Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 AL929325.1-201ENST00000603096 117 ntBASIC3.4□□□□□ -1.87
ZFYVE28Q9HCC9 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
ZFYVE28Q9HCC9 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
ZFYVE28Q9HCC9 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
ZFYVE28Q9HCC9 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
ZFYVE28Q9HCC9 RNU1-23P-201ENST00000363361 144 ntBASIC3.39□□□□□ -1.87
ZFYVE28Q9HCC9 Y_RNA.273-201ENST00000364703 102 ntBASIC3.39□□□□□ -1.87
ZFYVE28Q9HCC9 Y_RNA.332-201ENST00000365271 113 ntBASIC3.39□□□□□ -1.87
ZFYVE28Q9HCC9 RNU6-80P-201ENST00000384195 107 ntBASIC3.39□□□□□ -1.87
ZFYVE28Q9HCC9 SNORA70B-201ENST00000384210 135 ntBASIC3.39□□□□□ -1.87
ZFYVE28Q9HCC9 UBL5P3-201ENST00000475112 231 ntBASIC3.39□□□□□ -1.87
ZFYVE28Q9HCC9 RNU4-57P-201ENST00000515980 135 ntBASIC3.39□□□□□ -1.87
ZFYVE28Q9HCC9 RNU6-991P-201ENST00000516168 107 ntBASIC3.39□□□□□ -1.87
ZFYVE28Q9HCC9 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.39□□□□□ -1.87
ZFYVE28Q9HCC9 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.39□□□□□ -1.87
ZFYVE28Q9HCC9 MIR3117-201ENST00000584034 78 ntBASIC3.39□□□□□ -1.87
ZFYVE28Q9HCC9 AL355297.2-201ENST00000604792 129 ntBASIC3.39□□□□□ -1.87
ZFYVE28Q9HCC9 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.39□□□□□ -1.87
ZFYVE28Q9HCC9 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
ZFYVE28Q9HCC9 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.39□□□□□ -1.87
ZFYVE28Q9HCC9 FAM35CP-201ENST00000554755 2470 ntBASIC3.38□□□□□ -1.87
ZFYVE28Q9HCC9 AC073325.2-201ENST00000339545 159 ntBASIC3.38□□□□□ -1.87
ZFYVE28Q9HCC9 MIR561-201ENST00000385216 97 ntBASIC3.38□□□□□ -1.87
ZFYVE28Q9HCC9 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.38□□□□□ -1.87
ZFYVE28Q9HCC9 RPS4XP11-201ENST00000446897 772 ntBASIC3.38□□□□□ -1.87
ZFYVE28Q9HCC9 RNU6-1146P-201ENST00000516282 102 ntBASIC3.38□□□□□ -1.87
ZFYVE28Q9HCC9 AL160236.1-201ENST00000556317 195 ntBASIC3.38□□□□□ -1.87
ZFYVE28Q9HCC9 RPL23AP91-201ENST00000569211 455 ntBASIC3.38□□□□□ -1.87
ZFYVE28Q9HCC9 AL590808.1-201ENST00000618696 141 ntBASIC3.38□□□□□ -1.87
ZFYVE28Q9HCC9 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.38□□□□□ -1.87
ZFYVE28Q9HCC9 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ZFYVE28Q9HCC9 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
ZFYVE28Q9HCC9 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.37□□□□□ -1.87
ZFYVE28Q9HCC9 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
ZFYVE28Q9HCC9 SNORA25.7-201ENST00000364375 127 ntBASIC3.37□□□□□ -1.87
ZFYVE28Q9HCC9 SNORA9.2-201ENST00000365361 133 ntBASIC3.37□□□□□ -1.87
ZFYVE28Q9HCC9 SNORD21-201ENST00000383953 95 ntBASIC3.37□□□□□ -1.87
ZFYVE28Q9HCC9 RNU6-856P-201ENST00000516959 98 ntBASIC3.37□□□□□ -1.87
ZFYVE28Q9HCC9 AC011604.1-201ENST00000545978 196 ntBASIC3.37□□□□□ -1.87
ZFYVE28Q9HCC9 AC120024.3-201ENST00000603167 156 ntBASIC3.37□□□□□ -1.87
ZFYVE28Q9HCC9 U7.2-201ENST00000607576 63 ntBASIC3.37□□□□□ -1.87
ZFYVE28Q9HCC9 U2.20-201ENST00000613956 192 ntBASIC3.37□□□□□ -1.87
ZFYVE28Q9HCC9 uc_338.4-201ENST00000616635 176 ntBASIC3.37□□□□□ -1.87
ZFYVE28Q9HCC9 U6.73-201ENST00000619194 103 ntBASIC3.37□□□□□ -1.87
ZFYVE28Q9HCC9 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
ZFYVE28Q9HCC9 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
ZFYVE28Q9HCC9 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ZFYVE28Q9HCC9 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.36□□□□□ -1.87
ZFYVE28Q9HCC9 Y_RNA.251-201ENST00000364551 99 ntBASIC3.36□□□□□ -1.87
ZFYVE28Q9HCC9 Y_RNA.353-201ENST00000365440 108 ntBASIC3.36□□□□□ -1.87
ZFYVE28Q9HCC9 RNU6-805P-201ENST00000365643 106 ntBASIC3.36□□□□□ -1.87
ZFYVE28Q9HCC9 DYNLT3P1-201ENST00000378574 347 ntBASIC3.36□□□□□ -1.87
ZFYVE28Q9HCC9 RNU6-484P-201ENST00000384016 107 ntBASIC3.36□□□□□ -1.87
ZFYVE28Q9HCC9 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
ZFYVE28Q9HCC9 AL513328.1-201ENST00000446460 224 ntBASIC3.36□□□□□ -1.87
ZFYVE28Q9HCC9 AC245102.2-201ENST00000448956 180 ntBASIC3.36□□□□□ -1.87
ZFYVE28Q9HCC9 RNU1-41P-201ENST00000516161 162 ntBASIC3.36□□□□□ -1.87
ZFYVE28Q9HCC9 RNU1-48P-201ENST00000516400 162 ntBASIC3.36□□□□□ -1.87
ZFYVE28Q9HCC9 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.36□□□□□ -1.87
ZFYVE28Q9HCC9 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.36□□□□□ -1.87
ZFYVE28Q9HCC9 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.35□□□□□ -1.87
ZFYVE28Q9HCC9 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
ZFYVE28Q9HCC9 RNU6-1082P-201ENST00000364574 107 ntBASIC3.35□□□□□ -1.87
ZFYVE28Q9HCC9 Y_RNA.584-201ENST00000391090 114 ntBASIC3.35□□□□□ -1.87
ZFYVE28Q9HCC9 MIR887-201ENST00000401258 79 ntBASIC3.35□□□□□ -1.87
ZFYVE28Q9HCC9 RNA5SP293-201ENST00000410527 113 ntBASIC3.35□□□□□ -1.87
ZFYVE28Q9HCC9 RPS27P29-201ENST00000463110 252 ntBASIC3.35□□□□□ -1.87
ZFYVE28Q9HCC9 AC008413.1-201ENST00000511864 177 ntBASIC3.35□□□□□ -1.87
ZFYVE28Q9HCC9 RNA5SP153-201ENST00000516498 76 ntBASIC3.35□□□□□ -1.87
ZFYVE28Q9HCC9 Y_RNA.686-201ENST00000516548 134 ntBASIC3.35□□□□□ -1.87
ZFYVE28Q9HCC9 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.35□□□□□ -1.87
ZFYVE28Q9HCC9 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.35□□□□□ -1.87
ZFYVE28Q9HCC9 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.35□□□□□ -1.87
ZFYVE28Q9HCC9 RNU6-859P-201ENST00000362728 107 ntBASIC3.34□□□□□ -1.87
ZFYVE28Q9HCC9 SNORD20-201ENST00000384550 80 ntBASIC3.34□□□□□ -1.87
ZFYVE28Q9HCC9 RNU11-5P-201ENST00000391216 129 ntBASIC3.34□□□□□ -1.87
ZFYVE28Q9HCC9 SNORA26-201ENST00000391286 122 ntBASIC3.34□□□□□ -1.87
ZFYVE28Q9HCC9 RNU2-70P-201ENST00000410718 179 ntBASIC3.34□□□□□ -1.87
ZFYVE28Q9HCC9 CYCSP49-201ENST00000420810 319 ntBASIC3.34□□□□□ -1.87
ZFYVE28Q9HCC9 HMGN2P34-201ENST00000437647 269 ntBASIC3.34□□□□□ -1.87
ZFYVE28Q9HCC9 AC007318.2-201ENST00000620999 243 ntBASIC3.34□□□□□ -1.87
ZFYVE28Q9HCC9 MIR7843-201ENST00000622274 79 ntBASIC3.34□□□□□ -1.87
ZFYVE28Q9HCC9 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.34□□□□□ -1.87
ZFYVE28Q9HCC9 RNU6-1209P-201ENST00000363655 107 ntBASIC3.33□□□□□ -1.88
ZFYVE28Q9HCC9 RNU6-915P-201ENST00000364943 103 ntBASIC3.33□□□□□ -1.88
ZFYVE28Q9HCC9 MIR520G-201ENST00000385064 90 ntBASIC3.33□□□□□ -1.88
ZFYVE28Q9HCC9 RNU2-48P-201ENST00000410694 191 ntBASIC3.33□□□□□ -1.88
ZFYVE28Q9HCC9 AC060773.1-201ENST00000421698 310 ntBASIC3.33□□□□□ -1.88
ZFYVE28Q9HCC9 AC092185.1-201ENST00000491371 97 ntBASIC3.33□□□□□ -1.88
ZFYVE28Q9HCC9 SNORD77.4-201ENST00000516158 81 ntBASIC3.33□□□□□ -1.88
ZFYVE28Q9HCC9 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.33□□□□□ -1.88
ZFYVE28Q9HCC9 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.33□□□□□ -1.88
ZFYVE28Q9HCC9 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
ZFYVE28Q9HCC9 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.33□□□□□ -1.88
ZFYVE28Q9HCC9 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ZFYVE28Q9HCC9 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ZFYVE28Q9HCC9 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ZFYVE28Q9HCC9 RNY1P11-201ENST00000363759 113 ntBASIC3.32□□□□□ -1.88
ZFYVE28Q9HCC9 Y_RNA.796-201ENST00000364268 102 ntBASIC3.32□□□□□ -1.88
ZFYVE28Q9HCC9 RNU6-978P-201ENST00000364371 103 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms