Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.14□□□□□ -2.07
MBD3L4A6NDZ8 RNU7-115P-201ENST00000516433 55 ntBASIC2.14□□□□□ -2.07
MBD3L4A6NDZ8 RNU6-1291P-201ENST00000516591 104 ntBASIC2.14□□□□□ -2.07
MBD3L4A6NDZ8 RNU7-116P-201ENST00000516940 62 ntBASIC2.14□□□□□ -2.07
MBD3L4A6NDZ8 Y_RNA.777-201ENST00000516982 102 ntBASIC2.14□□□□□ -2.07
MBD3L4A6NDZ8 RNU6-388P-201ENST00000517012 105 ntBASIC2.14□□□□□ -2.07
MBD3L4A6NDZ8 RNU6-389P-201ENST00000517048 105 ntBASIC2.14□□□□□ -2.07
MBD3L4A6NDZ8 RNU6-111P-201ENST00000517179 105 ntBASIC2.14□□□□□ -2.07
MBD3L4A6NDZ8 IGKV3-31-201ENST00000523109 329 ntBASIC2.14□□□□□ -2.07
MBD3L4A6NDZ8 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.14□□□□□ -2.07
MBD3L4A6NDZ8 AC024405.2-202ENST00000532731 184 ntBASIC2.14□□□□□ -2.07
MBD3L4A6NDZ8 POLR3GP1-201ENST00000594073 261 ntBASIC2.14□□□□□ -2.07
MBD3L4A6NDZ8 Y_RNA.771-201ENST00000598668 102 ntBASIC2.14□□□□□ -2.07
MBD3L4A6NDZ8 AL049779.4-201ENST00000604500 156 ntBASIC2.14□□□□□ -2.07
MBD3L4A6NDZ8 AC242852.1-201ENST00000612151 96 ntBASIC2.14□□□□□ -2.07
MBD3L4A6NDZ8 AC244015.1-201ENST00000622301 99 ntBASIC2.14□□□□□ -2.07
MBD3L4A6NDZ8 Y_RNA.789-201ENST00000622480 102 ntBASIC2.14□□□□□ -2.07
MBD3L4A6NDZ8 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
MBD3L4A6NDZ8 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
MBD3L4A6NDZ8 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
MBD3L4A6NDZ8 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
MBD3L4A6NDZ8 Y_RNA.122-201ENST00000363331 96 ntBASIC2.13□□□□□ -2.07
MBD3L4A6NDZ8 U8.7-201ENST00000364940 136 ntBASIC2.13□□□□□ -2.07
MBD3L4A6NDZ8 RNU6-338P-201ENST00000383888 105 ntBASIC2.13□□□□□ -2.07
MBD3L4A6NDZ8 RNU6-1323P-201ENST00000384025 107 ntBASIC2.13□□□□□ -2.07
MBD3L4A6NDZ8 RNA5SP109-201ENST00000391010 116 ntBASIC2.13□□□□□ -2.07
MBD3L4A6NDZ8 RN7SKP223-201ENST00000410582 62 ntBASIC2.13□□□□□ -2.07
MBD3L4A6NDZ8 AC245047.3-201ENST00000429428 127 ntBASIC2.13□□□□□ -2.07
MBD3L4A6NDZ8 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.13□□□□□ -2.07
MBD3L4A6NDZ8 RPL23AP54-201ENST00000495129 419 ntBASIC2.13□□□□□ -2.07
MBD3L4A6NDZ8 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.13□□□□□ -2.07
MBD3L4A6NDZ8 SUB1P4-201ENST00000566062 339 ntBASIC2.13□□□□□ -2.07
MBD3L4A6NDZ8 MIR4287-201ENST00000579398 78 ntBASIC2.13□□□□□ -2.07
MBD3L4A6NDZ8 AC005357.1-201ENST00000588399 301 ntBASIC2.13□□□□□ -2.07
MBD3L4A6NDZ8 AC013791.1-201ENST00000616619 62 ntBASIC2.13□□□□□ -2.07
MBD3L4A6NDZ8 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.13□□□□□ -2.07
MBD3L4A6NDZ8 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
MBD3L4A6NDZ8 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
MBD3L4A6NDZ8 RNU6-1205P-201ENST00000363625 106 ntBASIC2.12□□□□□ -2.07
MBD3L4A6NDZ8 Y_RNA.293-201ENST00000364908 93 ntBASIC2.12□□□□□ -2.07
MBD3L4A6NDZ8 MIR520A-201ENST00000384862 85 ntBASIC2.12□□□□□ -2.07
MBD3L4A6NDZ8 AL606517.2-201ENST00000442855 241 ntBASIC2.12□□□□□ -2.07
MBD3L4A6NDZ8 RPS27AP9-201ENST00000477681 438 ntBASIC2.12□□□□□ -2.07
MBD3L4A6NDZ8 AC026436.1-201ENST00000510537 270 ntBASIC2.12□□□□□ -2.07
MBD3L4A6NDZ8 RNA5SP76-201ENST00000516277 87 ntBASIC2.12□□□□□ -2.07
MBD3L4A6NDZ8 RNU6-826P-201ENST00000516827 104 ntBASIC2.12□□□□□ -2.07
MBD3L4A6NDZ8 RNU6-341P-201ENST00000516973 96 ntBASIC2.12□□□□□ -2.07
MBD3L4A6NDZ8 AC011604.1-201ENST00000545978 196 ntBASIC2.12□□□□□ -2.07
MBD3L4A6NDZ8 MIR5692C2-201ENST00000577959 77 ntBASIC2.12□□□□□ -2.07
MBD3L4A6NDZ8 AC091178.2-201ENST00000584401 117 ntBASIC2.12□□□□□ -2.07
MBD3L4A6NDZ8 AP003357.1-201ENST00000604497 148 ntBASIC2.12□□□□□ -2.07
MBD3L4A6NDZ8 AC046143.2-201ENST00000609789 160 ntBASIC2.12□□□□□ -2.07
MBD3L4A6NDZ8 AL442067.1-201ENST00000613261 223 ntBASIC2.12□□□□□ -2.07
MBD3L4A6NDZ8 AC073349.3-201ENST00000617616 186 ntBASIC2.12□□□□□ -2.07
MBD3L4A6NDZ8 AC078938.1-201ENST00000620993 318 ntBASIC2.12□□□□□ -2.07
MBD3L4A6NDZ8 MIR203B-201ENST00000636080 86 ntBASIC2.12□□□□□ -2.07
MBD3L4A6NDZ8 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.12□□□□□ -2.07
MBD3L4A6NDZ8 Y_RNA.76-201ENST00000362931 109 ntBASIC2.11□□□□□ -2.07
MBD3L4A6NDZ8 Y_RNA.552-201ENST00000384665 112 ntBASIC2.11□□□□□ -2.07
MBD3L4A6NDZ8 MIR562-201ENST00000384894 95 ntBASIC2.11□□□□□ -2.07
MBD3L4A6NDZ8 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.11□□□□□ -2.07
MBD3L4A6NDZ8 RPS12P2-201ENST00000439728 269 ntBASIC2.11□□□□□ -2.07
MBD3L4A6NDZ8 SNORD2.1-201ENST00000458762 69 ntBASIC2.11□□□□□ -2.07
MBD3L4A6NDZ8 snoU13.23-201ENST00000458863 104 ntBASIC2.11□□□□□ -2.07
MBD3L4A6NDZ8 SNORD116-28-201ENST00000516123 91 ntBASIC2.11□□□□□ -2.07
MBD3L4A6NDZ8 RNU4-71P-201ENST00000516258 113 ntBASIC2.11□□□□□ -2.07
MBD3L4A6NDZ8 RNU2-56P-201ENST00000516826 190 ntBASIC2.11□□□□□ -2.07
MBD3L4A6NDZ8 AC127455.1-201ENST00000565496 145 ntBASIC2.11□□□□□ -2.07
MBD3L4A6NDZ8 MIR3671-201ENST00000580455 88 ntBASIC2.11□□□□□ -2.07
MBD3L4A6NDZ8 AC022217.4-201ENST00000604389 163 ntBASIC2.11□□□□□ -2.07
MBD3L4A6NDZ8 AC067747.1-201ENST00000608026 250 ntBASIC2.11□□□□□ -2.07
MBD3L4A6NDZ8 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.11□□□□□ -2.07
MBD3L4A6NDZ8 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
MBD3L4A6NDZ8 AC080100.1-201ENST00000624239 5356 ntBASIC2.1□□□□□ -2.07
MBD3L4A6NDZ8 Z82195.2-201ENST00000612348 18351 ntBASIC2.1□□□□□ -2.07
MBD3L4A6NDZ8 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
MBD3L4A6NDZ8 RNU6-112P-201ENST00000363599 104 ntBASIC2.1□□□□□ -2.07
MBD3L4A6NDZ8 SNORA72-201ENST00000384339 132 ntBASIC2.1□□□□□ -2.07
MBD3L4A6NDZ8 Y_RNA.515-201ENST00000384535 112 ntBASIC2.1□□□□□ -2.07
MBD3L4A6NDZ8 SNORA36B-201ENST00000410438 131 ntBASIC2.1□□□□□ -2.07
MBD3L4A6NDZ8 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.1□□□□□ -2.07
MBD3L4A6NDZ8 RNA5SP281-201ENST00000516504 135 ntBASIC2.1□□□□□ -2.07
MBD3L4A6NDZ8 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.1□□□□□ -2.07
MBD3L4A6NDZ8 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.1□□□□□ -2.07
MBD3L4A6NDZ8 MIR5007-201ENST00000583098 95 ntBASIC2.1□□□□□ -2.07
MBD3L4A6NDZ8 MIR4282-201ENST00000583613 67 ntBASIC2.1□□□□□ -2.07
MBD3L4A6NDZ8 AC090425.1-201ENST00000610007 140 ntBASIC2.1□□□□□ -2.07
MBD3L4A6NDZ8 Y_RNA.292-201ENST00000364904 97 ntBASIC2.09□□□□□ -2.07
MBD3L4A6NDZ8 RNU6-1080P-201ENST00000383982 107 ntBASIC2.09□□□□□ -2.07
MBD3L4A6NDZ8 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
MBD3L4A6NDZ8 AL512604.1-201ENST00000404812 257 ntBASIC2.09□□□□□ -2.07
MBD3L4A6NDZ8 AL355497.1-201ENST00000406262 551 ntBASIC2.09□□□□□ -2.07
MBD3L4A6NDZ8 MIR1289-2-201ENST00000408360 111 ntBASIC2.09□□□□□ -2.07
MBD3L4A6NDZ8 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.09□□□□□ -2.07
MBD3L4A6NDZ8 RNA5SP100-201ENST00000410903 110 ntBASIC2.09□□□□□ -2.07
MBD3L4A6NDZ8 RNA5SP59-201ENST00000410922 110 ntBASIC2.09□□□□□ -2.07
MBD3L4A6NDZ8 RPL23AP63-201ENST00000498752 471 ntBASIC2.09□□□□□ -2.07
MBD3L4A6NDZ8 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.09□□□□□ -2.07
MBD3L4A6NDZ8 AC015712.3-201ENST00000559380 164 ntBASIC2.09□□□□□ -2.07
MBD3L4A6NDZ8 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 155.9 ms