Protein–RNA interactions for Protein: Q9NV64

TMEM39A, Transmembrane protein 39A, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39AQ9NV64 SNORD109A-201ENST00000459128 67 ntBASIC3.26□□□□□ -1.89
TMEM39AQ9NV64 RNU6-1299P-201ENST00000516316 100 ntBASIC3.26□□□□□ -1.89
TMEM39AQ9NV64 RNA5SP380-201ENST00000517190 98 ntBASIC3.26□□□□□ -1.89
TMEM39AQ9NV64 AC090142.3-201ENST00000519012 385 ntBASIC3.26□□□□□ -1.89
TMEM39AQ9NV64 AC079600.2-201ENST00000550076 130 ntBASIC3.26□□□□□ -1.89
TMEM39AQ9NV64 RPL23AP91-201ENST00000569211 455 ntBASIC3.26□□□□□ -1.89
TMEM39AQ9NV64 MIR2681-201ENST00000581814 105 ntBASIC3.26□□□□□ -1.89
TMEM39AQ9NV64 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.26□□□□□ -1.89
TMEM39AQ9NV64 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
TMEM39AQ9NV64 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
TMEM39AQ9NV64 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.25□□□□□ -1.89
TMEM39AQ9NV64 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TMEM39AQ9NV64 Y_RNA.332-201ENST00000365271 113 ntBASIC3.25□□□□□ -1.89
TMEM39AQ9NV64 RNU6-484P-201ENST00000384016 107 ntBASIC3.25□□□□□ -1.89
TMEM39AQ9NV64 AC245047.4-201ENST00000433189 144 ntBASIC3.25□□□□□ -1.89
TMEM39AQ9NV64 AC023449.1-201ENST00000454464 154 ntBASIC3.25□□□□□ -1.89
TMEM39AQ9NV64 RPS29P21-201ENST00000496272 170 ntBASIC3.25□□□□□ -1.89
TMEM39AQ9NV64 Y_RNA.686-201ENST00000516548 134 ntBASIC3.25□□□□□ -1.89
TMEM39AQ9NV64 SNORA48.11-201ENST00000517015 89 ntBASIC3.25□□□□□ -1.89
TMEM39AQ9NV64 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.25□□□□□ -1.89
TMEM39AQ9NV64 AL356280.1-201ENST00000603614 379 ntBASIC3.25□□□□□ -1.89
TMEM39AQ9NV64 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
TMEM39AQ9NV64 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TMEM39AQ9NV64 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TMEM39AQ9NV64 MIR30E-201ENST00000362104 92 ntBASIC3.24□□□□□ -1.89
TMEM39AQ9NV64 RNU6-1336P-201ENST00000383886 109 ntBASIC3.24□□□□□ -1.89
TMEM39AQ9NV64 RNU2-63P-201ENST00000410792 194 ntBASIC3.24□□□□□ -1.89
TMEM39AQ9NV64 AC245102.2-201ENST00000448956 180 ntBASIC3.24□□□□□ -1.89
TMEM39AQ9NV64 RNU6-856P-201ENST00000516959 98 ntBASIC3.24□□□□□ -1.89
TMEM39AQ9NV64 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
TMEM39AQ9NV64 AC011604.1-201ENST00000545978 196 ntBASIC3.24□□□□□ -1.89
TMEM39AQ9NV64 AL355297.2-201ENST00000604792 129 ntBASIC3.24□□□□□ -1.89
TMEM39AQ9NV64 U7.2-201ENST00000607576 63 ntBASIC3.24□□□□□ -1.89
TMEM39AQ9NV64 U2.20-201ENST00000613956 192 ntBASIC3.24□□□□□ -1.89
TMEM39AQ9NV64 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.24□□□□□ -1.89
TMEM39AQ9NV64 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TMEM39AQ9NV64 RNU6-915P-201ENST00000364943 103 ntBASIC3.23□□□□□ -1.89
TMEM39AQ9NV64 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.23□□□□□ -1.89
TMEM39AQ9NV64 Y_RNA.584-201ENST00000391090 114 ntBASIC3.23□□□□□ -1.89
TMEM39AQ9NV64 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.23□□□□□ -1.89
TMEM39AQ9NV64 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.23□□□□□ -1.89
TMEM39AQ9NV64 AC021205.2-201ENST00000480069 347 ntBASIC3.23□□□□□ -1.89
TMEM39AQ9NV64 AL160236.1-201ENST00000556317 195 ntBASIC3.23□□□□□ -1.89
TMEM39AQ9NV64 AC096644.4-201ENST00000563417 2912 ntBASIC3.23□□□□□ -1.89
TMEM39AQ9NV64 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.23□□□□□ -1.89
TMEM39AQ9NV64 uc_338.4-201ENST00000616635 176 ntBASIC3.23□□□□□ -1.89
TMEM39AQ9NV64 U6.73-201ENST00000619194 103 ntBASIC3.23□□□□□ -1.89
TMEM39AQ9NV64 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
TMEM39AQ9NV64 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TMEM39AQ9NV64 AC138915.1-201ENST00000565427 1685 ntBASIC3.23□□□□□ -1.89
TMEM39AQ9NV64 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
TMEM39AQ9NV64 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
TMEM39AQ9NV64 AC073325.2-201ENST00000339545 159 ntBASIC3.22□□□□□ -1.89
TMEM39AQ9NV64 RNU6-978P-201ENST00000364371 103 ntBASIC3.22□□□□□ -1.89
TMEM39AQ9NV64 SNORA25.7-201ENST00000364375 127 ntBASIC3.22□□□□□ -1.89
TMEM39AQ9NV64 SNORD21-201ENST00000383953 95 ntBASIC3.22□□□□□ -1.89
TMEM39AQ9NV64 RNU2-48P-201ENST00000410694 191 ntBASIC3.22□□□□□ -1.89
TMEM39AQ9NV64 HMGN2P34-201ENST00000437647 269 ntBASIC3.22□□□□□ -1.89
TMEM39AQ9NV64 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.22□□□□□ -1.89
TMEM39AQ9NV64 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TMEM39AQ9NV64 MIR340-201ENST00000362125 95 ntBASIC3.21□□□□□ -1.9
TMEM39AQ9NV64 RNU6-1209P-201ENST00000363655 107 ntBASIC3.21□□□□□ -1.9
TMEM39AQ9NV64 RNU6-215P-201ENST00000365169 102 ntBASIC3.21□□□□□ -1.9
TMEM39AQ9NV64 RNU2-70P-201ENST00000410718 179 ntBASIC3.21□□□□□ -1.9
TMEM39AQ9NV64 AC060773.1-201ENST00000421698 310 ntBASIC3.21□□□□□ -1.9
TMEM39AQ9NV64 AC008413.1-201ENST00000511864 177 ntBASIC3.21□□□□□ -1.9
TMEM39AQ9NV64 SNORD77.4-201ENST00000516158 81 ntBASIC3.21□□□□□ -1.9
TMEM39AQ9NV64 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.21□□□□□ -1.9
TMEM39AQ9NV64 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.21□□□□□ -1.9
TMEM39AQ9NV64 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.21□□□□□ -1.9
TMEM39AQ9NV64 AC007318.2-201ENST00000620999 243 ntBASIC3.21□□□□□ -1.9
TMEM39AQ9NV64 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
TMEM39AQ9NV64 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.21□□□□□ -1.9
TMEM39AQ9NV64 Y_RNA.796-201ENST00000364268 102 ntBASIC3.2□□□□□ -1.9
TMEM39AQ9NV64 Y_RNA.799-201ENST00000364992 102 ntBASIC3.2□□□□□ -1.9
TMEM39AQ9NV64 SNORA9.2-201ENST00000365361 133 ntBASIC3.2□□□□□ -1.9
TMEM39AQ9NV64 SNORA70B-201ENST00000384210 135 ntBASIC3.2□□□□□ -1.9
TMEM39AQ9NV64 MIR561-201ENST00000385216 97 ntBASIC3.2□□□□□ -1.9
TMEM39AQ9NV64 AC244505.4-201ENST00000434905 287 ntBASIC3.2□□□□□ -1.9
TMEM39AQ9NV64 SSXP5-201ENST00000443473 287 ntBASIC3.2□□□□□ -1.9
TMEM39AQ9NV64 SNORD11-201ENST00000459124 84 ntBASIC3.2□□□□□ -1.9
TMEM39AQ9NV64 RNU6-659P-201ENST00000516454 104 ntBASIC3.2□□□□□ -1.9
TMEM39AQ9NV64 RNA5SP153-201ENST00000516498 76 ntBASIC3.2□□□□□ -1.9
TMEM39AQ9NV64 RNU6-1096P-201ENST00000517089 102 ntBASIC3.2□□□□□ -1.9
TMEM39AQ9NV64 AC068657.1-201ENST00000520807 306 ntBASIC3.2□□□□□ -1.9
TMEM39AQ9NV64 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
TMEM39AQ9NV64 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TMEM39AQ9NV64 RNU6-1186P-201ENST00000410429 97 ntBASIC3.19□□□□□ -1.9
TMEM39AQ9NV64 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.19□□□□□ -1.9
TMEM39AQ9NV64 RNU6-237P-201ENST00000515985 71 ntBASIC3.19□□□□□ -1.9
TMEM39AQ9NV64 RNU6-1146P-201ENST00000516282 102 ntBASIC3.19□□□□□ -1.9
TMEM39AQ9NV64 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.19□□□□□ -1.9
TMEM39AQ9NV64 AL590808.1-201ENST00000618696 141 ntBASIC3.19□□□□□ -1.9
TMEM39AQ9NV64 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.19□□□□□ -1.9
TMEM39AQ9NV64 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.19□□□□□ -1.9
TMEM39AQ9NV64 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.18□□□□□ -1.9
TMEM39AQ9NV64 Y_RNA.91-201ENST00000363042 107 ntBASIC3.18□□□□□ -1.9
TMEM39AQ9NV64 Y_RNA.634-201ENST00000364811 113 ntBASIC3.18□□□□□ -1.9
TMEM39AQ9NV64 RNU6-220P-201ENST00000390919 107 ntBASIC3.18□□□□□ -1.9
TMEM39AQ9NV64 MIR887-201ENST00000401258 79 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms