Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.75□□□□□ -2.13
CCDC196A0A1B0GTZ2 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.75□□□□□ -2.13
CCDC196A0A1B0GTZ2 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.75□□□□□ -2.13
CCDC196A0A1B0GTZ2 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.74□□□□□ -2.13
CCDC196A0A1B0GTZ2 SNORA1B-201ENST00000362535 133 ntBASIC1.74□□□□□ -2.13
CCDC196A0A1B0GTZ2 RNU1-17P-201ENST00000363022 152 ntBASIC1.74□□□□□ -2.13
CCDC196A0A1B0GTZ2 Y_RNA.128-201ENST00000363391 112 ntBASIC1.74□□□□□ -2.13
CCDC196A0A1B0GTZ2 RNU4-13P-201ENST00000364019 141 ntBASIC1.74□□□□□ -2.13
CCDC196A0A1B0GTZ2 RNU6-60P-201ENST00000364792 103 ntBASIC1.74□□□□□ -2.13
CCDC196A0A1B0GTZ2 SNORA22B-201ENST00000383876 138 ntBASIC1.74□□□□□ -2.13
CCDC196A0A1B0GTZ2 SNORD116-13-201ENST00000384408 92 ntBASIC1.74□□□□□ -2.13
CCDC196A0A1B0GTZ2 RNU6-21P-201ENST00000384710 107 ntBASIC1.74□□□□□ -2.13
CCDC196A0A1B0GTZ2 MIR513A1-201ENST00000385138 129 ntBASIC1.74□□□□□ -2.13
CCDC196A0A1B0GTZ2 MIR548P-201ENST00000408336 84 ntBASIC1.74□□□□□ -2.13
CCDC196A0A1B0GTZ2 RNU5A-5P-201ENST00000411054 116 ntBASIC1.74□□□□□ -2.13
CCDC196A0A1B0GTZ2 RNU6-130P-201ENST00000411112 103 ntBASIC1.74□□□□□ -2.13
CCDC196A0A1B0GTZ2 AC093852.1-201ENST00000503587 266 ntBASIC1.74□□□□□ -2.13
CCDC196A0A1B0GTZ2 AC108210.2-201ENST00000503681 201 ntBASIC1.74□□□□□ -2.13
CCDC196A0A1B0GTZ2 RNU6-475P-201ENST00000516073 104 ntBASIC1.74□□□□□ -2.13
CCDC196A0A1B0GTZ2 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.74□□□□□ -2.13
CCDC196A0A1B0GTZ2 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.74□□□□□ -2.13
CCDC196A0A1B0GTZ2 AP001485.1-201ENST00000604799 199 ntBASIC1.74□□□□□ -2.13
CCDC196A0A1B0GTZ2 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.74□□□□□ -2.13
CCDC196A0A1B0GTZ2 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
CCDC196A0A1B0GTZ2 Y_RNA.172-201ENST00000363765 102 ntBASIC1.73□□□□□ -2.13
CCDC196A0A1B0GTZ2 MIR194-1-201ENST00000384892 85 ntBASIC1.73□□□□□ -2.13
CCDC196A0A1B0GTZ2 Y_RNA.645-201ENST00000391229 102 ntBASIC1.73□□□□□ -2.13
CCDC196A0A1B0GTZ2 RNU6-101P-201ENST00000410323 104 ntBASIC1.73□□□□□ -2.13
CCDC196A0A1B0GTZ2 RPL23AP36-201ENST00000413895 458 ntBASIC1.73□□□□□ -2.13
CCDC196A0A1B0GTZ2 AL354751.2-201ENST00000415471 210 ntBASIC1.73□□□□□ -2.13
CCDC196A0A1B0GTZ2 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.73□□□□□ -2.13
CCDC196A0A1B0GTZ2 RNU6-1046P-201ENST00000516538 107 ntBASIC1.73□□□□□ -2.13
CCDC196A0A1B0GTZ2 RNU6-341P-201ENST00000516973 96 ntBASIC1.73□□□□□ -2.13
CCDC196A0A1B0GTZ2 MIR3937-201ENST00000580135 106 ntBASIC1.73□□□□□ -2.13
CCDC196A0A1B0GTZ2 AC091178.2-201ENST00000584401 117 ntBASIC1.73□□□□□ -2.13
CCDC196A0A1B0GTZ2 AC134503.1-201ENST00000633048 54 ntBASIC1.73□□□□□ -2.13
CCDC196A0A1B0GTZ2 SNORD1A-201ENST00000364968 72 ntBASIC1.72□□□□□ -2.13
CCDC196A0A1B0GTZ2 SNORA12.1-201ENST00000390873 148 ntBASIC1.72□□□□□ -2.13
CCDC196A0A1B0GTZ2 MIR1323-201ENST00000408090 73 ntBASIC1.72□□□□□ -2.13
CCDC196A0A1B0GTZ2 AL161935.2-201ENST00000414627 60 ntBASIC1.72□□□□□ -2.13
CCDC196A0A1B0GTZ2 PGBD4P5-201ENST00000445958 426 ntBASIC1.72□□□□□ -2.13
CCDC196A0A1B0GTZ2 AL163540.1-201ENST00000485382 386 ntBASIC1.72□□□□□ -2.13
CCDC196A0A1B0GTZ2 AC079140.2-201ENST00000506193 142 ntBASIC1.72□□□□□ -2.13
CCDC196A0A1B0GTZ2 AC015720.1-201ENST00000565251 277 ntBASIC1.72□□□□□ -2.13
CCDC196A0A1B0GTZ2 MIR4778-201ENST00000577635 80 ntBASIC1.72□□□□□ -2.13
CCDC196A0A1B0GTZ2 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.72□□□□□ -2.13
CCDC196A0A1B0GTZ2 MIR3145-201ENST00000580727 82 ntBASIC1.72□□□□□ -2.13
CCDC196A0A1B0GTZ2 MIR4524B-201ENST00000581569 115 ntBASIC1.72□□□□□ -2.13
CCDC196A0A1B0GTZ2 MIR3171-201ENST00000584270 74 ntBASIC1.72□□□□□ -2.13
CCDC196A0A1B0GTZ2 DEFB117-201ENST00000602356 141 ntBASIC1.72□□□□□ -2.13
CCDC196A0A1B0GTZ2 AC104695.3-201ENST00000604052 296 ntBASIC1.72□□□□□ -2.13
CCDC196A0A1B0GTZ2 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.72□□□□□ -2.13
CCDC196A0A1B0GTZ2 SNORD3E-202ENST00000627253 216 ntBASIC1.72□□□□□ -2.13
CCDC196A0A1B0GTZ2 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CCDC196A0A1B0GTZ2 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.71□□□□□ -2.14
CCDC196A0A1B0GTZ2 RNU6-1080P-201ENST00000383982 107 ntBASIC1.71□□□□□ -2.14
CCDC196A0A1B0GTZ2 MIR520G-201ENST00000385064 90 ntBASIC1.71□□□□□ -2.14
CCDC196A0A1B0GTZ2 MIR320A-201ENST00000385302 82 ntBASIC1.71□□□□□ -2.14
CCDC196A0A1B0GTZ2 RNU6-855P-201ENST00000410395 104 ntBASIC1.71□□□□□ -2.14
CCDC196A0A1B0GTZ2 RNU2-61P-201ENST00000411069 191 ntBASIC1.71□□□□□ -2.14
CCDC196A0A1B0GTZ2 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.71□□□□□ -2.14
CCDC196A0A1B0GTZ2 RNU6-1153P-201ENST00000516760 105 ntBASIC1.71□□□□□ -2.14
CCDC196A0A1B0GTZ2 Y_RNA.713-201ENST00000517013 96 ntBASIC1.71□□□□□ -2.14
CCDC196A0A1B0GTZ2 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.71□□□□□ -2.14
CCDC196A0A1B0GTZ2 AP002004.2-201ENST00000531656 154 ntBASIC1.71□□□□□ -2.14
CCDC196A0A1B0GTZ2 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.71□□□□□ -2.14
CCDC196A0A1B0GTZ2 AC015688.6-201ENST00000577737 104 ntBASIC1.71□□□□□ -2.14
CCDC196A0A1B0GTZ2 MIR4423-201ENST00000580922 80 ntBASIC1.71□□□□□ -2.14
CCDC196A0A1B0GTZ2 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.71□□□□□ -2.14
CCDC196A0A1B0GTZ2 SNORA28-201ENST00000606769 126 ntBASIC1.71□□□□□ -2.14
CCDC196A0A1B0GTZ2 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
CCDC196A0A1B0GTZ2 AC106754.2-201ENST00000623006 233 ntBASIC1.71□□□□□ -2.14
CCDC196A0A1B0GTZ2 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.7□□□□□ -2.14
CCDC196A0A1B0GTZ2 SNORD114-7-201ENST00000362520 77 ntBASIC1.7□□□□□ -2.14
CCDC196A0A1B0GTZ2 RNU1-42P-201ENST00000364033 160 ntBASIC1.7□□□□□ -2.14
CCDC196A0A1B0GTZ2 Y_RNA.361-201ENST00000365515 120 ntBASIC1.7□□□□□ -2.14
CCDC196A0A1B0GTZ2 Y_RNA.462-201ENST00000384268 102 ntBASIC1.7□□□□□ -2.14
CCDC196A0A1B0GTZ2 Y_RNA.551-201ENST00000384661 102 ntBASIC1.7□□□□□ -2.14
CCDC196A0A1B0GTZ2 RNU6-823P-201ENST00000391042 103 ntBASIC1.7□□□□□ -2.14
CCDC196A0A1B0GTZ2 AL390729.2-201ENST00000416137 156 ntBASIC1.7□□□□□ -2.14
CCDC196A0A1B0GTZ2 AL354695.1-201ENST00000427935 228 ntBASIC1.7□□□□□ -2.14
CCDC196A0A1B0GTZ2 CALM2P4-201ENST00000430810 426 ntBASIC1.7□□□□□ -2.14
CCDC196A0A1B0GTZ2 AL049830.1-201ENST00000468034 425 ntBASIC1.7□□□□□ -2.14
CCDC196A0A1B0GTZ2 Y_RNA.711-201ENST00000516993 102 ntBASIC1.7□□□□□ -2.14
CCDC196A0A1B0GTZ2 Y_RNA.715-201ENST00000517082 110 ntBASIC1.7□□□□□ -2.14
CCDC196A0A1B0GTZ2 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC196A0A1B0GTZ2 MIR4422-201ENST00000581938 83 ntBASIC1.7□□□□□ -2.14
CCDC196A0A1B0GTZ2 AL365434.2-201ENST00000607979 234 ntBASIC1.7□□□□□ -2.14
CCDC196A0A1B0GTZ2 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.7□□□□□ -2.14
CCDC196A0A1B0GTZ2 AC073349.3-201ENST00000617616 186 ntBASIC1.7□□□□□ -2.14
CCDC196A0A1B0GTZ2 RNU6-1123P-201ENST00000362347 106 ntBASIC1.69□□□□□ -2.14
CCDC196A0A1B0GTZ2 U8.1-201ENST00000362843 134 ntBASIC1.69□□□□□ -2.14
CCDC196A0A1B0GTZ2 MIR562-201ENST00000384894 95 ntBASIC1.69□□□□□ -2.14
CCDC196A0A1B0GTZ2 RNU6-482P-201ENST00000391068 107 ntBASIC1.69□□□□□ -2.14
CCDC196A0A1B0GTZ2 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.69□□□□□ -2.14
CCDC196A0A1B0GTZ2 RNU6-955P-201ENST00000410497 104 ntBASIC1.69□□□□□ -2.14
CCDC196A0A1B0GTZ2 Y_RNA.602-201ENST00000410535 92 ntBASIC1.69□□□□□ -2.14
CCDC196A0A1B0GTZ2 AL162725.1-201ENST00000435405 301 ntBASIC1.69□□□□□ -2.14
CCDC196A0A1B0GTZ2 RPS4XP11-201ENST00000446897 772 ntBASIC1.69□□□□□ -2.14
CCDC196A0A1B0GTZ2 HSPE1P13-201ENST00000451143 297 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms