Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RNU6-867P-201ENST00000364956 107 ntBASIC1.35□□□□□ -2.19
NPIPA3F8WFD2 RNU1-115P-201ENST00000365329 160 ntBASIC1.35□□□□□ -2.19
NPIPA3F8WFD2 RNA5SP511-201ENST00000410487 115 ntBASIC1.35□□□□□ -2.19
NPIPA3F8WFD2 RPS27P16-201ENST00000425758 201 ntBASIC1.35□□□□□ -2.19
NPIPA3F8WFD2 AL354695.1-201ENST00000427935 228 ntBASIC1.35□□□□□ -2.19
NPIPA3F8WFD2 RPEP5-201ENST00000441137 268 ntBASIC1.35□□□□□ -2.19
NPIPA3F8WFD2 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.35□□□□□ -2.19
NPIPA3F8WFD2 AC245517.4-201ENST00000448601 281 ntBASIC1.35□□□□□ -2.19
NPIPA3F8WFD2 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.35□□□□□ -2.19
NPIPA3F8WFD2 SNORA70.12-201ENST00000516084 153 ntBASIC1.35□□□□□ -2.19
NPIPA3F8WFD2 RNU6-966P-201ENST00000516479 104 ntBASIC1.35□□□□□ -2.19
NPIPA3F8WFD2 RNU6-1337P-201ENST00000516525 95 ntBASIC1.35□□□□□ -2.19
NPIPA3F8WFD2 AL161670.1-201ENST00000554348 137 ntBASIC1.35□□□□□ -2.19
NPIPA3F8WFD2 SNORA28-201ENST00000606769 126 ntBASIC1.35□□□□□ -2.19
NPIPA3F8WFD2 AC073349.3-201ENST00000617616 186 ntBASIC1.35□□□□□ -2.19
NPIPA3F8WFD2 SNORD3E-202ENST00000627253 216 ntBASIC1.35□□□□□ -2.19
NPIPA3F8WFD2 MIR369-201ENST00000362155 70 ntBASIC1.34□□□□□ -2.19
NPIPA3F8WFD2 SNORD114-7-201ENST00000362520 77 ntBASIC1.34□□□□□ -2.19
NPIPA3F8WFD2 SNORA1B-201ENST00000362535 133 ntBASIC1.34□□□□□ -2.19
NPIPA3F8WFD2 SNORA7.1-201ENST00000363750 139 ntBASIC1.34□□□□□ -2.19
NPIPA3F8WFD2 RNU5E-4P-201ENST00000364931 120 ntBASIC1.34□□□□□ -2.19
NPIPA3F8WFD2 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.34□□□□□ -2.19
NPIPA3F8WFD2 RNY1P14-201ENST00000384426 108 ntBASIC1.34□□□□□ -2.19
NPIPA3F8WFD2 MIR562-201ENST00000384894 95 ntBASIC1.34□□□□□ -2.19
NPIPA3F8WFD2 RNU6-1199P-201ENST00000411249 104 ntBASIC1.34□□□□□ -2.19
NPIPA3F8WFD2 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.34□□□□□ -2.19
NPIPA3F8WFD2 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.34□□□□□ -2.19
NPIPA3F8WFD2 RNU6-1096P-201ENST00000517089 102 ntBASIC1.34□□□□□ -2.19
NPIPA3F8WFD2 AL160236.1-201ENST00000556317 195 ntBASIC1.34□□□□□ -2.19
NPIPA3F8WFD2 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.34□□□□□ -2.19
NPIPA3F8WFD2 AC007485.1-201ENST00000616755 206 ntBASIC1.34□□□□□ -2.19
NPIPA3F8WFD2 AL138825.1-201ENST00000618587 192 ntBASIC1.34□□□□□ -2.19
NPIPA3F8WFD2 AL121890.5-201ENST00000620848 304 ntBASIC1.34□□□□□ -2.19
NPIPA3F8WFD2 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
NPIPA3F8WFD2 RNU4-13P-201ENST00000364019 141 ntBASIC1.33□□□□□ -2.2
NPIPA3F8WFD2 Y_RNA.230-201ENST00000364348 109 ntBASIC1.33□□□□□ -2.2
NPIPA3F8WFD2 Y_RNA.813-201ENST00000364639 102 ntBASIC1.33□□□□□ -2.2
NPIPA3F8WFD2 RNU6-1175P-201ENST00000365200 107 ntBASIC1.33□□□□□ -2.2
NPIPA3F8WFD2 Y_RNA.431-201ENST00000384086 102 ntBASIC1.33□□□□□ -2.2
NPIPA3F8WFD2 RNU6-1065P-201ENST00000384513 106 ntBASIC1.33□□□□□ -2.2
NPIPA3F8WFD2 SNX2P2-201ENST00000424553 323 ntBASIC1.33□□□□□ -2.2
NPIPA3F8WFD2 RNU6-436P-201ENST00000516171 114 ntBASIC1.33□□□□□ -2.2
NPIPA3F8WFD2 SNORA40.14-201ENST00000516543 86 ntBASIC1.33□□□□□ -2.2
NPIPA3F8WFD2 AP002004.2-201ENST00000531656 154 ntBASIC1.33□□□□□ -2.2
NPIPA3F8WFD2 MIR4778-201ENST00000577635 80 ntBASIC1.33□□□□□ -2.2
NPIPA3F8WFD2 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.33□□□□□ -2.2
NPIPA3F8WFD2 Y_RNA.772-201ENST00000606692 102 ntBASIC1.33□□□□□ -2.2
NPIPA3F8WFD2 AL078604.3-201ENST00000615580 211 ntBASIC1.33□□□□□ -2.2
NPIPA3F8WFD2 AL513423.1-201ENST00000621695 132 ntBASIC1.33□□□□□ -2.2
NPIPA3F8WFD2 AC106754.2-201ENST00000623006 233 ntBASIC1.33□□□□□ -2.2
NPIPA3F8WFD2 AC005592.1-201ENST00000566527 1640 ntBASIC1.33□□□□□ -2.2
NPIPA3F8WFD2 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
NPIPA3F8WFD2 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
NPIPA3F8WFD2 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
NPIPA3F8WFD2 RNY1P10-201ENST00000363268 113 ntBASIC1.32□□□□□ -2.2
NPIPA3F8WFD2 Y_RNA.361-201ENST00000365515 120 ntBASIC1.32□□□□□ -2.2
NPIPA3F8WFD2 Y_RNA.458-201ENST00000384240 102 ntBASIC1.32□□□□□ -2.2
NPIPA3F8WFD2 MIR520G-201ENST00000385064 90 ntBASIC1.32□□□□□ -2.2
NPIPA3F8WFD2 RNU6-308P-201ENST00000390957 107 ntBASIC1.32□□□□□ -2.2
NPIPA3F8WFD2 RN7SKP51-201ENST00000410781 304 ntBASIC1.32□□□□□ -2.2
NPIPA3F8WFD2 RNU5A-5P-201ENST00000411054 116 ntBASIC1.32□□□□□ -2.2
NPIPA3F8WFD2 AL354751.2-201ENST00000415471 210 ntBASIC1.32□□□□□ -2.2
NPIPA3F8WFD2 CALM2P4-201ENST00000430810 426 ntBASIC1.32□□□□□ -2.2
NPIPA3F8WFD2 AL049830.1-201ENST00000468034 425 ntBASIC1.32□□□□□ -2.2
NPIPA3F8WFD2 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.32□□□□□ -2.2
NPIPA3F8WFD2 RNA5SP168-201ENST00000516642 112 ntBASIC1.32□□□□□ -2.2
NPIPA3F8WFD2 RN7SKP295-201ENST00000517264 153 ntBASIC1.32□□□□□ -2.2
NPIPA3F8WFD2 MIR4421-201ENST00000578133 69 ntBASIC1.32□□□□□ -2.2
NPIPA3F8WFD2 AC022441.3-201ENST00000605737 136 ntBASIC1.32□□□□□ -2.2
NPIPA3F8WFD2 AL161722.3-201ENST00000605789 2983 ntBASIC1.32□□□□□ -2.2
NPIPA3F8WFD2 AL157834.3-201ENST00000615543 103 ntBASIC1.32□□□□□ -2.2
NPIPA3F8WFD2 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.32□□□□□ -2.2
NPIPA3F8WFD2 uc_338.22-201ENST00000622722 187 ntBASIC1.32□□□□□ -2.2
NPIPA3F8WFD2 AC091812.1-201ENST00000432235 1948 ntBASIC1.32□□□□□ -2.2
NPIPA3F8WFD2 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.32□□□□□ -2.2
NPIPA3F8WFD2 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
NPIPA3F8WFD2 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.31□□□□□ -2.2
NPIPA3F8WFD2 Y_RNA.327-201ENST00000365201 102 ntBASIC1.31□□□□□ -2.2
NPIPA3F8WFD2 Y_RNA.509-201ENST00000384506 99 ntBASIC1.31□□□□□ -2.2
NPIPA3F8WFD2 Y_RNA.621-201ENST00000411065 96 ntBASIC1.31□□□□□ -2.2
NPIPA3F8WFD2 SNRPGP13-201ENST00000442212 177 ntBASIC1.31□□□□□ -2.2
NPIPA3F8WFD2 HSPE1P13-201ENST00000451143 297 ntBASIC1.31□□□□□ -2.2
NPIPA3F8WFD2 OR9P1P-201ENST00000496431 281 ntBASIC1.31□□□□□ -2.2
NPIPA3F8WFD2 RNU7-28P-201ENST00000516759 62 ntBASIC1.31□□□□□ -2.2
NPIPA3F8WFD2 C8orf59P2-201ENST00000603441 271 ntBASIC1.31□□□□□ -2.2
NPIPA3F8WFD2 AL050343.2-201ENST00000607338 280 ntBASIC1.31□□□□□ -2.2
NPIPA3F8WFD2 AC010205.1-201ENST00000616668 449 ntBASIC1.31□□□□□ -2.2
NPIPA3F8WFD2 AC090971.5-201ENST00000621102 293 ntBASIC1.31□□□□□ -2.2
NPIPA3F8WFD2 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
NPIPA3F8WFD2 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
NPIPA3F8WFD2 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
NPIPA3F8WFD2 Y_RNA.112-201ENST00000363250 102 ntBASIC1.3□□□□□ -2.2
NPIPA3F8WFD2 Y_RNA.172-201ENST00000363765 102 ntBASIC1.3□□□□□ -2.2
NPIPA3F8WFD2 Y_RNA.329-201ENST00000365209 107 ntBASIC1.3□□□□□ -2.2
NPIPA3F8WFD2 SNORD116-13-201ENST00000384408 92 ntBASIC1.3□□□□□ -2.2
NPIPA3F8WFD2 Y_RNA.570-201ENST00000384750 101 ntBASIC1.3□□□□□ -2.2
NPIPA3F8WFD2 MIR660-201ENST00000385235 97 ntBASIC1.3□□□□□ -2.2
NPIPA3F8WFD2 U8.16-201ENST00000391279 133 ntBASIC1.3□□□□□ -2.2
NPIPA3F8WFD2 AL162725.1-201ENST00000435405 301 ntBASIC1.3□□□□□ -2.2
NPIPA3F8WFD2 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms