Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.38□□□□□ -2.19
UBQLN3Q9H347 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
UBQLN3Q9H347 RNU4-79P-201ENST00000362764 141 ntBASIC1.38□□□□□ -2.19
UBQLN3Q9H347 Y_RNA.101-201ENST00000363154 102 ntBASIC1.38□□□□□ -2.19
UBQLN3Q9H347 RNU1-42P-201ENST00000364033 160 ntBASIC1.38□□□□□ -2.19
UBQLN3Q9H347 Y_RNA.265-201ENST00000364677 108 ntBASIC1.38□□□□□ -2.19
UBQLN3Q9H347 Y_RNA.496-201ENST00000384444 101 ntBASIC1.38□□□□□ -2.19
UBQLN3Q9H347 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.38□□□□□ -2.19
UBQLN3Q9H347 AC023790.1-201ENST00000482174 347 ntBASIC1.38□□□□□ -2.19
UBQLN3Q9H347 RNU6-63P-201ENST00000516690 95 ntBASIC1.38□□□□□ -2.19
UBQLN3Q9H347 RNU2-56P-201ENST00000516826 190 ntBASIC1.38□□□□□ -2.19
UBQLN3Q9H347 RNU2-12P-201ENST00000517216 168 ntBASIC1.38□□□□□ -2.19
UBQLN3Q9H347 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.38□□□□□ -2.19
UBQLN3Q9H347 AC005828.6-201ENST00000606610 232 ntBASIC1.38□□□□□ -2.19
UBQLN3Q9H347 AP000648.3-201ENST00000623539 4507 ntBASIC1.38□□□□□ -2.19
UBQLN3Q9H347 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
UBQLN3Q9H347 RNU6-1123P-201ENST00000362347 106 ntBASIC1.37□□□□□ -2.19
UBQLN3Q9H347 RNU6-324P-201ENST00000363957 106 ntBASIC1.37□□□□□ -2.19
UBQLN3Q9H347 RNU4-13P-201ENST00000364019 141 ntBASIC1.37□□□□□ -2.19
UBQLN3Q9H347 RNU6-1065P-201ENST00000384513 106 ntBASIC1.37□□□□□ -2.19
UBQLN3Q9H347 SNORA67.6-201ENST00000391093 99 ntBASIC1.37□□□□□ -2.19
UBQLN3Q9H347 MIR1304-201ENST00000408243 91 ntBASIC1.37□□□□□ -2.19
UBQLN3Q9H347 BTF3P4-201ENST00000418852 495 ntBASIC1.37□□□□□ -2.19
UBQLN3Q9H347 AL135790.2-201ENST00000437701 267 ntBASIC1.37□□□□□ -2.19
UBQLN3Q9H347 AC027119.1-201ENST00000440877 241 ntBASIC1.37□□□□□ -2.19
UBQLN3Q9H347 AC233266.1-201ENST00000454518 96 ntBASIC1.37□□□□□ -2.19
UBQLN3Q9H347 RNU6-976P-201ENST00000516086 111 ntBASIC1.37□□□□□ -2.19
UBQLN3Q9H347 RNU6-1291P-201ENST00000516591 104 ntBASIC1.37□□□□□ -2.19
UBQLN3Q9H347 SNORA31.24-201ENST00000517232 57 ntBASIC1.37□□□□□ -2.19
UBQLN3Q9H347 RAB11AP2-201ENST00000545905 639 ntBASIC1.37□□□□□ -2.19
UBQLN3Q9H347 AL390123.1-201ENST00000603216 237 ntBASIC1.37□□□□□ -2.19
UBQLN3Q9H347 PRR13P7-201ENST00000605538 430 ntBASIC1.37□□□□□ -2.19
UBQLN3Q9H347 AC242852.1-201ENST00000612151 96 ntBASIC1.37□□□□□ -2.19
UBQLN3Q9H347 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.37□□□□□ -2.19
UBQLN3Q9H347 AC244015.1-201ENST00000622301 99 ntBASIC1.37□□□□□ -2.19
UBQLN3Q9H347 MIR378A-201ENST00000362177 66 ntBASIC1.36□□□□□ -2.19
UBQLN3Q9H347 Y_RNA.5-201ENST00000362334 102 ntBASIC1.36□□□□□ -2.19
UBQLN3Q9H347 SNORD115-30-201ENST00000364117 82 ntBASIC1.36□□□□□ -2.19
UBQLN3Q9H347 Y_RNA.252-201ENST00000364556 101 ntBASIC1.36□□□□□ -2.19
UBQLN3Q9H347 Y_RNA.315-201ENST00000365117 102 ntBASIC1.36□□□□□ -2.19
UBQLN3Q9H347 RNU2-54P-201ENST00000410299 190 ntBASIC1.36□□□□□ -2.19
UBQLN3Q9H347 AC022028.1-201ENST00000412054 408 ntBASIC1.36□□□□□ -2.19
UBQLN3Q9H347 AP1B1P2-201ENST00000416196 106 ntBASIC1.36□□□□□ -2.19
UBQLN3Q9H347 AL160004.2-201ENST00000432935 350 ntBASIC1.36□□□□□ -2.19
UBQLN3Q9H347 PGBD4P5-201ENST00000445958 426 ntBASIC1.36□□□□□ -2.19
UBQLN3Q9H347 RPS29P23-201ENST00000458635 123 ntBASIC1.36□□□□□ -2.19
UBQLN3Q9H347 RNU6-155P-201ENST00000516347 100 ntBASIC1.36□□□□□ -2.19
UBQLN3Q9H347 RPS29P30-201ENST00000600975 111 ntBASIC1.36□□□□□ -2.19
UBQLN3Q9H347 AL162424.1-201ENST00000602325 221 ntBASIC1.36□□□□□ -2.19
UBQLN3Q9H347 LARP7P1-201ENST00000605576 316 ntBASIC1.36□□□□□ -2.19
UBQLN3Q9H347 SNORA28-201ENST00000606769 126 ntBASIC1.36□□□□□ -2.19
UBQLN3Q9H347 AL365434.2-201ENST00000607979 234 ntBASIC1.36□□□□□ -2.19
UBQLN3Q9H347 AL512598.1-201ENST00000610158 273 ntBASIC1.36□□□□□ -2.19
UBQLN3Q9H347 SNORD3E-202ENST00000627253 216 ntBASIC1.36□□□□□ -2.19
UBQLN3Q9H347 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
UBQLN3Q9H347 Y_RNA.80-201ENST00000362996 102 ntBASIC1.35□□□□□ -2.19
UBQLN3Q9H347 Y_RNA.485-201ENST00000384395 102 ntBASIC1.35□□□□□ -2.19
UBQLN3Q9H347 RNU6-505P-201ENST00000384427 107 ntBASIC1.35□□□□□ -2.19
UBQLN3Q9H347 MIR562-201ENST00000384894 95 ntBASIC1.35□□□□□ -2.19
UBQLN3Q9H347 AL031003.1-201ENST00000404229 172 ntBASIC1.35□□□□□ -2.19
UBQLN3Q9H347 SNX2P2-201ENST00000424553 323 ntBASIC1.35□□□□□ -2.19
UBQLN3Q9H347 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.35□□□□□ -2.19
UBQLN3Q9H347 RNU7-95P-201ENST00000459222 64 ntBASIC1.35□□□□□ -2.19
UBQLN3Q9H347 RNU6-1170P-201ENST00000515974 106 ntBASIC1.35□□□□□ -2.19
UBQLN3Q9H347 SNORA70.12-201ENST00000516084 153 ntBASIC1.35□□□□□ -2.19
UBQLN3Q9H347 RNU4-77P-201ENST00000516692 156 ntBASIC1.35□□□□□ -2.19
UBQLN3Q9H347 RNU6-341P-201ENST00000516973 96 ntBASIC1.35□□□□□ -2.19
UBQLN3Q9H347 DNAJC19P9-201ENST00000555084 351 ntBASIC1.35□□□□□ -2.19
UBQLN3Q9H347 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.35□□□□□ -2.19
UBQLN3Q9H347 AC015720.1-201ENST00000565251 277 ntBASIC1.35□□□□□ -2.19
UBQLN3Q9H347 MIR5188-201ENST00000583467 113 ntBASIC1.35□□□□□ -2.19
UBQLN3Q9H347 AL133255.1-201ENST00000606374 441 ntBASIC1.35□□□□□ -2.19
UBQLN3Q9H347 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.35□□□□□ -2.19
UBQLN3Q9H347 AC006157.1-201ENST00000611750 366 ntBASIC1.35□□□□□ -2.19
UBQLN3Q9H347 AC073349.3-201ENST00000617616 186 ntBASIC1.35□□□□□ -2.19
UBQLN3Q9H347 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.35□□□□□ -2.19
UBQLN3Q9H347 AC091925.1-201ENST00000623204 462 ntBASIC1.35□□□□□ -2.19
UBQLN3Q9H347 AL008636.1-201ENST00000625038 1018 ntBASIC1.35□□□□□ -2.19
UBQLN3Q9H347 AL606534.2-204ENST00000635008 178 ntBASIC1.35□□□□□ -2.19
UBQLN3Q9H347 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
UBQLN3Q9H347 SNORA1B-201ENST00000362535 133 ntBASIC1.34□□□□□ -2.19
UBQLN3Q9H347 Y_RNA.197-201ENST00000364004 102 ntBASIC1.34□□□□□ -2.19
UBQLN3Q9H347 RNU6-117P-201ENST00000365415 107 ntBASIC1.34□□□□□ -2.19
UBQLN3Q9H347 Y_RNA.446-201ENST00000384178 104 ntBASIC1.34□□□□□ -2.19
UBQLN3Q9H347 SNORA12.1-201ENST00000390873 148 ntBASIC1.34□□□□□ -2.19
UBQLN3Q9H347 RN7SKP51-201ENST00000410781 304 ntBASIC1.34□□□□□ -2.19
UBQLN3Q9H347 RPS27P16-201ENST00000425758 201 ntBASIC1.34□□□□□ -2.19
UBQLN3Q9H347 SDAD1P3-201ENST00000427380 333 ntBASIC1.34□□□□□ -2.19
UBQLN3Q9H347 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.34□□□□□ -2.19
UBQLN3Q9H347 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.34□□□□□ -2.19
UBQLN3Q9H347 RNU6-1337P-201ENST00000516525 95 ntBASIC1.34□□□□□ -2.19
UBQLN3Q9H347 RNU6-1096P-201ENST00000517089 102 ntBASIC1.34□□□□□ -2.19
UBQLN3Q9H347 MIR4498-201ENST00000577599 66 ntBASIC1.34□□□□□ -2.19
UBQLN3Q9H347 AC091178.2-201ENST00000584401 117 ntBASIC1.34□□□□□ -2.19
UBQLN3Q9H347 snoU13.31-201ENST00000607291 104 ntBASIC1.34□□□□□ -2.19
UBQLN3Q9H347 AL138825.1-201ENST00000618587 192 ntBASIC1.34□□□□□ -2.19
UBQLN3Q9H347 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
UBQLN3Q9H347 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
UBQLN3Q9H347 SNORD114-7-201ENST00000362520 77 ntBASIC1.33□□□□□ -2.2
UBQLN3Q9H347 RNU1-115P-201ENST00000365329 160 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 169.3 ms