Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 RN7SKP179-201ENST00000516126 217 ntBASIC2.75□□□□□ -1.97
SHOXO15266 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.75□□□□□ -1.97
SHOXO15266 AC131055.1-201ENST00000584626 316 ntBASIC2.75□□□□□ -1.97
SHOXO15266 AL121772.2-201ENST00000614331 297 ntBASIC2.75□□□□□ -1.97
SHOXO15266 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
SHOXO15266 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SHOXO15266 Y_RNA.120-201ENST00000363304 110 ntBASIC2.74□□□□□ -1.97
SHOXO15266 SNORA38-201ENST00000363946 132 ntBASIC2.74□□□□□ -1.97
SHOXO15266 SNORD18B-201ENST00000365659 72 ntBASIC2.74□□□□□ -1.97
SHOXO15266 SNORA5A-201ENST00000384111 134 ntBASIC2.74□□□□□ -1.97
SHOXO15266 MIR802-201ENST00000390235 94 ntBASIC2.74□□□□□ -1.97
SHOXO15266 NDUFB4P4-201ENST00000404822 243 ntBASIC2.74□□□□□ -1.97
SHOXO15266 Z92545.1-201ENST00000411782 234 ntBASIC2.74□□□□□ -1.97
SHOXO15266 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.74□□□□□ -1.97
SHOXO15266 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.74□□□□□ -1.97
SHOXO15266 AC115115.1-201ENST00000449927 248 ntBASIC2.74□□□□□ -1.97
SHOXO15266 RNU4-57P-201ENST00000515980 135 ntBASIC2.74□□□□□ -1.97
SHOXO15266 SNORA18.4-201ENST00000516440 124 ntBASIC2.74□□□□□ -1.97
SHOXO15266 AC004486.1-201ENST00000546846 233 ntBASIC2.74□□□□□ -1.97
SHOXO15266 U6.108-201ENST00000637764 58 ntBASIC2.74□□□□□ -1.97
SHOXO15266 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
SHOXO15266 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.73□□□□□ -1.97
SHOXO15266 AC009487.2-201ENST00000420969 6821 ntBASIC2.73□□□□□ -1.97
SHOXO15266 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SHOXO15266 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SHOXO15266 Y_RNA.273-201ENST00000364703 102 ntBASIC2.73□□□□□ -1.97
SHOXO15266 MIR218-2-201ENST00000385006 110 ntBASIC2.73□□□□□ -1.97
SHOXO15266 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.73□□□□□ -1.97
SHOXO15266 AC025518.1-201ENST00000479856 347 ntBASIC2.73□□□□□ -1.97
SHOXO15266 AL049873.1-201ENST00000480540 376 ntBASIC2.73□□□□□ -1.97
SHOXO15266 Y_RNA.692-201ENST00000516627 105 ntBASIC2.73□□□□□ -1.97
SHOXO15266 MIR3126-201ENST00000577443 74 ntBASIC2.73□□□□□ -1.97
SHOXO15266 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.73□□□□□ -1.97
SHOXO15266 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.73□□□□□ -1.97
SHOXO15266 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SHOXO15266 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.73□□□□□ -1.97
SHOXO15266 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.73□□□□□ -1.97
SHOXO15266 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.73□□□□□ -1.97
SHOXO15266 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
SHOXO15266 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
SHOXO15266 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SHOXO15266 AC245060.5-201ENST00000610778 3293 ntBASIC2.72□□□□□ -1.97
SHOXO15266 MIR126-201ENST00000362291 85 ntBASIC2.72□□□□□ -1.97
SHOXO15266 RNA5SP119-201ENST00000362715 117 ntBASIC2.72□□□□□ -1.97
SHOXO15266 RNU6-862P-201ENST00000362804 105 ntBASIC2.72□□□□□ -1.97
SHOXO15266 Y_RNA.486-201ENST00000384398 107 ntBASIC2.72□□□□□ -1.97
SHOXO15266 RN7SKP111-201ENST00000410349 271 ntBASIC2.72□□□□□ -1.97
SHOXO15266 RNA5SP127-201ENST00000411051 133 ntBASIC2.72□□□□□ -1.97
SHOXO15266 SNORA59A-201ENST00000459326 152 ntBASIC2.72□□□□□ -1.97
SHOXO15266 AL049830.1-201ENST00000468034 425 ntBASIC2.72□□□□□ -1.97
SHOXO15266 MRPS17P9-201ENST00000511924 393 ntBASIC2.72□□□□□ -1.97
SHOXO15266 CYCSP26-201ENST00000534107 320 ntBASIC2.72□□□□□ -1.97
SHOXO15266 MIR4513-201ENST00000581077 86 ntBASIC2.72□□□□□ -1.97
SHOXO15266 MIR3670-2-201ENST00000582974 65 ntBASIC2.72□□□□□ -1.97
SHOXO15266 MIR3670-1-201ENST00000584160 65 ntBASIC2.72□□□□□ -1.97
SHOXO15266 MIR3670-3-201ENST00000584855 65 ntBASIC2.72□□□□□ -1.97
SHOXO15266 AC008507.4-201ENST00000585464 127 ntBASIC2.72□□□□□ -1.97
SHOXO15266 AC005786.1-201ENST00000588553 154 ntBASIC2.72□□□□□ -1.97
SHOXO15266 AL365205.2-201ENST00000594586 68 ntBASIC2.72□□□□□ -1.97
SHOXO15266 MIR3670-4-201ENST00000612260 65 ntBASIC2.72□□□□□ -1.97
SHOXO15266 AC009093.8-201ENST00000641769 292 ntBASIC2.72□□□□□ -1.97
SHOXO15266 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SHOXO15266 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.71□□□□□ -1.97
SHOXO15266 RNU4-35P-201ENST00000362588 141 ntBASIC2.71□□□□□ -1.98
SHOXO15266 Y_RNA.261-201ENST00000364631 102 ntBASIC2.71□□□□□ -1.98
SHOXO15266 RNU1-91P-201ENST00000364746 163 ntBASIC2.71□□□□□ -1.98
SHOXO15266 SNORA9-201ENST00000384215 133 ntBASIC2.71□□□□□ -1.98
SHOXO15266 SNORA12.1-201ENST00000390873 148 ntBASIC2.71□□□□□ -1.98
SHOXO15266 CST9LP2-201ENST00000437612 320 ntBASIC2.71□□□□□ -1.98
SHOXO15266 NDUFA4P2-201ENST00000489989 244 ntBASIC2.71□□□□□ -1.98
SHOXO15266 AL163195.1-201ENST00000496941 348 ntBASIC2.71□□□□□ -1.98
SHOXO15266 RNU6-1234P-201ENST00000516877 103 ntBASIC2.71□□□□□ -1.98
SHOXO15266 AC090049.2-201ENST00000550377 109 ntBASIC2.71□□□□□ -1.98
SHOXO15266 MIR3169-201ENST00000578032 83 ntBASIC2.71□□□□□ -1.98
SHOXO15266 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.71□□□□□ -1.98
SHOXO15266 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
SHOXO15266 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SHOXO15266 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
SHOXO15266 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SHOXO15266 SNORA1B-201ENST00000362535 133 ntBASIC2.7□□□□□ -1.98
SHOXO15266 SNORD115-3-201ENST00000363100 82 ntBASIC2.7□□□□□ -1.98
SHOXO15266 SNORA33-201ENST00000363664 130 ntBASIC2.7□□□□□ -1.98
SHOXO15266 MIR624-201ENST00000385217 97 ntBASIC2.7□□□□□ -1.98
SHOXO15266 SNORD17-201ENST00000390930 237 ntBASIC2.7□□□□□ -1.98
SHOXO15266 RNU7-26P-201ENST00000458980 63 ntBASIC2.7□□□□□ -1.98
SHOXO15266 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.7□□□□□ -1.98
SHOXO15266 MIR5195-201ENST00000583555 115 ntBASIC2.7□□□□□ -1.98
SHOXO15266 RPL12P50-201ENST00000603116 116 ntBASIC2.7□□□□□ -1.98
SHOXO15266 U3.45-201ENST00000607547 219 ntBASIC2.7□□□□□ -1.98
SHOXO15266 AL591926.4-201ENST00000616895 298 ntBASIC2.7□□□□□ -1.98
SHOXO15266 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.69□□□□□ -1.98
SHOXO15266 RNU6-834P-201ENST00000362367 110 ntBASIC2.69□□□□□ -1.98
SHOXO15266 RNU1-58P-201ENST00000362413 163 ntBASIC2.69□□□□□ -1.98
SHOXO15266 Y_RNA.66-201ENST00000362862 102 ntBASIC2.69□□□□□ -1.98
SHOXO15266 SNORA25.6-201ENST00000364121 118 ntBASIC2.69□□□□□ -1.98
SHOXO15266 RNU6-1164P-201ENST00000364428 107 ntBASIC2.69□□□□□ -1.98
SHOXO15266 SNORD24-201ENST00000383884 75 ntBASIC2.69□□□□□ -1.98
SHOXO15266 RPS29P4-201ENST00000414733 161 ntBASIC2.69□□□□□ -1.98
SHOXO15266 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.69□□□□□ -1.98
SHOXO15266 MLLT10P1-201ENST00000418346 262 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms