Protein–RNA interactions for Protein: Q96PN7

TRERF1, Transcriptional-regulating factor 1, humanhuman

Predictions only

Length 1,200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1Q96PN7 RNU6-240P-201ENST00000516098 97 ntBASIC3.72□□□□□ -1.81
TRERF1Q96PN7 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.72□□□□□ -1.81
TRERF1Q96PN7 RNA5SP341-201ENST00000516261 117 ntBASIC3.72□□□□□ -1.81
TRERF1Q96PN7 RNU6-830P-201ENST00000516353 107 ntBASIC3.72□□□□□ -1.81
TRERF1Q96PN7 SCARNA13-201ENST00000516672 275 ntBASIC3.72□□□□□ -1.81
TRERF1Q96PN7 MIR2276-201ENST00000516886 89 ntBASIC3.72□□□□□ -1.81
TRERF1Q96PN7 RNU6-158P-201ENST00000517104 100 ntBASIC3.72□□□□□ -1.81
TRERF1Q96PN7 AC026421.1-201ENST00000519101 163 ntBASIC3.72□□□□□ -1.81
TRERF1Q96PN7 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.72□□□□□ -1.81
TRERF1Q96PN7 AL590808.1-201ENST00000618696 141 ntBASIC3.72□□□□□ -1.81
TRERF1Q96PN7 AC006111.3-201ENST00000622137 383 ntBASIC3.72□□□□□ -1.81
TRERF1Q96PN7 MIR376A2-201ENST00000636782 80 ntBASIC3.72□□□□□ -1.81
TRERF1Q96PN7 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.72□□□□□ -1.81
TRERF1Q96PN7 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.72□□□□□ -1.81
TRERF1Q96PN7 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRERF1Q96PN7 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.72□□□□□ -1.81
TRERF1Q96PN7 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.71□□□□□ -1.81
TRERF1Q96PN7 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TRERF1Q96PN7 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
TRERF1Q96PN7 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.71□□□□□ -1.82
TRERF1Q96PN7 SNORD56.3-201ENST00000363507 71 ntBASIC3.71□□□□□ -1.82
TRERF1Q96PN7 Y_RNA.198-201ENST00000364013 98 ntBASIC3.71□□□□□ -1.82
TRERF1Q96PN7 RNU6-1292P-201ENST00000383856 107 ntBASIC3.71□□□□□ -1.82
TRERF1Q96PN7 MIR300-201ENST00000401138 83 ntBASIC3.71□□□□□ -1.82
TRERF1Q96PN7 Y_RNA.593-201ENST00000410292 98 ntBASIC3.71□□□□□ -1.82
TRERF1Q96PN7 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.71□□□□□ -1.82
TRERF1Q96PN7 RPS27P22-201ENST00000478056 241 ntBASIC3.71□□□□□ -1.82
TRERF1Q96PN7 NDUFA4P2-201ENST00000489989 244 ntBASIC3.71□□□□□ -1.82
TRERF1Q96PN7 RNU6-904P-201ENST00000516206 101 ntBASIC3.71□□□□□ -1.82
TRERF1Q96PN7 RNU6-504P-201ENST00000516568 104 ntBASIC3.71□□□□□ -1.82
TRERF1Q96PN7 SNORA31.21-201ENST00000517180 77 ntBASIC3.71□□□□□ -1.82
TRERF1Q96PN7 RNA5SP380-201ENST00000517190 98 ntBASIC3.71□□□□□ -1.82
TRERF1Q96PN7 AC011604.1-201ENST00000545978 196 ntBASIC3.71□□□□□ -1.82
TRERF1Q96PN7 MIR2682-201ENST00000580305 110 ntBASIC3.71□□□□□ -1.82
TRERF1Q96PN7 U6.73-201ENST00000619194 103 ntBASIC3.71□□□□□ -1.82
TRERF1Q96PN7 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
TRERF1Q96PN7 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.7□□□□□ -1.82
TRERF1Q96PN7 MIR422A-201ENST00000362286 90 ntBASIC3.7□□□□□ -1.82
TRERF1Q96PN7 RNU6-414P-201ENST00000363705 104 ntBASIC3.7□□□□□ -1.82
TRERF1Q96PN7 AL031121.1-201ENST00000406553 254 ntBASIC3.7□□□□□ -1.82
TRERF1Q96PN7 AC063976.3-201ENST00000426849 329 ntBASIC3.7□□□□□ -1.82
TRERF1Q96PN7 AC009414.1-201ENST00000427200 443 ntBASIC3.7□□□□□ -1.82
TRERF1Q96PN7 RPL30P4-201ENST00000429309 333 ntBASIC3.7□□□□□ -1.82
TRERF1Q96PN7 AL445687.1-201ENST00000439946 251 ntBASIC3.7□□□□□ -1.82
TRERF1Q96PN7 HMGN1P18-201ENST00000457642 277 ntBASIC3.7□□□□□ -1.82
TRERF1Q96PN7 AC107297.1-201ENST00000459991 176 ntBASIC3.7□□□□□ -1.82
TRERF1Q96PN7 MRPS17P9-201ENST00000511924 393 ntBASIC3.7□□□□□ -1.82
TRERF1Q96PN7 RNU6-65P-201ENST00000516332 98 ntBASIC3.7□□□□□ -1.82
TRERF1Q96PN7 IGKV3-31-201ENST00000523109 329 ntBASIC3.7□□□□□ -1.82
TRERF1Q96PN7 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.7□□□□□ -1.82
TRERF1Q96PN7 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.7□□□□□ -1.82
TRERF1Q96PN7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.7□□□□□ -1.82
TRERF1Q96PN7 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRERF1Q96PN7 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.69□□□□□ -1.82
TRERF1Q96PN7 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TRERF1Q96PN7 RNU1-22P-201ENST00000363334 158 ntBASIC3.69□□□□□ -1.82
TRERF1Q96PN7 RNU6-1124P-201ENST00000384169 107 ntBASIC3.69□□□□□ -1.82
TRERF1Q96PN7 Y_RNA.466-201ENST00000384294 113 ntBASIC3.69□□□□□ -1.82
TRERF1Q96PN7 MIR634-201ENST00000385208 97 ntBASIC3.69□□□□□ -1.82
TRERF1Q96PN7 SNORD77.3-201ENST00000391113 65 ntBASIC3.69□□□□□ -1.82
TRERF1Q96PN7 Z98742.2-201ENST00000431564 187 ntBASIC3.69□□□□□ -1.82
TRERF1Q96PN7 RNY4P20-201ENST00000516678 93 ntBASIC3.69□□□□□ -1.82
TRERF1Q96PN7 AC104027.1-201ENST00000521887 300 ntBASIC3.69□□□□□ -1.82
TRERF1Q96PN7 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.68□□□□□ -1.82
TRERF1Q96PN7 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
TRERF1Q96PN7 RNY4P6-201ENST00000363667 96 ntBASIC3.68□□□□□ -1.82
TRERF1Q96PN7 Y_RNA.344-201ENST00000365381 112 ntBASIC3.68□□□□□ -1.82
TRERF1Q96PN7 RNA5SP229-201ENST00000410809 99 ntBASIC3.68□□□□□ -1.82
TRERF1Q96PN7 RNU6-126P-201ENST00000516685 103 ntBASIC3.68□□□□□ -1.82
TRERF1Q96PN7 AC079598.5-201ENST00000547460 117 ntBASIC3.68□□□□□ -1.82
TRERF1Q96PN7 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.68□□□□□ -1.82
TRERF1Q96PN7 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.68□□□□□ -1.82
TRERF1Q96PN7 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.68□□□□□ -1.82
TRERF1Q96PN7 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TRERF1Q96PN7 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TRERF1Q96PN7 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TRERF1Q96PN7 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TRERF1Q96PN7 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TRERF1Q96PN7 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TRERF1Q96PN7 Y_RNA.78-201ENST00000362970 110 ntBASIC3.67□□□□□ -1.82
TRERF1Q96PN7 RNU6-486P-201ENST00000363116 107 ntBASIC3.67□□□□□ -1.82
TRERF1Q96PN7 Y_RNA.107-201ENST00000363190 121 ntBASIC3.67□□□□□ -1.82
TRERF1Q96PN7 RNU6-418P-201ENST00000384035 107 ntBASIC3.67□□□□□ -1.82
TRERF1Q96PN7 RNU6-813P-201ENST00000384691 107 ntBASIC3.67□□□□□ -1.82
TRERF1Q96PN7 MIR548A2-201ENST00000384956 97 ntBASIC3.67□□□□□ -1.82
TRERF1Q96PN7 RNU6-1077P-201ENST00000410506 102 ntBASIC3.67□□□□□ -1.82
TRERF1Q96PN7 AP001486.1-201ENST00000463339 476 ntBASIC3.67□□□□□ -1.82
TRERF1Q96PN7 AL049873.1-201ENST00000480540 376 ntBASIC3.67□□□□□ -1.82
TRERF1Q96PN7 RPL36AP48-201ENST00000485521 314 ntBASIC3.67□□□□□ -1.82
TRERF1Q96PN7 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.67□□□□□ -1.82
TRERF1Q96PN7 SNORA31.1-201ENST00000515993 133 ntBASIC3.67□□□□□ -1.82
TRERF1Q96PN7 SNORA31.5-201ENST00000516190 133 ntBASIC3.67□□□□□ -1.82
TRERF1Q96PN7 RNA5SP395-201ENST00000516567 118 ntBASIC3.67□□□□□ -1.82
TRERF1Q96PN7 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.67□□□□□ -1.82
TRERF1Q96PN7 UBL5P2-201ENST00000583788 219 ntBASIC3.67□□□□□ -1.82
TRERF1Q96PN7 AC006435.5-201ENST00000624486 112 ntBASIC3.67□□□□□ -1.82
TRERF1Q96PN7 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.67□□□□□ -1.82
TRERF1Q96PN7 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.66□□□□□ -1.82
TRERF1Q96PN7 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRERF1Q96PN7 RNU6-888P-201ENST00000363010 101 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms