Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RPS29P24-201ENST00000486345 171 ntBASIC3.39□□□□□ -1.87
PCDHGA11Q9Y5H2 AL163195.1-201ENST00000496941 348 ntBASIC3.39□□□□□ -1.87
PCDHGA11Q9Y5H2 SNORA70.19-201ENST00000516717 90 ntBASIC3.39□□□□□ -1.87
PCDHGA11Q9Y5H2 SCARNA15-202ENST00000516881 127 ntBASIC3.39□□□□□ -1.87
PCDHGA11Q9Y5H2 AC007012.1-201ENST00000567192 175 ntBASIC3.39□□□□□ -1.87
PCDHGA11Q9Y5H2 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHGA11Q9Y5H2 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHGA11Q9Y5H2 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHGA11Q9Y5H2 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHGA11Q9Y5H2 RNU6-461P-201ENST00000364195 107 ntBASIC3.38□□□□□ -1.87
PCDHGA11Q9Y5H2 snoU2-30.1-201ENST00000365012 70 ntBASIC3.38□□□□□ -1.87
PCDHGA11Q9Y5H2 AL117342.1-201ENST00000404861 406 ntBASIC3.38□□□□□ -1.87
PCDHGA11Q9Y5H2 MIR548O-201ENST00000408583 114 ntBASIC3.38□□□□□ -1.87
PCDHGA11Q9Y5H2 RNU7-70P-201ENST00000516941 66 ntBASIC3.38□□□□□ -1.87
PCDHGA11Q9Y5H2 RNA5SP380-201ENST00000517190 98 ntBASIC3.38□□□□□ -1.87
PCDHGA11Q9Y5H2 AC006441.5-201ENST00000612680 209 ntBASIC3.38□□□□□ -1.87
PCDHGA11Q9Y5H2 U4atac.1-201ENST00000618345 95 ntBASIC3.38□□□□□ -1.87
PCDHGA11Q9Y5H2 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHGA11Q9Y5H2 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.37□□□□□ -1.87
PCDHGA11Q9Y5H2 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHGA11Q9Y5H2 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
PCDHGA11Q9Y5H2 RNA5SP479-201ENST00000364858 117 ntBASIC3.37□□□□□ -1.87
PCDHGA11Q9Y5H2 RNU6-1189P-201ENST00000383958 107 ntBASIC3.37□□□□□ -1.87
PCDHGA11Q9Y5H2 RN7SKP284-201ENST00000411002 343 ntBASIC3.37□□□□□ -1.87
PCDHGA11Q9Y5H2 CALM2P4-201ENST00000430810 426 ntBASIC3.37□□□□□ -1.87
PCDHGA11Q9Y5H2 RPL23AP67-201ENST00000465341 474 ntBASIC3.37□□□□□ -1.87
PCDHGA11Q9Y5H2 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHGA11Q9Y5H2 RPS26P48-201ENST00000491713 339 ntBASIC3.37□□□□□ -1.87
PCDHGA11Q9Y5H2 MIR4762-201ENST00000585261 75 ntBASIC3.37□□□□□ -1.87
PCDHGA11Q9Y5H2 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.37□□□□□ -1.87
PCDHGA11Q9Y5H2 CTSLP2-204ENST00000629029 392 ntBASIC3.37□□□□□ -1.87
PCDHGA11Q9Y5H2 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
PCDHGA11Q9Y5H2 MAPK10-362ENST00000641864 4484 ntBASIC3.36□□□□□ -1.87
PCDHGA11Q9Y5H2 AL161912.2-201ENST00000565707 3007 ntBASIC3.36□□□□□ -1.87
PCDHGA11Q9Y5H2 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHGA11Q9Y5H2 MIR450A1-201ENST00000362262 91 ntBASIC3.36□□□□□ -1.87
PCDHGA11Q9Y5H2 RNU6-1107P-201ENST00000364817 104 ntBASIC3.36□□□□□ -1.87
PCDHGA11Q9Y5H2 SNORA2.2-201ENST00000365473 135 ntBASIC3.36□□□□□ -1.87
PCDHGA11Q9Y5H2 Y_RNA.366-201ENST00000365540 102 ntBASIC3.36□□□□□ -1.87
PCDHGA11Q9Y5H2 MIR759-201ENST00000390224 91 ntBASIC3.36□□□□□ -1.87
PCDHGA11Q9Y5H2 RNA5SP482-201ENST00000391269 118 ntBASIC3.36□□□□□ -1.87
PCDHGA11Q9Y5H2 RNU6ATAC-201ENST00000408749 126 ntBASIC3.36□□□□□ -1.87
PCDHGA11Q9Y5H2 CYCSP19-201ENST00000411715 316 ntBASIC3.36□□□□□ -1.87
PCDHGA11Q9Y5H2 CYCSP4-201ENST00000429682 331 ntBASIC3.36□□□□□ -1.87
PCDHGA11Q9Y5H2 AC099677.2-201ENST00000436385 175 ntBASIC3.36□□□□□ -1.87
PCDHGA11Q9Y5H2 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PCDHGA11Q9Y5H2 AC021205.2-201ENST00000480069 347 ntBASIC3.36□□□□□ -1.87
PCDHGA11Q9Y5H2 AC091826.1-201ENST00000514065 313 ntBASIC3.36□□□□□ -1.87
PCDHGA11Q9Y5H2 SNORA72.7-201ENST00000516349 94 ntBASIC3.36□□□□□ -1.87
PCDHGA11Q9Y5H2 RNU7-28P-201ENST00000516759 62 ntBASIC3.36□□□□□ -1.87
PCDHGA11Q9Y5H2 MIR2276-201ENST00000516886 89 ntBASIC3.36□□□□□ -1.87
PCDHGA11Q9Y5H2 AC004486.1-201ENST00000546846 233 ntBASIC3.36□□□□□ -1.87
PCDHGA11Q9Y5H2 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHGA11Q9Y5H2 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
PCDHGA11Q9Y5H2 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
PCDHGA11Q9Y5H2 RNU6-862P-201ENST00000362804 105 ntBASIC3.35□□□□□ -1.87
PCDHGA11Q9Y5H2 SNORA33-201ENST00000363664 130 ntBASIC3.35□□□□□ -1.87
PCDHGA11Q9Y5H2 U8.5-201ENST00000364528 136 ntBASIC3.35□□□□□ -1.87
PCDHGA11Q9Y5H2 Y_RNA.336-201ENST00000365307 109 ntBASIC3.35□□□□□ -1.87
PCDHGA11Q9Y5H2 RNU6-805P-201ENST00000365643 106 ntBASIC3.35□□□□□ -1.87
PCDHGA11Q9Y5H2 AL359837.1-201ENST00000381357 287 ntBASIC3.35□□□□□ -1.87
PCDHGA11Q9Y5H2 SNORA48.8-201ENST00000391324 134 ntBASIC3.35□□□□□ -1.87
PCDHGA11Q9Y5H2 AC107083.1-201ENST00000439643 279 ntBASIC3.35□□□□□ -1.87
PCDHGA11Q9Y5H2 RNU1-95P-201ENST00000516357 160 ntBASIC3.35□□□□□ -1.87
PCDHGA11Q9Y5H2 SNORA70.18-201ENST00000516696 98 ntBASIC3.35□□□□□ -1.87
PCDHGA11Q9Y5H2 RNU1-128P-201ENST00000516704 160 ntBASIC3.35□□□□□ -1.87
PCDHGA11Q9Y5H2 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.35□□□□□ -1.87
PCDHGA11Q9Y5H2 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.35□□□□□ -1.87
PCDHGA11Q9Y5H2 uc_338.28-201ENST00000612082 187 ntBASIC3.35□□□□□ -1.87
PCDHGA11Q9Y5H2 AL121772.2-201ENST00000614331 297 ntBASIC3.35□□□□□ -1.87
PCDHGA11Q9Y5H2 U4.6-201ENST00000621618 127 ntBASIC3.35□□□□□ -1.87
PCDHGA11Q9Y5H2 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.35□□□□□ -1.87
PCDHGA11Q9Y5H2 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.35□□□□□ -1.87
PCDHGA11Q9Y5H2 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
PCDHGA11Q9Y5H2 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.35□□□□□ -1.87
PCDHGA11Q9Y5H2 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.34□□□□□ -1.87
PCDHGA11Q9Y5H2 SNORD115-28-201ENST00000363931 81 ntBASIC3.34□□□□□ -1.87
PCDHGA11Q9Y5H2 SNORD12C-201ENST00000386307 89 ntBASIC3.34□□□□□ -1.87
PCDHGA11Q9Y5H2 SNORA11.4-201ENST00000408823 129 ntBASIC3.34□□□□□ -1.87
PCDHGA11Q9Y5H2 RN7SL297P-201ENST00000483161 293 ntBASIC3.34□□□□□ -1.87
PCDHGA11Q9Y5H2 RNU6-537P-201ENST00000517277 103 ntBASIC3.34□□□□□ -1.87
PCDHGA11Q9Y5H2 AC106754.2-201ENST00000623006 233 ntBASIC3.34□□□□□ -1.87
PCDHGA11Q9Y5H2 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
PCDHGA11Q9Y5H2 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
PCDHGA11Q9Y5H2 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
PCDHGA11Q9Y5H2 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHGA11Q9Y5H2 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
PCDHGA11Q9Y5H2 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHGA11Q9Y5H2 Y_RNA.85-201ENST00000363014 111 ntBASIC3.33□□□□□ -1.88
PCDHGA11Q9Y5H2 Y_RNA.265-201ENST00000364677 108 ntBASIC3.33□□□□□ -1.88
PCDHGA11Q9Y5H2 SNORA73.2-201ENST00000364946 201 ntBASIC3.33□□□□□ -1.88
PCDHGA11Q9Y5H2 SNORA5A-201ENST00000384111 134 ntBASIC3.33□□□□□ -1.88
PCDHGA11Q9Y5H2 RNU6-106P-201ENST00000384405 107 ntBASIC3.33□□□□□ -1.88
PCDHGA11Q9Y5H2 MIR1262-201ENST00000408276 93 ntBASIC3.33□□□□□ -1.88
PCDHGA11Q9Y5H2 RN7SKP111-201ENST00000410349 271 ntBASIC3.33□□□□□ -1.88
PCDHGA11Q9Y5H2 TRIAP1P1-201ENST00000427062 225 ntBASIC3.33□□□□□ -1.88
PCDHGA11Q9Y5H2 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.33□□□□□ -1.88
PCDHGA11Q9Y5H2 Y_RNA.677-201ENST00000516401 85 ntBASIC3.33□□□□□ -1.88
PCDHGA11Q9Y5H2 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDHGA11Q9Y5H2 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms