Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 SNORD92-201ENST00000585078 85 ntBASIC-0.87□□□□□ -2.55
SHANK2Q9UPX8 RNU6-723P-201ENST00000383973 107 ntBASIC-0.88□□□□□ -2.55
SHANK2Q9UPX8 MIR15B-201ENST00000385045 98 ntBASIC-0.88□□□□□ -2.55
SHANK2Q9UPX8 RNA5SP494-201ENST00000410653 129 ntBASIC-0.88□□□□□ -2.55
SHANK2Q9UPX8 MTCO3P19-201ENST00000415864 321 ntBASIC-0.88□□□□□ -2.55
SHANK2Q9UPX8 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-0.88□□□□□ -2.55
SHANK2Q9UPX8 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-0.88□□□□□ -2.55
SHANK2Q9UPX8 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.88□□□□□ -2.55
SHANK2Q9UPX8 AC005178.1-201ENST00000508392 440 ntBASIC-0.88□□□□□ -2.55
SHANK2Q9UPX8 RNU6-685P-201ENST00000517088 95 ntBASIC-0.88□□□□□ -2.55
SHANK2Q9UPX8 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-0.88□□□□□ -2.55
SHANK2Q9UPX8 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-0.88□□□□□ -2.55
SHANK2Q9UPX8 MIR3925-201ENST00000584674 77 ntBASIC-0.88□□□□□ -2.55
SHANK2Q9UPX8 AC139792.3-201ENST00000623525 224 ntBASIC-0.88□□□□□ -2.55
SHANK2Q9UPX8 SCARNA4-201ENST00000629045 128 ntBASIC-0.88□□□□□ -2.55
SHANK2Q9UPX8 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.89□□□□□ -2.55
SHANK2Q9UPX8 RNU5B-2P-201ENST00000363036 113 ntBASIC-0.89□□□□□ -2.55
SHANK2Q9UPX8 SNORA25.7-201ENST00000364375 127 ntBASIC-0.89□□□□□ -2.55
SHANK2Q9UPX8 RNU6-641P-201ENST00000384006 107 ntBASIC-0.89□□□□□ -2.55
SHANK2Q9UPX8 POLR2KP2-201ENST00000438155 177 ntBASIC-0.89□□□□□ -2.55
SHANK2Q9UPX8 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC-0.89□□□□□ -2.55
SHANK2Q9UPX8 AC046134.1-201ENST00000514454 666 ntBASIC-0.89□□□□□ -2.55
SHANK2Q9UPX8 CR383656.4-201ENST00000546909 122 ntBASIC-0.89□□□□□ -2.55
SHANK2Q9UPX8 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.89□□□□□ -2.55
SHANK2Q9UPX8 AC087683.1-201ENST00000591187 441 ntBASIC-0.89□□□□□ -2.55
SHANK2Q9UPX8 AC121334.2-201ENST00000605387 271 ntBASIC-0.89□□□□□ -2.55
SHANK2Q9UPX8 AC091304.10-201ENST00000641554 121 ntBASIC-0.89□□□□□ -2.55
SHANK2Q9UPX8 RNU5B-4P-201ENST00000363508 111 ntBASIC-0.9□□□□□ -2.55
SHANK2Q9UPX8 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.9□□□□□ -2.55
SHANK2Q9UPX8 MIR487A-201ENST00000385009 80 ntBASIC-0.9□□□□□ -2.55
SHANK2Q9UPX8 MIR563-201ENST00000385080 79 ntBASIC-0.9□□□□□ -2.55
SHANK2Q9UPX8 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-0.9□□□□□ -2.55
SHANK2Q9UPX8 EPS15P1-201ENST00000448836 336 ntBASIC-0.9□□□□□ -2.55
SHANK2Q9UPX8 ZNF114P1-201ENST00000453500 292 ntBASIC-0.9□□□□□ -2.55
SHANK2Q9UPX8 MTND1P12-201ENST00000455231 147 ntBASIC-0.9□□□□□ -2.55
SHANK2Q9UPX8 HIF1AP1-201ENST00000553642 175 ntBASIC-0.9□□□□□ -2.55
SHANK2Q9UPX8 NAMPTP3-201ENST00000569273 224 ntBASIC-0.9□□□□□ -2.55
SHANK2Q9UPX8 MIR4441-201ENST00000582623 100 ntBASIC-0.9□□□□□ -2.55
SHANK2Q9UPX8 MIR548AD-201ENST00000584780 82 ntBASIC-0.9□□□□□ -2.55
SHANK2Q9UPX8 SNORD11B-201ENST00000607707 90 ntBASIC-0.9□□□□□ -2.55
SHANK2Q9UPX8 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.9□□□□□ -2.55
SHANK2Q9UPX8 RNU6-376P-201ENST00000384731 106 ntBASIC-0.91□□□□□ -2.55
SHANK2Q9UPX8 MTCO1P20-201ENST00000425366 358 ntBASIC-0.91□□□□□ -2.55
SHANK2Q9UPX8 AL359672.1-201ENST00000442302 409 ntBASIC-0.91□□□□□ -2.55
SHANK2Q9UPX8 RNU7-62P-201ENST00000458856 62 ntBASIC-0.91□□□□□ -2.55
SHANK2Q9UPX8 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.91□□□□□ -2.55
SHANK2Q9UPX8 SNORA18.4-201ENST00000516440 124 ntBASIC-0.91□□□□□ -2.55
SHANK2Q9UPX8 MTND3P13-201ENST00000574391 343 ntBASIC-0.91□□□□□ -2.55
SHANK2Q9UPX8 MIR4264-201ENST00000583520 66 ntBASIC-0.91□□□□□ -2.55
SHANK2Q9UPX8 MIR4436A-201ENST00000585278 85 ntBASIC-0.91□□□□□ -2.55
SHANK2Q9UPX8 RNU6-88P-201ENST00000606801 100 ntBASIC-0.91□□□□□ -2.55
SHANK2Q9UPX8 AC016597.2-201ENST00000613256 341 ntBASIC-0.91□□□□□ -2.55
SHANK2Q9UPX8 AC091948.2-201ENST00000636510 279 ntBASIC-0.91□□□□□ -2.55
SHANK2Q9UPX8 AC010332.2-201ENST00000613083 1904 ntBASIC-0.92□□□□□ -2.56
SHANK2Q9UPX8 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.92□□□□□ -2.56
SHANK2Q9UPX8 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.92□□□□□ -2.56
SHANK2Q9UPX8 RNU6-224P-201ENST00000384055 107 ntBASIC-0.92□□□□□ -2.56
SHANK2Q9UPX8 RNU6-298P-201ENST00000390888 96 ntBASIC-0.92□□□□□ -2.56
SHANK2Q9UPX8 AL355994.1-201ENST00000424379 260 ntBASIC-0.92□□□□□ -2.56
SHANK2Q9UPX8 RPL39P5-202ENST00000512505 151 ntBASIC-0.92□□□□□ -2.56
SHANK2Q9UPX8 RNU6-1178P-201ENST00000516674 107 ntBASIC-0.92□□□□□ -2.56
SHANK2Q9UPX8 RNU6-201P-201ENST00000517100 61 ntBASIC-0.92□□□□□ -2.56
SHANK2Q9UPX8 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.92□□□□□ -2.56
SHANK2Q9UPX8 Z94722.1-201ENST00000604328 474 ntBASIC-0.92□□□□□ -2.56
SHANK2Q9UPX8 uc_338.28-201ENST00000612082 187 ntBASIC-0.92□□□□□ -2.56
SHANK2Q9UPX8 AL445984.1-201ENST00000637834 659 ntBASIC-0.92□□□□□ -2.56
SHANK2Q9UPX8 MTND4P9-201ENST00000507819 1346 ntBASIC-0.92□□□□□ -2.56
SHANK2Q9UPX8 RNU6-715P-201ENST00000365204 103 ntBASIC-0.92□□□□□ -2.56
SHANK2Q9UPX8 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.92□□□□□ -2.56
SHANK2Q9UPX8 RNU6-811P-201ENST00000384069 107 ntBASIC-0.92□□□□□ -2.56
SHANK2Q9UPX8 Y_RNA.576-201ENST00000384781 102 ntBASIC-0.92□□□□□ -2.56
SHANK2Q9UPX8 MTCYBP36-201ENST00000404146 440 ntBASIC-0.92□□□□□ -2.56
SHANK2Q9UPX8 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.92□□□□□ -2.56
SHANK2Q9UPX8 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.92□□□□□ -2.56
SHANK2Q9UPX8 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.92□□□□□ -2.56
SHANK2Q9UPX8 RNU7-185P-201ENST00000459215 60 ntBASIC-0.92□□□□□ -2.56
SHANK2Q9UPX8 RNA5SP47-201ENST00000517230 109 ntBASIC-0.92□□□□□ -2.56
SHANK2Q9UPX8 AC137590.2-201ENST00000619709 240 ntBASIC-0.92□□□□□ -2.56
SHANK2Q9UPX8 RNU6-433P-201ENST00000363216 104 ntBASIC-0.93□□□□□ -2.56
SHANK2Q9UPX8 RNU6-560P-201ENST00000364007 108 ntBASIC-0.93□□□□□ -2.56
SHANK2Q9UPX8 RNU6-609P-201ENST00000365459 107 ntBASIC-0.93□□□□□ -2.56
SHANK2Q9UPX8 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.93□□□□□ -2.56
SHANK2Q9UPX8 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.93□□□□□ -2.56
SHANK2Q9UPX8 ELOCP21-201ENST00000412558 336 ntBASIC-0.93□□□□□ -2.56
SHANK2Q9UPX8 AC244250.2-201ENST00000418731 148 ntBASIC-0.93□□□□□ -2.56
SHANK2Q9UPX8 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.93□□□□□ -2.56
SHANK2Q9UPX8 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-0.93□□□□□ -2.56
SHANK2Q9UPX8 AC116562.3-201ENST00000506136 177 ntBASIC-0.93□□□□□ -2.56
SHANK2Q9UPX8 RNU6-334P-201ENST00000517072 102 ntBASIC-0.93□□□□□ -2.56
SHANK2Q9UPX8 AC022616.6-201ENST00000520479 119 ntBASIC-0.93□□□□□ -2.56
SHANK2Q9UPX8 AC068587.4-201ENST00000533893 186 ntBASIC-0.93□□□□□ -2.56
SHANK2Q9UPX8 MIR4324-201ENST00000584846 72 ntBASIC-0.93□□□□□ -2.56
SHANK2Q9UPX8 AF250324.2-201ENST00000608299 610 ntBASIC-0.93□□□□□ -2.56
SHANK2Q9UPX8 AL590491.3-201ENST00000610731 82 ntBASIC-0.93□□□□□ -2.56
SHANK2Q9UPX8 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.93□□□□□ -2.56
SHANK2Q9UPX8 RMST_3.1-201ENST00000611651 109 ntBASIC-0.93□□□□□ -2.56
SHANK2Q9UPX8 MIR6738-201ENST00000619620 64 ntBASIC-0.93□□□□□ -2.56
SHANK2Q9UPX8 AC006435.5-201ENST00000624486 112 ntBASIC-0.93□□□□□ -2.56
SHANK2Q9UPX8 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.94□□□□□ -2.56
SHANK2Q9UPX8 SNORA3B-201ENST00000391305 131 ntBASIC-0.94□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms