Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 MTND4P3-201ENST00000417829 541 ntBASIC-0.32□□□□□ -2.46
CACNA1AO00555 AL117351.1-201ENST00000438864 766 ntBASIC-0.32□□□□□ -2.46
CACNA1AO00555 AC007327.1-201ENST00000447461 264 ntBASIC-0.32□□□□□ -2.46
CACNA1AO00555 AC010486.3-201ENST00000511602 785 ntBASIC-0.32□□□□□ -2.46
CACNA1AO00555 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.32□□□□□ -2.46
CACNA1AO00555 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-0.32□□□□□ -2.46
CACNA1AO00555 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.32□□□□□ -2.46
CACNA1AO00555 AC123904.2-201ENST00000548059 300 ntBASIC-0.32□□□□□ -2.46
CACNA1AO00555 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-0.32□□□□□ -2.46
CACNA1AO00555 MIR544B-201ENST00000582372 78 ntBASIC-0.32□□□□□ -2.46
CACNA1AO00555 MIR4676-201ENST00000583078 72 ntBASIC-0.32□□□□□ -2.46
CACNA1AO00555 MIR3925-201ENST00000584674 77 ntBASIC-0.32□□□□□ -2.46
CACNA1AO00555 SNORD92-201ENST00000585078 85 ntBASIC-0.32□□□□□ -2.46
CACNA1AO00555 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-0.32□□□□□ -2.46
CACNA1AO00555 AC097460.3-201ENST00000623099 442 ntBASIC-0.32□□□□□ -2.46
CACNA1AO00555 AL008636.1-201ENST00000625038 1018 ntBASIC-0.32□□□□□ -2.46
CACNA1AO00555 AC073343.1-201ENST00000328239 651 ntBASIC-0.32□□□□□ -2.46
CACNA1AO00555 SNORD115-8-201ENST00000363856 82 ntBASIC-0.32□□□□□ -2.46
CACNA1AO00555 RNU6-336P-201ENST00000364891 107 ntBASIC-0.32□□□□□ -2.46
CACNA1AO00555 SNORD115-38-201ENST00000365037 82 ntBASIC-0.32□□□□□ -2.46
CACNA1AO00555 SNORD93-201ENST00000408813 74 ntBASIC-0.32□□□□□ -2.46
CACNA1AO00555 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-0.32□□□□□ -2.46
CACNA1AO00555 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-0.32□□□□□ -2.46
CACNA1AO00555 RPL39P34-201ENST00000477141 156 ntBASIC-0.32□□□□□ -2.46
CACNA1AO00555 RNU6-706P-201ENST00000517229 104 ntBASIC-0.32□□□□□ -2.46
CACNA1AO00555 AC026470.2-201ENST00000561492 181 ntBASIC-0.32□□□□□ -2.46
CACNA1AO00555 MIR4307-201ENST00000582802 84 ntBASIC-0.32□□□□□ -2.46
CACNA1AO00555 MIR4264-201ENST00000583520 66 ntBASIC-0.32□□□□□ -2.46
CACNA1AO00555 BNIP3P40-201ENST00000596017 556 ntBASIC-0.32□□□□□ -2.46
CACNA1AO00555 OR4H6P-202ENST00000603819 340 ntBASIC-0.32□□□□□ -2.46
CACNA1AO00555 MIR7107-201ENST00000611489 80 ntBASIC-0.32□□□□□ -2.46
CACNA1AO00555 MIR6129-201ENST00000616087 109 ntBASIC-0.32□□□□□ -2.46
CACNA1AO00555 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.32□□□□□ -2.46
CACNA1AO00555 RNU6-227P-201ENST00000362865 103 ntBASIC-0.33□□□□□ -2.46
CACNA1AO00555 RNU6-384P-201ENST00000364900 104 ntBASIC-0.33□□□□□ -2.46
CACNA1AO00555 RNU6-827P-201ENST00000365553 106 ntBASIC-0.33□□□□□ -2.46
CACNA1AO00555 AC117470.1-201ENST00000381974 330 ntBASIC-0.33□□□□□ -2.46
CACNA1AO00555 Y_RNA.408-201ENST00000383987 102 ntBASIC-0.33□□□□□ -2.46
CACNA1AO00555 RNU6-811P-201ENST00000384069 107 ntBASIC-0.33□□□□□ -2.46
CACNA1AO00555 Y_RNA.436-201ENST00000384097 102 ntBASIC-0.33□□□□□ -2.46
CACNA1AO00555 RNU6-207P-201ENST00000384137 107 ntBASIC-0.33□□□□□ -2.46
CACNA1AO00555 SNORA24.1-201ENST00000384401 135 ntBASIC-0.33□□□□□ -2.46
CACNA1AO00555 Y_RNA.529-201ENST00000384586 119 ntBASIC-0.33□□□□□ -2.46
CACNA1AO00555 MIR501-201ENST00000390204 84 ntBASIC-0.33□□□□□ -2.46
CACNA1AO00555 RNU6-1106P-201ENST00000390845 107 ntBASIC-0.33□□□□□ -2.46
CACNA1AO00555 U8.17-201ENST00000391292 132 ntBASIC-0.33□□□□□ -2.46
CACNA1AO00555 MIR1257-201ENST00000408490 117 ntBASIC-0.33□□□□□ -2.46
CACNA1AO00555 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.33□□□□□ -2.46
CACNA1AO00555 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-0.33□□□□□ -2.46
CACNA1AO00555 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.33□□□□□ -2.46
CACNA1AO00555 AC105417.1-201ENST00000514691 285 ntBASIC-0.33□□□□□ -2.46
CACNA1AO00555 RNU6-135P-201ENST00000516769 101 ntBASIC-0.33□□□□□ -2.46
CACNA1AO00555 RNU7-172P-201ENST00000517125 64 ntBASIC-0.33□□□□□ -2.46
CACNA1AO00555 AC109479.2-201ENST00000517842 174 ntBASIC-0.33□□□□□ -2.46
CACNA1AO00555 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-0.33□□□□□ -2.46
CACNA1AO00555 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.33□□□□□ -2.46
CACNA1AO00555 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-0.33□□□□□ -2.46
CACNA1AO00555 MIR8066-201ENST00000617280 78 ntBASIC-0.33□□□□□ -2.46
CACNA1AO00555 uc_338.11-201ENST00000619132 160 ntBASIC-0.33□□□□□ -2.46
CACNA1AO00555 AC137590.2-201ENST00000619709 240 ntBASIC-0.33□□□□□ -2.46
CACNA1AO00555 AC084368.1-201ENST00000620935 65 ntBASIC-0.33□□□□□ -2.46
CACNA1AO00555 RNU6-490P-201ENST00000362985 107 ntBASIC-0.33□□□□□ -2.46
CACNA1AO00555 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.33□□□□□ -2.46
CACNA1AO00555 Y_RNA.415-201ENST00000384012 112 ntBASIC-0.33□□□□□ -2.46
CACNA1AO00555 SNORD38C-201ENST00000384381 69 ntBASIC-0.33□□□□□ -2.46
CACNA1AO00555 MIR125B2-201ENST00000385128 89 ntBASIC-0.33□□□□□ -2.46
CACNA1AO00555 RNA5SP163-201ENST00000410304 99 ntBASIC-0.33□□□□□ -2.46
CACNA1AO00555 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.33□□□□□ -2.46
CACNA1AO00555 ZNF736P7Y-201ENST00000425158 820 ntBASIC-0.33□□□□□ -2.46
CACNA1AO00555 POLR2KP2-201ENST00000438155 177 ntBASIC-0.33□□□□□ -2.46
CACNA1AO00555 RNU6-1178P-201ENST00000516674 107 ntBASIC-0.33□□□□□ -2.46
CACNA1AO00555 RNU6-323P-201ENST00000521915 107 ntBASIC-0.33□□□□□ -2.46
CACNA1AO00555 AP001372.4-201ENST00000524889 472 ntBASIC-0.33□□□□□ -2.46
CACNA1AO00555 AC090617.3-201ENST00000573670 475 ntBASIC-0.33□□□□□ -2.46
CACNA1AO00555 MIR3118-1-201ENST00000581787 76 ntBASIC-0.33□□□□□ -2.46
CACNA1AO00555 MIR4677-201ENST00000584153 80 ntBASIC-0.33□□□□□ -2.46
CACNA1AO00555 AC005562.2-201ENST00000618264 111 ntBASIC-0.33□□□□□ -2.46
CACNA1AO00555 RNU6-236P-201ENST00000363886 106 ntBASIC-0.34□□□□□ -2.46
CACNA1AO00555 RNU6-652P-201ENST00000365488 107 ntBASIC-0.34□□□□□ -2.46
CACNA1AO00555 Y_RNA.450-201ENST00000384198 113 ntBASIC-0.34□□□□□ -2.46
CACNA1AO00555 RNU6-692P-201ENST00000384496 107 ntBASIC-0.34□□□□□ -2.46
CACNA1AO00555 MIR136-201ENST00000385207 82 ntBASIC-0.34□□□□□ -2.46
CACNA1AO00555 MIR516B1-201ENST00000385211 90 ntBASIC-0.34□□□□□ -2.46
CACNA1AO00555 MT-TN-201ENST00000387400 73 ntBASIC-0.34□□□□□ -2.46
CACNA1AO00555 SNORA40.2-201ENST00000390847 128 ntBASIC-0.34□□□□□ -2.46
CACNA1AO00555 SNORA3B-201ENST00000391305 131 ntBASIC-0.34□□□□□ -2.46
CACNA1AO00555 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.34□□□□□ -2.46
CACNA1AO00555 AC133104.1-201ENST00000429100 218 ntBASIC-0.34□□□□□ -2.46
CACNA1AO00555 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-0.34□□□□□ -2.46
CACNA1AO00555 USP9YP25-201ENST00000457708 443 ntBASIC-0.34□□□□□ -2.46
CACNA1AO00555 MTND3P25-201ENST00000509243 135 ntBASIC-0.34□□□□□ -2.46
CACNA1AO00555 RNU4-49P-201ENST00000516080 140 ntBASIC-0.34□□□□□ -2.46
CACNA1AO00555 SNORA31.14-201ENST00000516728 116 ntBASIC-0.34□□□□□ -2.46
CACNA1AO00555 CR383656.4-201ENST00000546909 122 ntBASIC-0.34□□□□□ -2.46
CACNA1AO00555 AC091178.2-201ENST00000584401 117 ntBASIC-0.34□□□□□ -2.46
CACNA1AO00555 AC020891.4-201ENST00000605745 93 ntBASIC-0.34□□□□□ -2.46
CACNA1AO00555 AC016911.1-201ENST00000613297 452 ntBASIC-0.34□□□□□ -2.46
CACNA1AO00555 AL078596.1-201ENST00000624856 447 ntBASIC-0.34□□□□□ -2.46
CACNA1AO00555 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.34□□□□□ -2.46
CACNA1AO00555 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.34□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms