Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 MIR4753-201ENST00000585119 83 ntBASIC2.05□□□□□ -2.08
RTP4Q96DX8 U2.15-201ENST00000611544 191 ntBASIC2.05□□□□□ -2.08
RTP4Q96DX8 U2.16-201ENST00000613119 191 ntBASIC2.05□□□□□ -2.08
RTP4Q96DX8 U2.12-201ENST00000613778 191 ntBASIC2.05□□□□□ -2.08
RTP4Q96DX8 U2.20-201ENST00000613956 192 ntBASIC2.05□□□□□ -2.08
RTP4Q96DX8 AC004792.1-201ENST00000614523 137 ntBASIC2.05□□□□□ -2.08
RTP4Q96DX8 U2.9-201ENST00000615427 191 ntBASIC2.05□□□□□ -2.08
RTP4Q96DX8 U2.11-201ENST00000616345 191 ntBASIC2.05□□□□□ -2.08
RTP4Q96DX8 U2.2-201ENST00000616535 191 ntBASIC2.05□□□□□ -2.08
RTP4Q96DX8 U2.3-201ENST00000617785 191 ntBASIC2.05□□□□□ -2.08
RTP4Q96DX8 U2.19-201ENST00000618602 191 ntBASIC2.05□□□□□ -2.08
RTP4Q96DX8 RNU2-1-201ENST00000618664 191 ntBASIC2.05□□□□□ -2.08
RTP4Q96DX8 U2.6-201ENST00000619225 191 ntBASIC2.05□□□□□ -2.08
RTP4Q96DX8 U2.5-201ENST00000619465 191 ntBASIC2.05□□□□□ -2.08
RTP4Q96DX8 U2.10-201ENST00000620268 191 ntBASIC2.05□□□□□ -2.08
RTP4Q96DX8 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.05□□□□□ -2.08
RTP4Q96DX8 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.05□□□□□ -2.08
RTP4Q96DX8 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
RTP4Q96DX8 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
RTP4Q96DX8 RNU6-1272P-201ENST00000362776 107 ntBASIC2.04□□□□□ -2.08
RTP4Q96DX8 RNU6-211P-201ENST00000384047 107 ntBASIC2.04□□□□□ -2.08
RTP4Q96DX8 SNORA20B-201ENST00000384220 132 ntBASIC2.04□□□□□ -2.08
RTP4Q96DX8 Y_RNA.785-201ENST00000384290 109 ntBASIC2.04□□□□□ -2.08
RTP4Q96DX8 RNU6-763P-201ENST00000390865 106 ntBASIC2.04□□□□□ -2.08
RTP4Q96DX8 RNU6-482P-201ENST00000391068 107 ntBASIC2.04□□□□□ -2.08
RTP4Q96DX8 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.04□□□□□ -2.08
RTP4Q96DX8 Z82209.1-201ENST00000422141 2135 ntBASIC2.04□□□□□ -2.08
RTP4Q96DX8 PIGPP3-201ENST00000425307 415 ntBASIC2.04□□□□□ -2.08
RTP4Q96DX8 BTF3P11-201ENST00000426582 477 ntBASIC2.04□□□□□ -2.08
RTP4Q96DX8 AL445646.1-201ENST00000431784 216 ntBASIC2.04□□□□□ -2.08
RTP4Q96DX8 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.04□□□□□ -2.08
RTP4Q96DX8 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
RTP4Q96DX8 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.04□□□□□ -2.08
RTP4Q96DX8 AC107393.1-201ENST00000512403 346 ntBASIC2.04□□□□□ -2.08
RTP4Q96DX8 Y_RNA.700-201ENST00000516806 100 ntBASIC2.04□□□□□ -2.08
RTP4Q96DX8 IGLV3-17-201ENST00000519099 244 ntBASIC2.04□□□□□ -2.08
RTP4Q96DX8 CBX3P4-201ENST00000538909 354 ntBASIC2.04□□□□□ -2.08
RTP4Q96DX8 MIR3935-201ENST00000583472 104 ntBASIC2.04□□□□□ -2.08
RTP4Q96DX8 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.04□□□□□ -2.08
RTP4Q96DX8 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.04□□□□□ -2.08
RTP4Q96DX8 AC134026.1-201ENST00000623249 2239 ntBASIC2.04□□□□□ -2.08
RTP4Q96DX8 snoZ196.1-201ENST00000625269 89 ntBASIC2.04□□□□□ -2.08
RTP4Q96DX8 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.04□□□□□ -2.08
RTP4Q96DX8 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
RTP4Q96DX8 Y_RNA.150-201ENST00000363562 102 ntBASIC2.03□□□□□ -2.08
RTP4Q96DX8 AC024067.1-201ENST00000426199 223 ntBASIC2.03□□□□□ -2.08
RTP4Q96DX8 Y_RNA.644-201ENST00000459006 113 ntBASIC2.03□□□□□ -2.08
RTP4Q96DX8 SNORD65B-201ENST00000459126 73 ntBASIC2.03□□□□□ -2.08
RTP4Q96DX8 RNU6-221P-201ENST00000459541 99 ntBASIC2.03□□□□□ -2.08
RTP4Q96DX8 RPL23AP42-201ENST00000471152 471 ntBASIC2.03□□□□□ -2.08
RTP4Q96DX8 Y_RNA.674-201ENST00000516362 113 ntBASIC2.03□□□□□ -2.08
RTP4Q96DX8 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.03□□□□□ -2.08
RTP4Q96DX8 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
RTP4Q96DX8 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
RTP4Q96DX8 AL356292.1-201ENST00000283110 373 ntBASIC2.02□□□□□ -2.09
RTP4Q96DX8 RNU6-923P-201ENST00000364753 107 ntBASIC2.02□□□□□ -2.09
RTP4Q96DX8 RNU6-438P-201ENST00000365561 103 ntBASIC2.02□□□□□ -2.09
RTP4Q96DX8 RNU6-209P-201ENST00000384118 107 ntBASIC2.02□□□□□ -2.09
RTP4Q96DX8 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.02□□□□□ -2.09
RTP4Q96DX8 MTCO1P44-201ENST00000441935 243 ntBASIC2.02□□□□□ -2.09
RTP4Q96DX8 AC009238.1-201ENST00000442165 424 ntBASIC2.02□□□□□ -2.09
RTP4Q96DX8 AC009237.6-201ENST00000446969 424 ntBASIC2.02□□□□□ -2.09
RTP4Q96DX8 AC093259.1-201ENST00000509755 300 ntBASIC2.02□□□□□ -2.09
RTP4Q96DX8 RNU6-667P-201ENST00000517186 102 ntBASIC2.02□□□□□ -2.09
RTP4Q96DX8 AC025647.1-201ENST00000517879 253 ntBASIC2.02□□□□□ -2.09
RTP4Q96DX8 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.02□□□□□ -2.09
RTP4Q96DX8 CYCSP26-201ENST00000534107 320 ntBASIC2.02□□□□□ -2.09
RTP4Q96DX8 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.02□□□□□ -2.09
RTP4Q96DX8 Y_RNA.783-201ENST00000613546 102 ntBASIC2.02□□□□□ -2.09
RTP4Q96DX8 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
RTP4Q96DX8 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.02□□□□□ -2.09
RTP4Q96DX8 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
RTP4Q96DX8 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RTP4Q96DX8 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RTP4Q96DX8 Y_RNA.29-201ENST00000362570 113 ntBASIC2.01□□□□□ -2.09
RTP4Q96DX8 Y_RNA.308-201ENST00000365043 101 ntBASIC2.01□□□□□ -2.09
RTP4Q96DX8 Y_RNA.310-201ENST00000365063 113 ntBASIC2.01□□□□□ -2.09
RTP4Q96DX8 Y_RNA.332-201ENST00000365271 113 ntBASIC2.01□□□□□ -2.09
RTP4Q96DX8 SNORA25B-201ENST00000365507 128 ntBASIC2.01□□□□□ -2.09
RTP4Q96DX8 SNORD116-13-201ENST00000384408 92 ntBASIC2.01□□□□□ -2.09
RTP4Q96DX8 RNU1-148P-201ENST00000384472 162 ntBASIC2.01□□□□□ -2.09
RTP4Q96DX8 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.01□□□□□ -2.09
RTP4Q96DX8 HMGB3P3-201ENST00000510526 400 ntBASIC2.01□□□□□ -2.09
RTP4Q96DX8 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.01□□□□□ -2.09
RTP4Q96DX8 MIR4308-201ENST00000580634 81 ntBASIC2.01□□□□□ -2.09
RTP4Q96DX8 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.01□□□□□ -2.09
RTP4Q96DX8 AC098479.1-201ENST00000609225 154 ntBASIC2.01□□□□□ -2.09
RTP4Q96DX8 AC073349.3-201ENST00000617616 186 ntBASIC2.01□□□□□ -2.09
RTP4Q96DX8 FTX_2.1-201ENST00000618816 94 ntBASIC2.01□□□□□ -2.09
RTP4Q96DX8 AL365265.1-201ENST00000621045 234 ntBASIC2.01□□□□□ -2.09
RTP4Q96DX8 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.01□□□□□ -2.09
RTP4Q96DX8 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
RTP4Q96DX8 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
RTP4Q96DX8 RNU6-653P-201ENST00000363074 106 ntBASIC2□□□□□ -2.09
RTP4Q96DX8 RNA5SP99-201ENST00000364020 114 ntBASIC2□□□□□ -2.09
RTP4Q96DX8 RNU4-10P-201ENST00000364383 140 ntBASIC2□□□□□ -2.09
RTP4Q96DX8 RNU6-493P-201ENST00000391321 108 ntBASIC2□□□□□ -2.09
RTP4Q96DX8 PCNPP3-201ENST00000393579 471 ntBASIC2□□□□□ -2.09
RTP4Q96DX8 SUMO2P12-201ENST00000405924 140 ntBASIC2□□□□□ -2.09
RTP4Q96DX8 AL357139.1-201ENST00000407792 426 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 170.9 ms