Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 RNU6-338P-201ENST00000383888 105 ntBASIC1.41□□□□□ -2.18
TRBV4-1A0A0J9YWV2 MIR934-201ENST00000401241 83 ntBASIC1.41□□□□□ -2.18
TRBV4-1A0A0J9YWV2 RNU6-710P-201ENST00000410424 105 ntBASIC1.41□□□□□ -2.18
TRBV4-1A0A0J9YWV2 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.41□□□□□ -2.18
TRBV4-1A0A0J9YWV2 ELOCP20-201ENST00000422460 345 ntBASIC1.41□□□□□ -2.18
TRBV4-1A0A0J9YWV2 RNU7-34P-201ENST00000459394 64 ntBASIC1.41□□□□□ -2.18
TRBV4-1A0A0J9YWV2 AC131281.1-201ENST00000522984 164 ntBASIC1.41□□□□□ -2.18
TRBV4-1A0A0J9YWV2 AL358944.1-201ENST00000528537 144 ntBASIC1.41□□□□□ -2.18
TRBV4-1A0A0J9YWV2 MIR4255-201ENST00000579351 72 ntBASIC1.41□□□□□ -2.18
TRBV4-1A0A0J9YWV2 AL162424.1-201ENST00000602325 221 ntBASIC1.41□□□□□ -2.18
TRBV4-1A0A0J9YWV2 DEFB117-201ENST00000602356 141 ntBASIC1.41□□□□□ -2.18
TRBV4-1A0A0J9YWV2 AC004832.4-201ENST00000608952 331 ntBASIC1.41□□□□□ -2.18
TRBV4-1A0A0J9YWV2 WWP1P1-201ENST00000466609 2769 ntBASIC1.41□□□□□ -2.18
TRBV4-1A0A0J9YWV2 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
TRBV4-1A0A0J9YWV2 SNORA1B-201ENST00000362535 133 ntBASIC1.4□□□□□ -2.19
TRBV4-1A0A0J9YWV2 SNORD113-8-201ENST00000363497 74 ntBASIC1.4□□□□□ -2.19
TRBV4-1A0A0J9YWV2 MIR504-201ENST00000385065 83 ntBASIC1.4□□□□□ -2.19
TRBV4-1A0A0J9YWV2 MIR1323-201ENST00000408090 73 ntBASIC1.4□□□□□ -2.19
TRBV4-1A0A0J9YWV2 MIR1304-201ENST00000408243 91 ntBASIC1.4□□□□□ -2.19
TRBV4-1A0A0J9YWV2 AC004965.1-201ENST00000413033 213 ntBASIC1.4□□□□□ -2.19
TRBV4-1A0A0J9YWV2 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.4□□□□□ -2.19
TRBV4-1A0A0J9YWV2 RPS4XP11-201ENST00000446897 772 ntBASIC1.4□□□□□ -2.19
TRBV4-1A0A0J9YWV2 RPS20P10-201ENST00000451209 253 ntBASIC1.4□□□□□ -2.19
TRBV4-1A0A0J9YWV2 HSPE1P25-201ENST00000455484 251 ntBASIC1.4□□□□□ -2.19
TRBV4-1A0A0J9YWV2 snoU13.9-201ENST00000458927 103 ntBASIC1.4□□□□□ -2.19
TRBV4-1A0A0J9YWV2 HMGN1P10-201ENST00000474557 553 ntBASIC1.4□□□□□ -2.19
TRBV4-1A0A0J9YWV2 RNU6-496P-201ENST00000516145 99 ntBASIC1.4□□□□□ -2.19
TRBV4-1A0A0J9YWV2 RNU6-970P-201ENST00000516312 107 ntBASIC1.4□□□□□ -2.19
TRBV4-1A0A0J9YWV2 RNU6-1096P-201ENST00000517089 102 ntBASIC1.4□□□□□ -2.19
TRBV4-1A0A0J9YWV2 AP002004.2-201ENST00000531656 154 ntBASIC1.4□□□□□ -2.19
TRBV4-1A0A0J9YWV2 AL442663.2-201ENST00000554385 511 ntBASIC1.4□□□□□ -2.19
TRBV4-1A0A0J9YWV2 AC015688.6-201ENST00000577737 104 ntBASIC1.4□□□□□ -2.19
TRBV4-1A0A0J9YWV2 BX248123.2-201ENST00000606318 124 ntBASIC1.4□□□□□ -2.19
TRBV4-1A0A0J9YWV2 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
TRBV4-1A0A0J9YWV2 RNU6-1123P-201ENST00000362347 106 ntBASIC1.39□□□□□ -2.19
TRBV4-1A0A0J9YWV2 RNU6-770P-201ENST00000363929 105 ntBASIC1.39□□□□□ -2.19
TRBV4-1A0A0J9YWV2 Y_RNA.210-201ENST00000364161 110 ntBASIC1.39□□□□□ -2.19
TRBV4-1A0A0J9YWV2 Y_RNA.267-201ENST00000364679 109 ntBASIC1.39□□□□□ -2.19
TRBV4-1A0A0J9YWV2 Y_RNA.310-201ENST00000365063 113 ntBASIC1.39□□□□□ -2.19
TRBV4-1A0A0J9YWV2 Y_RNA.368-201ENST00000365547 113 ntBASIC1.39□□□□□ -2.19
TRBV4-1A0A0J9YWV2 Y_RNA.383-201ENST00000383855 97 ntBASIC1.39□□□□□ -2.19
TRBV4-1A0A0J9YWV2 Y_RNA.422-201ENST00000384054 114 ntBASIC1.39□□□□□ -2.19
TRBV4-1A0A0J9YWV2 SNORA70B-201ENST00000384210 135 ntBASIC1.39□□□□□ -2.19
TRBV4-1A0A0J9YWV2 RNU6-102P-201ENST00000384485 104 ntBASIC1.39□□□□□ -2.19
TRBV4-1A0A0J9YWV2 RNU6-136P-201ENST00000384663 107 ntBASIC1.39□□□□□ -2.19
TRBV4-1A0A0J9YWV2 Y_RNA.581-201ENST00000391017 97 ntBASIC1.39□□□□□ -2.19
TRBV4-1A0A0J9YWV2 AL034345.1-201ENST00000407768 123 ntBASIC1.39□□□□□ -2.19
TRBV4-1A0A0J9YWV2 LINC01399-202ENST00000458450 244 ntBASIC1.39□□□□□ -2.19
TRBV4-1A0A0J9YWV2 AC023790.1-201ENST00000482174 347 ntBASIC1.39□□□□□ -2.19
TRBV4-1A0A0J9YWV2 RNU6-1291P-201ENST00000516591 104 ntBASIC1.39□□□□□ -2.19
TRBV4-1A0A0J9YWV2 RNU7-28P-201ENST00000516759 62 ntBASIC1.39□□□□□ -2.19
TRBV4-1A0A0J9YWV2 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.39□□□□□ -2.19
TRBV4-1A0A0J9YWV2 SNORA28-201ENST00000606769 126 ntBASIC1.39□□□□□ -2.19
TRBV4-1A0A0J9YWV2 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.39□□□□□ -2.19
TRBV4-1A0A0J9YWV2 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
TRBV4-1A0A0J9YWV2 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
TRBV4-1A0A0J9YWV2 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
TRBV4-1A0A0J9YWV2 Y_RNA.111-201ENST00000363248 100 ntBASIC1.38□□□□□ -2.19
TRBV4-1A0A0J9YWV2 Y_RNA.152-201ENST00000363578 100 ntBASIC1.38□□□□□ -2.19
TRBV4-1A0A0J9YWV2 Y_RNA.456-201ENST00000384232 111 ntBASIC1.38□□□□□ -2.19
TRBV4-1A0A0J9YWV2 Y_RNA.500-201ENST00000384466 111 ntBASIC1.38□□□□□ -2.19
TRBV4-1A0A0J9YWV2 RNU6-1011P-201ENST00000384668 107 ntBASIC1.38□□□□□ -2.19
TRBV4-1A0A0J9YWV2 AL135790.2-201ENST00000437701 267 ntBASIC1.38□□□□□ -2.19
TRBV4-1A0A0J9YWV2 STAG3L5P-204ENST00000443759 179 ntBASIC1.38□□□□□ -2.19
TRBV4-1A0A0J9YWV2 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.38□□□□□ -2.19
TRBV4-1A0A0J9YWV2 OR9P1P-201ENST00000496431 281 ntBASIC1.38□□□□□ -2.19
TRBV4-1A0A0J9YWV2 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
TRBV4-1A0A0J9YWV2 RNU1-41P-201ENST00000516161 162 ntBASIC1.38□□□□□ -2.19
TRBV4-1A0A0J9YWV2 RNU1-48P-201ENST00000516400 162 ntBASIC1.38□□□□□ -2.19
TRBV4-1A0A0J9YWV2 SNORA40.15-201ENST00000516884 107 ntBASIC1.38□□□□□ -2.19
TRBV4-1A0A0J9YWV2 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.38□□□□□ -2.19
TRBV4-1A0A0J9YWV2 MIR3145-201ENST00000580727 82 ntBASIC1.38□□□□□ -2.19
TRBV4-1A0A0J9YWV2 AC005972.2-201ENST00000604690 348 ntBASIC1.38□□□□□ -2.19
TRBV4-1A0A0J9YWV2 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.38□□□□□ -2.19
TRBV4-1A0A0J9YWV2 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.38□□□□□ -2.19
TRBV4-1A0A0J9YWV2 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
TRBV4-1A0A0J9YWV2 MIR126-201ENST00000362291 85 ntBASIC1.37□□□□□ -2.19
TRBV4-1A0A0J9YWV2 RNU4-90P-201ENST00000362773 141 ntBASIC1.37□□□□□ -2.19
TRBV4-1A0A0J9YWV2 Y_RNA.136-201ENST00000363444 102 ntBASIC1.37□□□□□ -2.19
TRBV4-1A0A0J9YWV2 Y_RNA.418-201ENST00000384029 102 ntBASIC1.37□□□□□ -2.19
TRBV4-1A0A0J9YWV2 RNU6-855P-201ENST00000410395 104 ntBASIC1.37□□□□□ -2.19
TRBV4-1A0A0J9YWV2 Y_RNA.602-201ENST00000410535 92 ntBASIC1.37□□□□□ -2.19
TRBV4-1A0A0J9YWV2 AC024067.1-201ENST00000426199 223 ntBASIC1.37□□□□□ -2.19
TRBV4-1A0A0J9YWV2 POLR2KP2-201ENST00000438155 177 ntBASIC1.37□□□□□ -2.19
TRBV4-1A0A0J9YWV2 RNU6-1143P-201ENST00000516125 104 ntBASIC1.37□□□□□ -2.19
TRBV4-1A0A0J9YWV2 RNU2-56P-201ENST00000516826 190 ntBASIC1.37□□□□□ -2.19
TRBV4-1A0A0J9YWV2 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.37□□□□□ -2.19
TRBV4-1A0A0J9YWV2 MIR4513-201ENST00000581077 86 ntBASIC1.37□□□□□ -2.19
TRBV4-1A0A0J9YWV2 Y_RNA.812-201ENST00000610788 101 ntBASIC1.37□□□□□ -2.19
TRBV4-1A0A0J9YWV2 Y_RNA.784-201ENST00000613803 101 ntBASIC1.37□□□□□ -2.19
TRBV4-1A0A0J9YWV2 Y_RNA.787-201ENST00000616522 101 ntBASIC1.37□□□□□ -2.19
TRBV4-1A0A0J9YWV2 Y_RNA.780-201ENST00000617336 101 ntBASIC1.37□□□□□ -2.19
TRBV4-1A0A0J9YWV2 Y_RNA.801-201ENST00000619005 101 ntBASIC1.37□□□□□ -2.19
TRBV4-1A0A0J9YWV2 AL513423.1-201ENST00000621695 132 ntBASIC1.37□□□□□ -2.19
TRBV4-1A0A0J9YWV2 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
TRBV4-1A0A0J9YWV2 ICE2P2-201ENST00000483823 2787 ntBASIC1.36□□□□□ -2.19
TRBV4-1A0A0J9YWV2 AP000648.3-201ENST00000623539 4507 ntBASIC1.36□□□□□ -2.19
TRBV4-1A0A0J9YWV2 Y_RNA.19-201ENST00000362462 99 ntBASIC1.36□□□□□ -2.19
TRBV4-1A0A0J9YWV2 Y_RNA.26-201ENST00000362539 101 ntBASIC1.36□□□□□ -2.19
TRBV4-1A0A0J9YWV2 snoU2_19.2-201ENST00000363024 80 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms