Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 UBL5P2-201ENST00000583788 219 ntBASIC2.61□□□□□ -1.99
SSBP3Q9BWW4 MIR3117-201ENST00000584034 78 ntBASIC2.61□□□□□ -1.99
SSBP3Q9BWW4 AC002064.3-201ENST00000623448 346 ntBASIC2.61□□□□□ -1.99
SSBP3Q9BWW4 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
SSBP3Q9BWW4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SSBP3Q9BWW4 MAPK10-322ENST00000641485 4530 ntBASIC2.61□□□□□ -1.99
SSBP3Q9BWW4 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SSBP3Q9BWW4 AL136360.1-201ENST00000503377 1900 ntBASIC2.6□□□□□ -1.99
SSBP3Q9BWW4 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
SSBP3Q9BWW4 Y_RNA.66-201ENST00000362862 102 ntBASIC2.6□□□□□ -1.99
SSBP3Q9BWW4 RNU6-1083P-201ENST00000384022 107 ntBASIC2.6□□□□□ -1.99
SSBP3Q9BWW4 MIR128-1-201ENST00000384921 82 ntBASIC2.6□□□□□ -1.99
SSBP3Q9BWW4 RNA5SP136-201ENST00000410906 107 ntBASIC2.6□□□□□ -1.99
SSBP3Q9BWW4 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.6□□□□□ -1.99
SSBP3Q9BWW4 AC009969.1-201ENST00000438726 172 ntBASIC2.6□□□□□ -1.99
SSBP3Q9BWW4 AC006483.1-201ENST00000487308 313 ntBASIC2.6□□□□□ -1.99
SSBP3Q9BWW4 RNU6-113P-201ENST00000516653 101 ntBASIC2.6□□□□□ -1.99
SSBP3Q9BWW4 AC007751.1-201ENST00000529260 376 ntBASIC2.6□□□□□ -1.99
SSBP3Q9BWW4 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
SSBP3Q9BWW4 AC007012.1-201ENST00000567192 175 ntBASIC2.6□□□□□ -1.99
SSBP3Q9BWW4 MIR3129-201ENST00000581095 76 ntBASIC2.6□□□□□ -1.99
SSBP3Q9BWW4 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
SSBP3Q9BWW4 AC073476.4-201ENST00000628409 72 ntBASIC2.6□□□□□ -1.99
SSBP3Q9BWW4 MIR622-201ENST00000638396 96 ntBASIC2.6□□□□□ -1.99
SSBP3Q9BWW4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SSBP3Q9BWW4 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.6□□□□□ -1.99
SSBP3Q9BWW4 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SSBP3Q9BWW4 FAM35CP-201ENST00000554755 2470 ntBASIC2.6□□□□□ -1.99
SSBP3Q9BWW4 AC009487.2-201ENST00000420969 6821 ntBASIC2.59□□□□□ -1.99
SSBP3Q9BWW4 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
SSBP3Q9BWW4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
SSBP3Q9BWW4 SNORA48.2-201ENST00000390926 124 ntBASIC2.59□□□□□ -1.99
SSBP3Q9BWW4 MIR1253-201ENST00000408273 105 ntBASIC2.59□□□□□ -1.99
SSBP3Q9BWW4 Y_RNA.621-201ENST00000411065 96 ntBASIC2.59□□□□□ -1.99
SSBP3Q9BWW4 AC007064.1-201ENST00000412238 351 ntBASIC2.59□□□□□ -1.99
SSBP3Q9BWW4 AC016909.1-201ENST00000415916 166 ntBASIC2.59□□□□□ -1.99
SSBP3Q9BWW4 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.59□□□□□ -1.99
SSBP3Q9BWW4 AC018634.1-201ENST00000437554 401 ntBASIC2.59□□□□□ -1.99
SSBP3Q9BWW4 SNORD59.2-201ENST00000516873 68 ntBASIC2.59□□□□□ -1.99
SSBP3Q9BWW4 AC245166.1-201ENST00000521012 253 ntBASIC2.59□□□□□ -1.99
SSBP3Q9BWW4 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.59□□□□□ -1.99
SSBP3Q9BWW4 U6.73-201ENST00000619194 103 ntBASIC2.59□□□□□ -1.99
SSBP3Q9BWW4 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SSBP3Q9BWW4 AP003122.5-201ENST00000527668 3766 ntBASIC2.59□□□□□ -2
SSBP3Q9BWW4 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SSBP3Q9BWW4 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
SSBP3Q9BWW4 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.58□□□□□ -2
SSBP3Q9BWW4 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.58□□□□□ -2
SSBP3Q9BWW4 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.58□□□□□ -2
SSBP3Q9BWW4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
SSBP3Q9BWW4 RNU6-1292P-201ENST00000383856 107 ntBASIC2.58□□□□□ -2
SSBP3Q9BWW4 MIR520G-201ENST00000385064 90 ntBASIC2.58□□□□□ -2
SSBP3Q9BWW4 RNU11-5P-201ENST00000391216 129 ntBASIC2.58□□□□□ -2
SSBP3Q9BWW4 MIR1302-5-201ENST00000408164 150 ntBASIC2.58□□□□□ -2
SSBP3Q9BWW4 RNU6-554P-201ENST00000410466 106 ntBASIC2.58□□□□□ -2
SSBP3Q9BWW4 RPL32P35-201ENST00000415214 394 ntBASIC2.58□□□□□ -2
SSBP3Q9BWW4 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.58□□□□□ -2
SSBP3Q9BWW4 AC096725.1-201ENST00000514266 313 ntBASIC2.58□□□□□ -2
SSBP3Q9BWW4 RNU6-711P-201ENST00000517255 106 ntBASIC2.58□□□□□ -2
SSBP3Q9BWW4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.58□□□□□ -2
SSBP3Q9BWW4 IGKV1-22-201ENST00000524313 326 ntBASIC2.58□□□□□ -2
SSBP3Q9BWW4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.58□□□□□ -2
SSBP3Q9BWW4 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.58□□□□□ -2
SSBP3Q9BWW4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.58□□□□□ -2
SSBP3Q9BWW4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.58□□□□□ -2
SSBP3Q9BWW4 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SSBP3Q9BWW4 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.57□□□□□ -2
SSBP3Q9BWW4 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.57□□□□□ -2
SSBP3Q9BWW4 RNU6-766P-201ENST00000362478 107 ntBASIC2.57□□□□□ -2
SSBP3Q9BWW4 Y_RNA.85-201ENST00000363014 111 ntBASIC2.57□□□□□ -2
SSBP3Q9BWW4 SNORA71.1-201ENST00000364523 117 ntBASIC2.57□□□□□ -2
SSBP3Q9BWW4 SNORA14A-201ENST00000364773 135 ntBASIC2.57□□□□□ -2
SSBP3Q9BWW4 RNU6-756P-201ENST00000383997 107 ntBASIC2.57□□□□□ -2
SSBP3Q9BWW4 SNORA1-201ENST00000384107 130 ntBASIC2.57□□□□□ -2
SSBP3Q9BWW4 MIR570-201ENST00000384917 97 ntBASIC2.57□□□□□ -2
SSBP3Q9BWW4 SNORD12C-201ENST00000386307 89 ntBASIC2.57□□□□□ -2
SSBP3Q9BWW4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.57□□□□□ -2
SSBP3Q9BWW4 AL031121.1-201ENST00000406553 254 ntBASIC2.57□□□□□ -2
SSBP3Q9BWW4 AL513477.1-202ENST00000417061 214 ntBASIC2.57□□□□□ -2
SSBP3Q9BWW4 HMGN2P18-201ENST00000450680 270 ntBASIC2.57□□□□□ -2
SSBP3Q9BWW4 SNORA4.4-201ENST00000515921 135 ntBASIC2.57□□□□□ -2
SSBP3Q9BWW4 RNA5SP217-201ENST00000515959 91 ntBASIC2.57□□□□□ -2
SSBP3Q9BWW4 RNU1-143P-201ENST00000516296 146 ntBASIC2.57□□□□□ -2
SSBP3Q9BWW4 RNU6-1096P-201ENST00000517089 102 ntBASIC2.57□□□□□ -2
SSBP3Q9BWW4 RNA5SP490-201ENST00000517141 136 ntBASIC2.57□□□□□ -2
SSBP3Q9BWW4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.57□□□□□ -2
SSBP3Q9BWW4 U1.23-201ENST00000610293 146 ntBASIC2.57□□□□□ -2
SSBP3Q9BWW4 RNU1-68P-201ENST00000615382 146 ntBASIC2.57□□□□□ -2
SSBP3Q9BWW4 U1.39-201ENST00000621562 146 ntBASIC2.57□□□□□ -2
SSBP3Q9BWW4 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.57□□□□□ -2
SSBP3Q9BWW4 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
SSBP3Q9BWW4 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.57□□□□□ -2
SSBP3Q9BWW4 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
SSBP3Q9BWW4 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.56□□□□□ -2
SSBP3Q9BWW4 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
SSBP3Q9BWW4 Y_RNA.242-201ENST00000364473 110 ntBASIC2.56□□□□□ -2
SSBP3Q9BWW4 SNORD67-201ENST00000390833 111 ntBASIC2.56□□□□□ -2
SSBP3Q9BWW4 SNORD72-201ENST00000390994 80 ntBASIC2.56□□□□□ -2
SSBP3Q9BWW4 NDUFB4P4-201ENST00000404822 243 ntBASIC2.56□□□□□ -2
SSBP3Q9BWW4 AC022018.1-201ENST00000430685 241 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms