Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 RNA5SP39-201ENST00000411245 120 ntBASIC6.12□□□□□ -1.43
MSH5O43196 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MSH5O43196 HMGN2P21-201ENST00000447764 270 ntBASIC6.12□□□□□ -1.43
MSH5O43196 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MSH5O43196 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MSH5O43196 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MSH5O43196 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
MSH5O43196 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
MSH5O43196 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
MSH5O43196 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC6.11□□□□□ -1.43
MSH5O43196 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC6.11□□□□□ -1.43
MSH5O43196 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
MSH5O43196 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
MSH5O43196 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
MSH5O43196 RNU6-249P-201ENST00000363016 102 ntBASIC6.11□□□□□ -1.43
MSH5O43196 RNU4-33P-201ENST00000364316 85 ntBASIC6.11□□□□□ -1.43
MSH5O43196 RNU1-82P-201ENST00000390851 165 ntBASIC6.11□□□□□ -1.43
MSH5O43196 COX6CP13-201ENST00000428703 226 ntBASIC6.11□□□□□ -1.43
MSH5O43196 AL691482.1-201ENST00000453255 87 ntBASIC6.11□□□□□ -1.43
MSH5O43196 RNU7-23P-201ENST00000459465 62 ntBASIC6.11□□□□□ -1.43
MSH5O43196 Y_RNA.697-201ENST00000516776 113 ntBASIC6.11□□□□□ -1.43
MSH5O43196 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC6.11□□□□□ -1.43
MSH5O43196 RNA5SP196-201ENST00000625967 102 ntBASIC6.11□□□□□ -1.43
MSH5O43196 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
MSH5O43196 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
MSH5O43196 Y_RNA.537-201ENST00000384626 109 ntBASIC6.1□□□□□ -1.43
MSH5O43196 HMGN2P39-201ENST00000398005 273 ntBASIC6.1□□□□□ -1.43
MSH5O43196 RNU6-1052P-201ENST00000411398 104 ntBASIC6.1□□□□□ -1.43
MSH5O43196 RPS12P10-201ENST00000427031 377 ntBASIC6.1□□□□□ -1.43
MSH5O43196 ATP6V1G1P6-201ENST00000504007 334 ntBASIC6.1□□□□□ -1.43
MSH5O43196 AC015795.1-201ENST00000513669 327 ntBASIC6.1□□□□□ -1.43
MSH5O43196 RNA5SP112-201ENST00000515937 99 ntBASIC6.1□□□□□ -1.43
MSH5O43196 RNU6-719P-201ENST00000516671 104 ntBASIC6.1□□□□□ -1.43
MSH5O43196 CYP3A52P-201ENST00000563326 91 ntBASIC6.1□□□□□ -1.43
MSH5O43196 LINC00901.1-201ENST00000617252 152 ntBASIC6.1□□□□□ -1.43
MSH5O43196 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
MSH5O43196 AP000542.2-201ENST00000623199 6179 ntBASIC6.1□□□□□ -1.43
MSH5O43196 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
MSH5O43196 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC6.09□□□□□ -1.43
MSH5O43196 MIR670-201ENST00000390142 98 ntBASIC6.09□□□□□ -1.43
MSH5O43196 RNA5SP109-201ENST00000391010 116 ntBASIC6.09□□□□□ -1.43
MSH5O43196 RNA5SP171-201ENST00000391071 115 ntBASIC6.09□□□□□ -1.43
MSH5O43196 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC6.09□□□□□ -1.43
MSH5O43196 RN7SL303P-201ENST00000469773 251 ntBASIC6.09□□□□□ -1.43
MSH5O43196 RNU6-902P-201ENST00000517212 91 ntBASIC6.09□□□□□ -1.43
MSH5O43196 AC023632.4-201ENST00000517783 191 ntBASIC6.09□□□□□ -1.43
MSH5O43196 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC6.09□□□□□ -1.43
MSH5O43196 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
MSH5O43196 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
MSH5O43196 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
MSH5O43196 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC6.08□□□□□ -1.44
MSH5O43196 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
MSH5O43196 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
MSH5O43196 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
MSH5O43196 RNU6-949P-201ENST00000384040 107 ntBASIC6.08□□□□□ -1.44
MSH5O43196 RNU6-520P-201ENST00000384717 104 ntBASIC6.08□□□□□ -1.44
MSH5O43196 MIR93-201ENST00000385024 80 ntBASIC6.08□□□□□ -1.44
MSH5O43196 RPS26P8-201ENST00000393490 348 ntBASIC6.08□□□□□ -1.44
MSH5O43196 RNA5SP129-201ENST00000410276 118 ntBASIC6.08□□□□□ -1.44
MSH5O43196 AL161788.1-201ENST00000441805 169 ntBASIC6.08□□□□□ -1.44
MSH5O43196 ATP5J2P3-201ENST00000451550 258 ntBASIC6.08□□□□□ -1.44
MSH5O43196 SNORD123-201ENST00000459473 70 ntBASIC6.08□□□□□ -1.44
MSH5O43196 RNA5SP468-201ENST00000516782 93 ntBASIC6.08□□□□□ -1.44
MSH5O43196 SNORA28-201ENST00000606769 126 ntBASIC6.08□□□□□ -1.44
MSH5O43196 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
MSH5O43196 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
MSH5O43196 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
MSH5O43196 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
MSH5O43196 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
MSH5O43196 RNA5SP322-201ENST00000363617 119 ntBASIC6.07□□□□□ -1.44
MSH5O43196 SNORA71.2-201ENST00000364941 134 ntBASIC6.07□□□□□ -1.44
MSH5O43196 U8.16-201ENST00000391279 133 ntBASIC6.07□□□□□ -1.44
MSH5O43196 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC6.07□□□□□ -1.44
MSH5O43196 AC099522.1-202ENST00000514718 367 ntBASIC6.07□□□□□ -1.44
MSH5O43196 IST1-227ENST00000626438 126 ntTSL 5 BASIC6.07□□□□□ -1.44
MSH5O43196 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC6.07□□□□□ -1.44
MSH5O43196 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
MSH5O43196 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
MSH5O43196 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
MSH5O43196 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC6.06□□□□□ -1.44
MSH5O43196 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC6.06□□□□□ -1.44
MSH5O43196 RNA5SP513-201ENST00000364648 118 ntBASIC6.06□□□□□ -1.44
MSH5O43196 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
MSH5O43196 AC009969.1-201ENST00000438726 172 ntBASIC6.06□□□□□ -1.44
MSH5O43196 SNORD108-201ENST00000459332 71 ntBASIC6.06□□□□□ -1.44
MSH5O43196 snoU13.22-201ENST00000459428 104 ntBASIC6.06□□□□□ -1.44
MSH5O43196 RNU1-6P-201ENST00000516290 144 ntBASIC6.06□□□□□ -1.44
MSH5O43196 UBL5P2-201ENST00000583788 219 ntBASIC6.06□□□□□ -1.44
MSH5O43196 AL121932.1-201ENST00000605542 214 ntBASIC6.06□□□□□ -1.44
MSH5O43196 AC008079.2-201ENST00000623543 20396 ntBASIC6.05□□□□□ -1.44
MSH5O43196 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
MSH5O43196 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
MSH5O43196 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
MSH5O43196 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
MSH5O43196 RNU6-198P-201ENST00000384258 104 ntBASIC6.05□□□□□ -1.44
MSH5O43196 MIR452-201ENST00000385020 85 ntBASIC6.05□□□□□ -1.44
MSH5O43196 MIR513A2-201ENST00000385249 127 ntBASIC6.05□□□□□ -1.44
MSH5O43196 CST2P1-201ENST00000425770 87 ntBASIC6.05□□□□□ -1.44
MSH5O43196 RNU6ATAC13P-201ENST00000516152 131 ntBASIC6.05□□□□□ -1.44
MSH5O43196 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms