201ENST00000410564 320 ntBASIC3.89□□□□□ -1.79
ACTN4O43707 CYCSP4-201ENST00000429682 331 ntBASIC3.89□□□□□ -1.79
ACTN4O43707 AC087499.4-201ENST00000448505 178 ntBASIC3.89□□□□□ -1.79
ACTN4O43707 RNU2-11P-201ENST00000459191 187 ntBASIC3.89□□□□□ -1.79
ACTN4O43707 RPS23P4-201ENST00000487908 423 ntBASIC3.89□□□□□ -1.79
ACTN4O43707 SNORA70.19-201ENST00000516717 90 ntBASIC3.89□□□□□ -1.79
ACTN4O43707 AC078899.2-201ENST00000595282 212 ntBASIC3.89□□□□□ -1.79
ACTN4O43707 AC064859.1-201ENST00000624741 174 ntBASIC3.89□□□□□ -1.79
ACTN4O43707 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.88□□□□□ -1.79
ACTN4O43707 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ACTN4O43707 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
ACTN4O43707 SNORD115-13-201ENST00000363358 82 ntBASIC3.88□□□□□ -1.79
ACTN4O43707 SNORD115-16-201ENST00000363887 82 ntBASIC3.88□□□□□ -1.79
ACTN4O43707 SNORD45B-201ENST00000364617 72 ntBASIC3.88□□□□□ -1.79
ACTN4O43707 SNORD115-1-201ENST00000364961 82 ntBASIC3.88□□□□□ -1.79
ACTN4O43707 MIR605-201ENST00000385078 83 ntBASIC3.88□□□□□ -1.79
ACTN4O43707 AL022718.1-201ENST00000412004 84 ntBASIC3.88□□□□□ -1.79
ACTN4O43707 AC009414.1-201ENST00000427200 443 ntBASIC3.88□□□□□ -1.79
ACTN4O43707 SNORA31.1-201ENST00000515993 133 ntBASIC3.88□□□□□ -1.79
ACTN4O43707 SNORA31.5-201ENST00000516190 133 ntBASIC3.88□□□□□ -1.79
ACTN4O43707 RNU6-267P-201ENST00000516714 103 ntBASIC3.88□□□□□ -1.79
ACTN4O43707 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.88□□□□□ -1.79
ACTN4O43707 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.88□□□□□ -1.79
ACTN4O43707 AC019288.1-201ENST00000557918 224 ntBASIC3.88□□□□□ -1.79
ACTN4O43707 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.88□□□□□ -1.79
ACTN4O43707 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
ACTN4O43707 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
ACTN4O43707 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
ACTN4O43707 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ACTN4O43707 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
ACTN4O43707 MIR340-201ENST00000362125 95 ntBASIC3.87□□□□□ -1.79
ACTN4O43707 SNORD115-35-201ENST00000365122 82 ntBASIC3.87□□□□□ -1.79
ACTN4O43707 RNA5SP323-201ENST00000391094 133 ntBASIC3.87□□□□□ -1.79
ACTN4O43707 AL627390.1-201ENST00000396055 340 ntBASIC3.87□□□□□ -1.79
ACTN4O43707 SNRPGP14-201ENST00000435400 219 ntBASIC3.87□□□□□ -1.79
ACTN4O43707 RPS12P18-201ENST00000442381 270 ntBASIC3.87□□□□□ -1.79
ACTN4O43707 SNORD105B-201ENST00000458770 79 ntBASIC3.87□□□□□ -1.79
ACTN4O43707 MIR4777-201ENST00000583710 86 ntBASIC3.87□□□□□ -1.79
ACTN4O43707 AC034229.5-201ENST00000624258 185 ntBASIC3.87□□□□□ -1.79
ACTN4O43707 MIR4662A-201ENST00000637499 67 ntBASIC3.87□□□□□ -1.79
ACTN4O43707 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ACTN4O43707 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ACTN4O43707 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
ACTN4O43707 AL356274.2-201ENST00000624379 3752 ntBASIC3.87□□□□□ -1.79
ACTN4O43707 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms