Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.55□□□□□ -2
FOXRED1Q96CU9 AL929325.1-201ENST00000603096 117 ntBASIC2.55□□□□□ -2
FOXRED1Q96CU9 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.55□□□□□ -2
FOXRED1Q96CU9 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
FOXRED1Q96CU9 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.54□□□□□ -2
FOXRED1Q96CU9 RNA5SP493-201ENST00000364115 91 ntBASIC2.54□□□□□ -2
FOXRED1Q96CU9 Y_RNA.337-201ENST00000365312 102 ntBASIC2.54□□□□□ -2
FOXRED1Q96CU9 MIR613-201ENST00000385248 95 ntBASIC2.54□□□□□ -2
FOXRED1Q96CU9 Y_RNA.621-201ENST00000411065 96 ntBASIC2.54□□□□□ -2
FOXRED1Q96CU9 RPS29P6-201ENST00000438196 145 ntBASIC2.54□□□□□ -2
FOXRED1Q96CU9 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.54□□□□□ -2
FOXRED1Q96CU9 RNU7-94P-201ENST00000459576 63 ntBASIC2.54□□□□□ -2
FOXRED1Q96CU9 SNORA9.3-201ENST00000516383 129 ntBASIC2.54□□□□□ -2
FOXRED1Q96CU9 RPPH1-2P-201ENST00000516688 293 ntBASIC2.54□□□□□ -2
FOXRED1Q96CU9 RN7SKP57-201ENST00000517248 293 ntBASIC2.54□□□□□ -2
FOXRED1Q96CU9 AC024995.1-201ENST00000523014 93 ntBASIC2.54□□□□□ -2
FOXRED1Q96CU9 MIR8057-201ENST00000620957 69 ntBASIC2.54□□□□□ -2
FOXRED1Q96CU9 AC100821.1-201ENST00000523153 2479 ntBASIC2.54□□□□□ -2
FOXRED1Q96CU9 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
FOXRED1Q96CU9 SNORA9.2-201ENST00000365361 133 ntBASIC2.53□□□□□ -2
FOXRED1Q96CU9 RNU6-1130P-201ENST00000365434 107 ntBASIC2.53□□□□□ -2
FOXRED1Q96CU9 MIR512-1-201ENST00000384913 84 ntBASIC2.53□□□□□ -2
FOXRED1Q96CU9 Y_RNA.587-201ENST00000391210 103 ntBASIC2.53□□□□□ -2
FOXRED1Q96CU9 AL590004.2-201ENST00000404787 371 ntBASIC2.53□□□□□ -2
FOXRED1Q96CU9 SNORA11.4-201ENST00000408823 129 ntBASIC2.53□□□□□ -2
FOXRED1Q96CU9 AC006461.1-201ENST00000412637 326 ntBASIC2.53□□□□□ -2
FOXRED1Q96CU9 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.53□□□□□ -2
FOXRED1Q96CU9 TMSB4XP3-201ENST00000445144 114 ntBASIC2.53□□□□□ -2
FOXRED1Q96CU9 RNU6-346P-201ENST00000516288 111 ntBASIC2.53□□□□□ -2
FOXRED1Q96CU9 RNU6-826P-201ENST00000516827 104 ntBASIC2.53□□□□□ -2
FOXRED1Q96CU9 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.53□□□□□ -2
FOXRED1Q96CU9 MIR4325-201ENST00000583049 90 ntBASIC2.53□□□□□ -2
FOXRED1Q96CU9 AL161756.2-201ENST00000604597 246 ntBASIC2.53□□□□□ -2
FOXRED1Q96CU9 JPX_2.1-201ENST00000614161 69 ntBASIC2.53□□□□□ -2
FOXRED1Q96CU9 MIR6079-201ENST00000635807 62 ntBASIC2.53□□□□□ -2
FOXRED1Q96CU9 AC018630.2-201ENST00000534866 2403 ntBASIC2.53□□□□□ -2
FOXRED1Q96CU9 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
FOXRED1Q96CU9 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
FOXRED1Q96CU9 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.52□□□□□ -2.01
FOXRED1Q96CU9 SNORD115-3-201ENST00000363100 82 ntBASIC2.52□□□□□ -2.01
FOXRED1Q96CU9 Y_RNA.343-201ENST00000365354 112 ntBASIC2.52□□□□□ -2.01
FOXRED1Q96CU9 SNORD50.2-201ENST00000365465 70 ntBASIC2.52□□□□□ -2.01
FOXRED1Q96CU9 Y_RNA.400-201ENST00000383963 111 ntBASIC2.52□□□□□ -2.01
FOXRED1Q96CU9 RNU6-1080P-201ENST00000383982 107 ntBASIC2.52□□□□□ -2.01
FOXRED1Q96CU9 RNU6-643P-201ENST00000384018 107 ntBASIC2.52□□□□□ -2.01
FOXRED1Q96CU9 SNORA8-201ENST00000384574 139 ntBASIC2.52□□□□□ -2.01
FOXRED1Q96CU9 RNU2-55P-201ENST00000411146 174 ntBASIC2.52□□□□□ -2.01
FOXRED1Q96CU9 AC233266.1-201ENST00000454518 96 ntBASIC2.52□□□□□ -2.01
FOXRED1Q96CU9 RNU7-121P-201ENST00000516604 62 ntBASIC2.52□□□□□ -2.01
FOXRED1Q96CU9 RPL23AP91-201ENST00000569211 455 ntBASIC2.52□□□□□ -2.01
FOXRED1Q96CU9 MIR3910-1-201ENST00000580936 111 ntBASIC2.52□□□□□ -2.01
FOXRED1Q96CU9 RPL12P50-201ENST00000603116 116 ntBASIC2.52□□□□□ -2.01
FOXRED1Q96CU9 AP001485.1-201ENST00000604799 199 ntBASIC2.52□□□□□ -2.01
FOXRED1Q96CU9 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.52□□□□□ -2.01
FOXRED1Q96CU9 AC242852.1-201ENST00000612151 96 ntBASIC2.52□□□□□ -2.01
FOXRED1Q96CU9 Y_RNA.778-201ENST00000620203 90 ntBASIC2.52□□□□□ -2.01
FOXRED1Q96CU9 AC244015.1-201ENST00000622301 99 ntBASIC2.52□□□□□ -2.01
FOXRED1Q96CU9 AC091953.5-201ENST00000622919 233 ntBASIC2.52□□□□□ -2.01
FOXRED1Q96CU9 FO624990.1-201ENST00000636373 85 ntBASIC2.52□□□□□ -2.01
FOXRED1Q96CU9 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
FOXRED1Q96CU9 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
FOXRED1Q96CU9 MIR422A-201ENST00000362286 90 ntBASIC2.51□□□□□ -2.01
FOXRED1Q96CU9 RNA5SP374-201ENST00000362939 125 ntBASIC2.51□□□□□ -2.01
FOXRED1Q96CU9 RNU6-1164P-201ENST00000364428 107 ntBASIC2.51□□□□□ -2.01
FOXRED1Q96CU9 SNORA9-201ENST00000384215 133 ntBASIC2.51□□□□□ -2.01
FOXRED1Q96CU9 AL117342.1-201ENST00000404861 406 ntBASIC2.51□□□□□ -2.01
FOXRED1Q96CU9 RNU4-43P-201ENST00000410628 137 ntBASIC2.51□□□□□ -2.01
FOXRED1Q96CU9 AL049873.1-201ENST00000480540 376 ntBASIC2.51□□□□□ -2.01
FOXRED1Q96CU9 SNORA74D-201ENST00000516404 141 ntBASIC2.51□□□□□ -2.01
FOXRED1Q96CU9 RNU6-341P-201ENST00000516973 96 ntBASIC2.51□□□□□ -2.01
FOXRED1Q96CU9 RNU7-128P-201ENST00000517247 62 ntBASIC2.51□□□□□ -2.01
FOXRED1Q96CU9 MIR3605-201ENST00000583214 100 ntBASIC2.51□□□□□ -2.01
FOXRED1Q96CU9 DNAJC19P2-201ENST00000593340 302 ntBASIC2.51□□□□□ -2.01
FOXRED1Q96CU9 AL049861.1-201ENST00000603130 150 ntBASIC2.51□□□□□ -2.01
FOXRED1Q96CU9 AL162274.2-201ENST00000614406 332 ntBASIC2.51□□□□□ -2.01
FOXRED1Q96CU9 U2.22-201ENST00000636441 106 ntBASIC2.51□□□□□ -2.01
FOXRED1Q96CU9 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.51□□□□□ -2.01
FOXRED1Q96CU9 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
FOXRED1Q96CU9 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
FOXRED1Q96CU9 ZNF271P-202ENST00000465539 1970 ntBASIC2.5□□□□□ -2.01
FOXRED1Q96CU9 RNU6-151P-201ENST00000364158 107 ntBASIC2.5□□□□□ -2.01
FOXRED1Q96CU9 Y_RNA.488-201ENST00000384403 102 ntBASIC2.5□□□□□ -2.01
FOXRED1Q96CU9 RNU1-148P-201ENST00000384472 162 ntBASIC2.5□□□□□ -2.01
FOXRED1Q96CU9 RNU6-851P-201ENST00000384565 107 ntBASIC2.5□□□□□ -2.01
FOXRED1Q96CU9 MIR1278-201ENST00000408753 81 ntBASIC2.5□□□□□ -2.01
FOXRED1Q96CU9 Y_RNA.622-201ENST00000411091 108 ntBASIC2.5□□□□□ -2.01
FOXRED1Q96CU9 RNA5SP137-201ENST00000516833 135 ntBASIC2.5□□□□□ -2.01
FOXRED1Q96CU9 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.5□□□□□ -2.01
FOXRED1Q96CU9 AL358944.1-201ENST00000528537 144 ntBASIC2.5□□□□□ -2.01
FOXRED1Q96CU9 MIR3169-201ENST00000578032 83 ntBASIC2.5□□□□□ -2.01
FOXRED1Q96CU9 MIR4446-201ENST00000578505 67 ntBASIC2.5□□□□□ -2.01
FOXRED1Q96CU9 AC091178.2-201ENST00000584401 117 ntBASIC2.5□□□□□ -2.01
FOXRED1Q96CU9 AL031274.2-201ENST00000599419 203 ntBASIC2.5□□□□□ -2.01
FOXRED1Q96CU9 AL021707.8-201ENST00000609428 183 ntBASIC2.5□□□□□ -2.01
FOXRED1Q96CU9 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.5□□□□□ -2.01
FOXRED1Q96CU9 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
FOXRED1Q96CU9 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
FOXRED1Q96CU9 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.49□□□□□ -2.01
FOXRED1Q96CU9 MIR26A1-201ENST00000362205 77 ntBASIC2.49□□□□□ -2.01
FOXRED1Q96CU9 RNU1-58P-201ENST00000362413 163 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 352.2 ms