Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 MIR6844-201ENST00000637122 62 ntBASIC2.94□□□□□ -1.94
BCAS3Q9H6U6 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
BCAS3Q9H6U6 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
BCAS3Q9H6U6 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
BCAS3Q9H6U6 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.93□□□□□ -1.94
BCAS3Q9H6U6 RNA5SP289-201ENST00000362332 137 ntBASIC2.93□□□□□ -1.94
BCAS3Q9H6U6 SNORD20-201ENST00000384550 80 ntBASIC2.93□□□□□ -1.94
BCAS3Q9H6U6 U6atac.2-201ENST00000408644 118 ntBASIC2.93□□□□□ -1.94
BCAS3Q9H6U6 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.93□□□□□ -1.94
BCAS3Q9H6U6 AL513328.1-201ENST00000446460 224 ntBASIC2.93□□□□□ -1.94
BCAS3Q9H6U6 RNA5SP20-201ENST00000515976 84 ntBASIC2.93□□□□□ -1.94
BCAS3Q9H6U6 MIR449C-201ENST00000516047 92 ntBASIC2.93□□□□□ -1.94
BCAS3Q9H6U6 SCARNA17.1-201ENST00000516211 143 ntBASIC2.93□□□□□ -1.94
BCAS3Q9H6U6 RNA5SP320-201ENST00000516263 124 ntBASIC2.93□□□□□ -1.94
BCAS3Q9H6U6 SCARNA17.2-201ENST00000516334 143 ntBASIC2.93□□□□□ -1.94
BCAS3Q9H6U6 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
BCAS3Q9H6U6 AL359881.1-201ENST00000602916 267 ntBASIC2.93□□□□□ -1.94
BCAS3Q9H6U6 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
BCAS3Q9H6U6 SCARNA17.4-201ENST00000614296 143 ntBASIC2.93□□□□□ -1.94
BCAS3Q9H6U6 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
BCAS3Q9H6U6 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
BCAS3Q9H6U6 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
BCAS3Q9H6U6 ZNF702P-202ENST00000434269 1966 ntBASIC2.92□□□□□ -1.94
BCAS3Q9H6U6 SNORD37.2-201ENST00000391075 66 ntBASIC2.92□□□□□ -1.94
BCAS3Q9H6U6 AC008134.1-201ENST00000420943 193 ntBASIC2.92□□□□□ -1.94
BCAS3Q9H6U6 SNRPGP8-201ENST00000454064 226 ntBASIC2.92□□□□□ -1.94
BCAS3Q9H6U6 snoU13.26-201ENST00000459452 105 ntBASIC2.92□□□□□ -1.94
BCAS3Q9H6U6 RNU4-57P-201ENST00000515980 135 ntBASIC2.92□□□□□ -1.94
BCAS3Q9H6U6 RNU6-659P-201ENST00000516454 104 ntBASIC2.92□□□□□ -1.94
BCAS3Q9H6U6 SNORD59.2-201ENST00000516873 68 ntBASIC2.92□□□□□ -1.94
BCAS3Q9H6U6 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.92□□□□□ -1.94
BCAS3Q9H6U6 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.92□□□□□ -1.94
BCAS3Q9H6U6 MIR4769-201ENST00000584126 77 ntBASIC2.92□□□□□ -1.94
BCAS3Q9H6U6 U7.2-201ENST00000607576 63 ntBASIC2.92□□□□□ -1.94
BCAS3Q9H6U6 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.92□□□□□ -1.94
BCAS3Q9H6U6 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
BCAS3Q9H6U6 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.92□□□□□ -1.94
BCAS3Q9H6U6 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.92□□□□□ -1.94
BCAS3Q9H6U6 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.91□□□□□ -1.94
BCAS3Q9H6U6 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
BCAS3Q9H6U6 SNORD45.3-201ENST00000363836 72 ntBASIC2.91□□□□□ -1.94
BCAS3Q9H6U6 SNORA20-201ENST00000384662 132 ntBASIC2.91□□□□□ -1.94
BCAS3Q9H6U6 AL512604.1-201ENST00000404812 257 ntBASIC2.91□□□□□ -1.94
BCAS3Q9H6U6 RN7SL297P-201ENST00000483161 293 ntBASIC2.91□□□□□ -1.94
BCAS3Q9H6U6 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.91□□□□□ -1.94
BCAS3Q9H6U6 RNA5SP282-201ENST00000516355 108 ntBASIC2.91□□□□□ -1.94
BCAS3Q9H6U6 RNU6-586P-201ENST00000517265 104 ntBASIC2.91□□□□□ -1.94
BCAS3Q9H6U6 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.91□□□□□ -1.94
BCAS3Q9H6U6 MIR378D2-201ENST00000580636 98 ntBASIC2.91□□□□□ -1.94
BCAS3Q9H6U6 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.91□□□□□ -1.94
BCAS3Q9H6U6 AC090517.3-201ENST00000625170 141 ntBASIC2.91□□□□□ -1.94
BCAS3Q9H6U6 AC110079.1-202ENST00000635213 138 ntBASIC2.91□□□□□ -1.94
BCAS3Q9H6U6 MIR6733-201ENST00000635723 61 ntBASIC2.91□□□□□ -1.94
BCAS3Q9H6U6 MIR7157-201ENST00000635801 60 ntBASIC2.91□□□□□ -1.94
BCAS3Q9H6U6 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.91□□□□□ -1.94
BCAS3Q9H6U6 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
BCAS3Q9H6U6 AC092435.3-201ENST00000565538 3654 ntBASIC2.9□□□□□ -1.94
BCAS3Q9H6U6 AC103988.1-201ENST00000566382 2177 ntBASIC2.9□□□□□ -1.94
BCAS3Q9H6U6 AL356292.1-201ENST00000283110 373 ntBASIC2.9□□□□□ -1.95
BCAS3Q9H6U6 SNORA72-201ENST00000384339 132 ntBASIC2.9□□□□□ -1.95
BCAS3Q9H6U6 MIR95-201ENST00000385072 81 ntBASIC2.9□□□□□ -1.95
BCAS3Q9H6U6 RNA5SP210-201ENST00000391034 120 ntBASIC2.9□□□□□ -1.95
BCAS3Q9H6U6 RNU6-57P-201ENST00000411348 103 ntBASIC2.9□□□□□ -1.95
BCAS3Q9H6U6 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.9□□□□□ -1.95
BCAS3Q9H6U6 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.9□□□□□ -1.95
BCAS3Q9H6U6 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.9□□□□□ -1.95
BCAS3Q9H6U6 RNU6-1211P-201ENST00000459179 105 ntBASIC2.9□□□□□ -1.95
BCAS3Q9H6U6 RNU1-41P-201ENST00000516161 162 ntBASIC2.9□□□□□ -1.95
BCAS3Q9H6U6 SNORA9.3-201ENST00000516383 129 ntBASIC2.9□□□□□ -1.95
BCAS3Q9H6U6 RNU1-48P-201ENST00000516400 162 ntBASIC2.9□□□□□ -1.95
BCAS3Q9H6U6 RNU6-197P-201ENST00000516680 100 ntBASIC2.9□□□□□ -1.95
BCAS3Q9H6U6 RNU6-919P-201ENST00000516731 104 ntBASIC2.9□□□□□ -1.95
BCAS3Q9H6U6 RNU6-711P-201ENST00000517255 106 ntBASIC2.9□□□□□ -1.95
BCAS3Q9H6U6 AP001328.1-201ENST00000528550 176 ntBASIC2.9□□□□□ -1.95
BCAS3Q9H6U6 AC002064.3-201ENST00000623448 346 ntBASIC2.9□□□□□ -1.95
BCAS3Q9H6U6 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.9□□□□□ -1.95
BCAS3Q9H6U6 RNU6-978P-201ENST00000364371 103 ntBASIC2.89□□□□□ -1.95
BCAS3Q9H6U6 SNORD114-30-201ENST00000364448 72 ntBASIC2.89□□□□□ -1.95
BCAS3Q9H6U6 RNU6-484P-201ENST00000384016 107 ntBASIC2.89□□□□□ -1.95
BCAS3Q9H6U6 Y_RNA.521-201ENST00000384560 114 ntBASIC2.89□□□□□ -1.95
BCAS3Q9H6U6 AC016909.1-201ENST00000415916 166 ntBASIC2.89□□□□□ -1.95
BCAS3Q9H6U6 RPL30P4-201ENST00000429309 333 ntBASIC2.89□□□□□ -1.95
BCAS3Q9H6U6 AC245047.4-201ENST00000433189 144 ntBASIC2.89□□□□□ -1.95
BCAS3Q9H6U6 RPL23AP54-201ENST00000495129 419 ntBASIC2.89□□□□□ -1.95
BCAS3Q9H6U6 RNU6-1234P-201ENST00000516877 103 ntBASIC2.89□□□□□ -1.95
BCAS3Q9H6U6 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
BCAS3Q9H6U6 AC015720.1-201ENST00000565251 277 ntBASIC2.89□□□□□ -1.95
BCAS3Q9H6U6 AC097639.2-201ENST00000603159 172 ntBASIC2.89□□□□□ -1.95
BCAS3Q9H6U6 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.89□□□□□ -1.95
BCAS3Q9H6U6 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
BCAS3Q9H6U6 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
BCAS3Q9H6U6 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
BCAS3Q9H6U6 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
BCAS3Q9H6U6 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.88□□□□□ -1.95
BCAS3Q9H6U6 RNA5SP139-201ENST00000364340 117 ntBASIC2.88□□□□□ -1.95
BCAS3Q9H6U6 RNU6-1240P-201ENST00000365155 104 ntBASIC2.88□□□□□ -1.95
BCAS3Q9H6U6 SNORD14D-201ENST00000384390 87 ntBASIC2.88□□□□□ -1.95
BCAS3Q9H6U6 RNU6-460P-201ENST00000391158 108 ntBASIC2.88□□□□□ -1.95
BCAS3Q9H6U6 MIR887-201ENST00000401258 79 ntBASIC2.88□□□□□ -1.95
BCAS3Q9H6U6 AC008413.1-201ENST00000511864 177 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms