Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 AC090115.4-201ENST00000609970 188 ntBASIC2.8□□□□□ -1.96
GCM1Q9NP62 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
GCM1Q9NP62 AC092435.3-201ENST00000565538 3654 ntBASIC2.8□□□□□ -1.96
GCM1Q9NP62 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.8□□□□□ -1.96
GCM1Q9NP62 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
GCM1Q9NP62 SNORD46.1-201ENST00000364139 104 ntBASIC2.79□□□□□ -1.96
GCM1Q9NP62 RNU6-1131P-201ENST00000364955 107 ntBASIC2.79□□□□□ -1.96
GCM1Q9NP62 SNORD24-201ENST00000383884 75 ntBASIC2.79□□□□□ -1.96
GCM1Q9NP62 RNU6-1014P-201ENST00000383940 103 ntBASIC2.79□□□□□ -1.96
GCM1Q9NP62 SNORD61-201ENST00000384252 73 ntBASIC2.79□□□□□ -1.96
GCM1Q9NP62 Y_RNA.549-201ENST00000384657 102 ntBASIC2.79□□□□□ -1.96
GCM1Q9NP62 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.79□□□□□ -1.96
GCM1Q9NP62 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.79□□□□□ -1.96
GCM1Q9NP62 AC005326.1-201ENST00000429197 123 ntBASIC2.79□□□□□ -1.96
GCM1Q9NP62 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.79□□□□□ -1.96
GCM1Q9NP62 NDUFA4P2-201ENST00000489989 244 ntBASIC2.79□□□□□ -1.96
GCM1Q9NP62 MRPS17P9-201ENST00000511924 393 ntBASIC2.79□□□□□ -1.96
GCM1Q9NP62 RNA5SP281-201ENST00000516504 135 ntBASIC2.79□□□□□ -1.96
GCM1Q9NP62 RNU6-586P-201ENST00000517265 104 ntBASIC2.79□□□□□ -1.96
GCM1Q9NP62 SCARNA11.3-201ENST00000517276 130 ntBASIC2.79□□□□□ -1.96
GCM1Q9NP62 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.79□□□□□ -1.96
GCM1Q9NP62 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.79□□□□□ -1.96
GCM1Q9NP62 RNU6-94P-201ENST00000607728 107 ntBASIC2.79□□□□□ -1.96
GCM1Q9NP62 uc_338.1-201ENST00000612113 180 ntBASIC2.79□□□□□ -1.96
GCM1Q9NP62 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
GCM1Q9NP62 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
GCM1Q9NP62 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
GCM1Q9NP62 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
GCM1Q9NP62 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
GCM1Q9NP62 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
GCM1Q9NP62 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.78□□□□□ -1.96
GCM1Q9NP62 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
GCM1Q9NP62 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
GCM1Q9NP62 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
GCM1Q9NP62 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
GCM1Q9NP62 RNU6-888P-201ENST00000363010 101 ntBASIC2.78□□□□□ -1.96
GCM1Q9NP62 Y_RNA.366-201ENST00000365540 102 ntBASIC2.78□□□□□ -1.96
GCM1Q9NP62 RNA5SP120-201ENST00000410900 112 ntBASIC2.78□□□□□ -1.96
GCM1Q9NP62 AC010401.1-201ENST00000463867 348 ntBASIC2.78□□□□□ -1.96
GCM1Q9NP62 RPL39P34-201ENST00000477141 156 ntBASIC2.78□□□□□ -1.96
GCM1Q9NP62 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.78□□□□□ -1.96
GCM1Q9NP62 RNU6-1149P-201ENST00000516810 97 ntBASIC2.78□□□□□ -1.96
GCM1Q9NP62 RN7SKP282-201ENST00000516824 299 ntBASIC2.78□□□□□ -1.96
GCM1Q9NP62 MIR2276-201ENST00000516886 89 ntBASIC2.78□□□□□ -1.96
GCM1Q9NP62 RNU6-1096P-201ENST00000517089 102 ntBASIC2.78□□□□□ -1.96
GCM1Q9NP62 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.78□□□□□ -1.96
GCM1Q9NP62 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.78□□□□□ -1.96
GCM1Q9NP62 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.78□□□□□ -1.96
GCM1Q9NP62 AL589743.1-201ENST00000551932 2712 ntBASIC2.77□□□□□ -1.97
GCM1Q9NP62 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.77□□□□□ -1.97
GCM1Q9NP62 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
GCM1Q9NP62 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
GCM1Q9NP62 RNU1-70P-201ENST00000362618 164 ntBASIC2.77□□□□□ -1.97
GCM1Q9NP62 Y_RNA.323-201ENST00000365157 109 ntBASIC2.77□□□□□ -1.97
GCM1Q9NP62 Y_RNA.333-201ENST00000365274 102 ntBASIC2.77□□□□□ -1.97
GCM1Q9NP62 Y_RNA.388-201ENST00000383919 113 ntBASIC2.77□□□□□ -1.97
GCM1Q9NP62 Y_RNA.544-201ENST00000384650 113 ntBASIC2.77□□□□□ -1.97
GCM1Q9NP62 AL590004.2-201ENST00000404787 371 ntBASIC2.77□□□□□ -1.97
GCM1Q9NP62 MIR1253-201ENST00000408273 105 ntBASIC2.77□□□□□ -1.97
GCM1Q9NP62 Y_RNA.621-201ENST00000411065 96 ntBASIC2.77□□□□□ -1.97
GCM1Q9NP62 EDDM3CP-201ENST00000415977 425 ntBASIC2.77□□□□□ -1.97
GCM1Q9NP62 HMGN2P18-201ENST00000450680 270 ntBASIC2.77□□□□□ -1.97
GCM1Q9NP62 RN7SL442P-201ENST00000473804 320 ntBASIC2.77□□□□□ -1.97
GCM1Q9NP62 HMGN1P7-201ENST00000491722 313 ntBASIC2.77□□□□□ -1.97
GCM1Q9NP62 RNU6-970P-201ENST00000516312 107 ntBASIC2.77□□□□□ -1.97
GCM1Q9NP62 RNU6-1270P-201ENST00000517128 108 ntBASIC2.77□□□□□ -1.97
GCM1Q9NP62 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.77□□□□□ -1.97
GCM1Q9NP62 AC007179.3-201ENST00000604976 235 ntBASIC2.77□□□□□ -1.97
GCM1Q9NP62 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
GCM1Q9NP62 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
GCM1Q9NP62 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
GCM1Q9NP62 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.76□□□□□ -1.97
GCM1Q9NP62 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
GCM1Q9NP62 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
GCM1Q9NP62 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
GCM1Q9NP62 SNORA63.5-201ENST00000363548 123 ntBASIC2.76□□□□□ -1.97
GCM1Q9NP62 Y_RNA.242-201ENST00000364473 110 ntBASIC2.76□□□□□ -1.97
GCM1Q9NP62 RNU6-49P-201ENST00000384256 107 ntBASIC2.76□□□□□ -1.97
GCM1Q9NP62 SNORA51.10-201ENST00000384418 136 ntBASIC2.76□□□□□ -1.97
GCM1Q9NP62 AC025750.2-201ENST00000442609 450 ntBASIC2.76□□□□□ -1.97
GCM1Q9NP62 Z96811.1-201ENST00000445880 108 ntBASIC2.76□□□□□ -1.97
GCM1Q9NP62 HMGN1P18-201ENST00000457642 277 ntBASIC2.76□□□□□ -1.97
GCM1Q9NP62 RPS27P29-201ENST00000463110 252 ntBASIC2.76□□□□□ -1.97
GCM1Q9NP62 SCARNA15-202ENST00000516881 127 ntBASIC2.76□□□□□ -1.97
GCM1Q9NP62 RNA5SP490-201ENST00000517141 136 ntBASIC2.76□□□□□ -1.97
GCM1Q9NP62 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.76□□□□□ -1.97
GCM1Q9NP62 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.76□□□□□ -1.97
GCM1Q9NP62 AL035470.1-201ENST00000622571 220 ntBASIC2.76□□□□□ -1.97
GCM1Q9NP62 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
GCM1Q9NP62 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.75□□□□□ -1.97
GCM1Q9NP62 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
GCM1Q9NP62 SNORA68.1-201ENST00000364537 132 ntBASIC2.75□□□□□ -1.97
GCM1Q9NP62 RNU11-5P-201ENST00000391216 129 ntBASIC2.75□□□□□ -1.97
GCM1Q9NP62 SNORA11.1-201ENST00000408133 129 ntBASIC2.75□□□□□ -1.97
GCM1Q9NP62 SNRPGP10-201ENST00000432323 225 ntBASIC2.75□□□□□ -1.97
GCM1Q9NP62 CST9LP2-201ENST00000437612 320 ntBASIC2.75□□□□□ -1.97
GCM1Q9NP62 AP001486.1-201ENST00000463339 476 ntBASIC2.75□□□□□ -1.97
GCM1Q9NP62 AC011406.1-201ENST00000512440 370 ntBASIC2.75□□□□□ -1.97
GCM1Q9NP62 SNORA4.4-201ENST00000515921 135 ntBASIC2.75□□□□□ -1.97
GCM1Q9NP62 RNU6-693P-201ENST00000516134 107 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms