Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC006435.5-201ENST00000624486 112 ntBASIC1.54□□□□□ -2.16
O00370 Y_RNA.645-201ENST00000391229 102 ntBASIC1.53□□□□□ -2.16
O00370 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.53□□□□□ -2.16
O00370 AC233266.1-201ENST00000454518 96 ntBASIC1.53□□□□□ -2.16
O00370 RPS29P29-201ENST00000456396 171 ntBASIC1.53□□□□□ -2.16
O00370 RPS26P55-201ENST00000471178 356 ntBASIC1.53□□□□□ -2.16
O00370 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
O00370 RNU6-475P-201ENST00000516073 104 ntBASIC1.53□□□□□ -2.16
O00370 RNU6-1046P-201ENST00000516538 107 ntBASIC1.53□□□□□ -2.16
O00370 RNU6-1291P-201ENST00000516591 104 ntBASIC1.53□□□□□ -2.16
O00370 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
O00370 AC020661.2-201ENST00000560114 134 ntBASIC1.53□□□□□ -2.16
O00370 MIR3684-201ENST00000579779 74 ntBASIC1.53□□□□□ -2.16
O00370 AC044792.1-201ENST00000593294 196 ntBASIC1.53□□□□□ -2.16
O00370 AC022217.4-201ENST00000604389 163 ntBASIC1.53□□□□□ -2.16
O00370 AC011373.1-201ENST00000607270 237 ntBASIC1.53□□□□□ -2.16
O00370 PART1_1.1-201ENST00000611761 217 ntBASIC1.53□□□□□ -2.16
O00370 AC242852.1-201ENST00000612151 96 ntBASIC1.53□□□□□ -2.16
O00370 AC244015.1-201ENST00000622301 99 ntBASIC1.53□□□□□ -2.16
O00370 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
O00370 RNU1-78P-201ENST00000391248 165 ntBASIC1.52□□□□□ -2.17
O00370 RN7SKP51-201ENST00000410781 304 ntBASIC1.52□□□□□ -2.17
O00370 Y_RNA.621-201ENST00000411065 96 ntBASIC1.52□□□□□ -2.17
O00370 AP1B1P2-201ENST00000416196 106 ntBASIC1.52□□□□□ -2.17
O00370 AC091021.1-201ENST00000468051 388 ntBASIC1.52□□□□□ -2.17
O00370 Y_RNA.715-201ENST00000517082 110 ntBASIC1.52□□□□□ -2.17
O00370 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.52□□□□□ -2.17
O00370 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.52□□□□□ -2.17
O00370 AC104695.3-201ENST00000604052 296 ntBASIC1.52□□□□□ -2.17
O00370 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.52□□□□□ -2.17
O00370 AC127459.3-201ENST00000624328 466 ntBASIC1.52□□□□□ -2.17
O00370 AL161722.3-201ENST00000605789 2983 ntBASIC1.52□□□□□ -2.17
O00370 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.52□□□□□ -2.17
O00370 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.51□□□□□ -2.17
O00370 Y_RNA.230-201ENST00000364348 109 ntBASIC1.51□□□□□ -2.17
O00370 Y_RNA.243-201ENST00000364481 109 ntBASIC1.51□□□□□ -2.17
O00370 Y_RNA.329-201ENST00000365209 107 ntBASIC1.51□□□□□ -2.17
O00370 Y_RNA.570-201ENST00000384750 101 ntBASIC1.51□□□□□ -2.17
O00370 RNU6-823P-201ENST00000391042 103 ntBASIC1.51□□□□□ -2.17
O00370 Y_RNA.602-201ENST00000410535 92 ntBASIC1.51□□□□□ -2.17
O00370 RNU6-130P-201ENST00000411112 103 ntBASIC1.51□□□□□ -2.17
O00370 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.51□□□□□ -2.17
O00370 STAG3L5P-204ENST00000443759 179 ntBASIC1.51□□□□□ -2.17
O00370 AC005042.3-201ENST00000453230 174 ntBASIC1.51□□□□□ -2.17
O00370 SNORA70.12-201ENST00000516084 153 ntBASIC1.51□□□□□ -2.17
O00370 Y_RNA.673-201ENST00000516306 88 ntBASIC1.51□□□□□ -2.17
O00370 RNU2-56P-201ENST00000516826 190 ntBASIC1.51□□□□□ -2.17
O00370 MIR3145-201ENST00000580727 82 ntBASIC1.51□□□□□ -2.17
O00370 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.51□□□□□ -2.17
O00370 MIR6079-201ENST00000635807 62 ntBASIC1.51□□□□□ -2.17
O00370 AC018630.2-201ENST00000534866 2403 ntBASIC1.51□□□□□ -2.17
O00370 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.51□□□□□ -2.17
O00370 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
O00370 ICE2P2-201ENST00000483823 2787 ntBASIC1.5□□□□□ -2.17
O00370 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
O00370 Y_RNA.202-201ENST00000364083 110 ntBASIC1.5□□□□□ -2.17
O00370 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
O00370 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.5□□□□□ -2.17
O00370 RPS27P1-201ENST00000450552 247 ntBASIC1.5□□□□□ -2.17
O00370 RPS26P45-201ENST00000471748 340 ntBASIC1.5□□□□□ -2.17
O00370 AC093852.1-201ENST00000503587 266 ntBASIC1.5□□□□□ -2.17
O00370 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.5□□□□□ -2.17
O00370 RNU6-1337P-201ENST00000516525 95 ntBASIC1.5□□□□□ -2.17
O00370 SNORA40.15-201ENST00000516884 107 ntBASIC1.5□□□□□ -2.17
O00370 Y_RNA.713-201ENST00000517013 96 ntBASIC1.5□□□□□ -2.17
O00370 RAC1P9-201ENST00000604990 392 ntBASIC1.5□□□□□ -2.17
O00370 MIR376A1-201ENST00000616574 68 ntBASIC1.5□□□□□ -2.17
O00370 AC010205.1-201ENST00000616668 449 ntBASIC1.5□□□□□ -2.17
O00370 MIR8054-201ENST00000620877 86 ntBASIC1.5□□□□□ -2.17
O00370 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.5□□□□□ -2.17
O00370 AC095038.3-201ENST00000634439 195 ntBASIC1.5□□□□□ -2.17
O00370 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
O00370 U8.1-201ENST00000362843 134 ntBASIC1.49□□□□□ -2.17
O00370 RNU6-855P-201ENST00000410395 104 ntBASIC1.49□□□□□ -2.17
O00370 RNU6-321P-201ENST00000410912 106 ntBASIC1.49□□□□□ -2.17
O00370 RNU5A-5P-201ENST00000411054 116 ntBASIC1.49□□□□□ -2.17
O00370 JTBP1-201ENST00000441314 247 ntBASIC1.49□□□□□ -2.17
O00370 SUMO1P2-201ENST00000452524 304 ntBASIC1.49□□□□□ -2.17
O00370 RNU7-94P-201ENST00000459576 63 ntBASIC1.49□□□□□ -2.17
O00370 Y_RNA.721-201ENST00000517207 102 ntBASIC1.49□□□□□ -2.17
O00370 AC022616.4-201ENST00000522985 181 ntBASIC1.49□□□□□ -2.17
O00370 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.49□□□□□ -2.17
O00370 DNAJC19P9-201ENST00000555084 351 ntBASIC1.49□□□□□ -2.17
O00370 DEFB117-201ENST00000602356 141 ntBASIC1.49□□□□□ -2.17
O00370 AC022441.3-201ENST00000605737 136 ntBASIC1.49□□□□□ -2.17
O00370 AC005828.6-201ENST00000606610 232 ntBASIC1.49□□□□□ -2.17
O00370 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
O00370 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
O00370 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.48□□□□□ -2.17
O00370 Y_RNA.210-201ENST00000364161 110 ntBASIC1.48□□□□□ -2.17
O00370 Y_RNA.265-201ENST00000364677 108 ntBASIC1.48□□□□□ -2.17
O00370 RNU6-203P-201ENST00000384038 104 ntBASIC1.48□□□□□ -2.17
O00370 SNORD116-13-201ENST00000384408 92 ntBASIC1.48□□□□□ -2.17
O00370 Y_RNA.551-201ENST00000384661 102 ntBASIC1.48□□□□□ -2.17
O00370 RNU6-440P-201ENST00000390882 105 ntBASIC1.48□□□□□ -2.17
O00370 RNU6-360P-201ENST00000390944 104 ntBASIC1.48□□□□□ -2.17
O00370 RNU6-1199P-201ENST00000411249 104 ntBASIC1.48□□□□□ -2.17
O00370 AC005534.2-201ENST00000431047 433 ntBASIC1.48□□□□□ -2.17
O00370 FTH1P12-201ENST00000432137 551 ntBASIC1.48□□□□□ -2.17
O00370 AL135790.2-201ENST00000437701 267 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms