Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 AC019288.1-201ENST00000557918 224 ntBASIC3.68□□□□□ -1.82
NEDD1Q8NHV4 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.68□□□□□ -1.82
NEDD1Q8NHV4 U7.3-201ENST00000616123 62 ntBASIC3.68□□□□□ -1.82
NEDD1Q8NHV4 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.68□□□□□ -1.82
NEDD1Q8NHV4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.68□□□□□ -1.82
NEDD1Q8NHV4 AL162726.3-218ENST00000636401 95 ntBASIC3.68□□□□□ -1.82
NEDD1Q8NHV4 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
NEDD1Q8NHV4 AC093010.3-201ENST00000570269 15214 ntBASIC3.68□□□□□ -1.82
NEDD1Q8NHV4 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
NEDD1Q8NHV4 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
NEDD1Q8NHV4 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
NEDD1Q8NHV4 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NEDD1Q8NHV4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
NEDD1Q8NHV4 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NEDD1Q8NHV4 MIR422A-201ENST00000362286 90 ntBASIC3.67□□□□□ -1.82
NEDD1Q8NHV4 RNU6-776P-201ENST00000364403 104 ntBASIC3.67□□□□□ -1.82
NEDD1Q8NHV4 RNU6-1022P-201ENST00000365049 104 ntBASIC3.67□□□□□ -1.82
NEDD1Q8NHV4 SNORA54-201ENST00000384281 123 ntBASIC3.67□□□□□ -1.82
NEDD1Q8NHV4 SNORA1.3-201ENST00000384676 136 ntBASIC3.67□□□□□ -1.82
NEDD1Q8NHV4 SNORA11.2-201ENST00000408318 127 ntBASIC3.67□□□□□ -1.82
NEDD1Q8NHV4 Z92545.1-201ENST00000411782 234 ntBASIC3.67□□□□□ -1.82
NEDD1Q8NHV4 RNU7-171P-201ENST00000459581 62 ntBASIC3.67□□□□□ -1.82
NEDD1Q8NHV4 AC097462.1-201ENST00000514125 324 ntBASIC3.67□□□□□ -1.82
NEDD1Q8NHV4 RNU6-1018P-201ENST00000516577 106 ntBASIC3.67□□□□□ -1.82
NEDD1Q8NHV4 RNU6-267P-201ENST00000516714 103 ntBASIC3.67□□□□□ -1.82
NEDD1Q8NHV4 RNU6-1098P-201ENST00000516772 96 ntBASIC3.67□□□□□ -1.82
NEDD1Q8NHV4 AC091152.3-201ENST00000604227 325 ntBASIC3.67□□□□□ -1.82
NEDD1Q8NHV4 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.67□□□□□ -1.82
NEDD1Q8NHV4 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.67□□□□□ -1.82
NEDD1Q8NHV4 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NEDD1Q8NHV4 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.67□□□□□ -1.82
NEDD1Q8NHV4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NEDD1Q8NHV4 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
NEDD1Q8NHV4 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
NEDD1Q8NHV4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NEDD1Q8NHV4 AL021368.2-201ENST00000606125 5352 ntBASIC3.66□□□□□ -1.82
NEDD1Q8NHV4 RNU6-888P-201ENST00000363010 101 ntBASIC3.66□□□□□ -1.82
NEDD1Q8NHV4 RNU6-1099P-201ENST00000363533 107 ntBASIC3.66□□□□□ -1.82
NEDD1Q8NHV4 SNORD15B-201ENST00000384714 146 ntBASIC3.66□□□□□ -1.82
NEDD1Q8NHV4 RNU6-644P-201ENST00000391155 98 ntBASIC3.66□□□□□ -1.82
NEDD1Q8NHV4 AL451046.2-201ENST00000403074 277 ntBASIC3.66□□□□□ -1.82
NEDD1Q8NHV4 AL031121.1-201ENST00000406553 254 ntBASIC3.66□□□□□ -1.82
NEDD1Q8NHV4 RN7SKP220-201ENST00000410611 288 ntBASIC3.66□□□□□ -1.82
NEDD1Q8NHV4 RNU6-221P-201ENST00000459541 99 ntBASIC3.66□□□□□ -1.82
NEDD1Q8NHV4 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.66□□□□□ -1.82
NEDD1Q8NHV4 AL162274.2-201ENST00000614406 332 ntBASIC3.66□□□□□ -1.82
NEDD1Q8NHV4 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.66□□□□□ -1.82
NEDD1Q8NHV4 MIR7153-201ENST00000637758 57 ntBASIC3.66□□□□□ -1.82
NEDD1Q8NHV4 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.66□□□□□ -1.82
NEDD1Q8NHV4 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
NEDD1Q8NHV4 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
NEDD1Q8NHV4 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NEDD1Q8NHV4 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.66□□□□□ -1.82
NEDD1Q8NHV4 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.65□□□□□ -1.82
NEDD1Q8NHV4 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
NEDD1Q8NHV4 snoU2_19.1-201ENST00000362361 80 ntBASIC3.65□□□□□ -1.83
NEDD1Q8NHV4 RNU6-349P-201ENST00000362402 107 ntBASIC3.65□□□□□ -1.83
NEDD1Q8NHV4 Y_RNA.437-201ENST00000384113 113 ntBASIC3.65□□□□□ -1.83
NEDD1Q8NHV4 RNU6-402P-201ENST00000410678 103 ntBASIC3.65□□□□□ -1.83
NEDD1Q8NHV4 ARF4P2-201ENST00000430209 526 ntBASIC3.65□□□□□ -1.83
NEDD1Q8NHV4 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.65□□□□□ -1.83
NEDD1Q8NHV4 MRPS17P9-201ENST00000511924 393 ntBASIC3.65□□□□□ -1.83
NEDD1Q8NHV4 AC022523.2-201ENST00000561045 150 ntBASIC3.65□□□□□ -1.83
NEDD1Q8NHV4 MIR3186-201ENST00000577404 85 ntBASIC3.65□□□□□ -1.83
NEDD1Q8NHV4 MIR4474-201ENST00000579189 78 ntBASIC3.65□□□□□ -1.83
NEDD1Q8NHV4 MIR3117-201ENST00000584034 78 ntBASIC3.65□□□□□ -1.83
NEDD1Q8NHV4 AC012531.4-201ENST00000616509 177 ntBASIC3.65□□□□□ -1.83
NEDD1Q8NHV4 AC010680.1-201ENST00000590024 3590 ntBASIC3.65□□□□□ -1.83
NEDD1Q8NHV4 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
NEDD1Q8NHV4 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.65□□□□□ -1.83
NEDD1Q8NHV4 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
NEDD1Q8NHV4 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
NEDD1Q8NHV4 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.64□□□□□ -1.83
NEDD1Q8NHV4 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
NEDD1Q8NHV4 RNU1-133P-201ENST00000364867 167 ntBASIC3.64□□□□□ -1.83
NEDD1Q8NHV4 Y_RNA.601-201ENST00000410500 113 ntBASIC3.64□□□□□ -1.83
NEDD1Q8NHV4 AC023141.4-201ENST00000412031 328 ntBASIC3.64□□□□□ -1.83
NEDD1Q8NHV4 RPL39P25-201ENST00000449384 154 ntBASIC3.64□□□□□ -1.83
NEDD1Q8NHV4 RNU1-143P-201ENST00000516296 146 ntBASIC3.64□□□□□ -1.83
NEDD1Q8NHV4 AC104027.1-201ENST00000521887 300 ntBASIC3.64□□□□□ -1.83
NEDD1Q8NHV4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.64□□□□□ -1.83
NEDD1Q8NHV4 MIR548Z-201ENST00000584743 97 ntBASIC3.64□□□□□ -1.83
NEDD1Q8NHV4 HMGN2P15-201ENST00000585707 270 ntBASIC3.64□□□□□ -1.83
NEDD1Q8NHV4 U1.23-201ENST00000610293 146 ntBASIC3.64□□□□□ -1.83
NEDD1Q8NHV4 RNU1-68P-201ENST00000615382 146 ntBASIC3.64□□□□□ -1.83
NEDD1Q8NHV4 U6.73-201ENST00000619194 103 ntBASIC3.64□□□□□ -1.83
NEDD1Q8NHV4 U1.39-201ENST00000621562 146 ntBASIC3.64□□□□□ -1.83
NEDD1Q8NHV4 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
NEDD1Q8NHV4 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NEDD1Q8NHV4 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.63□□□□□ -1.83
NEDD1Q8NHV4 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NEDD1Q8NHV4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NEDD1Q8NHV4 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NEDD1Q8NHV4 SNORA33-201ENST00000363664 130 ntBASIC3.63□□□□□ -1.83
NEDD1Q8NHV4 RNU4-36P-201ENST00000364294 144 ntBASIC3.63□□□□□ -1.83
NEDD1Q8NHV4 SNORD32B-201ENST00000364460 84 ntBASIC3.63□□□□□ -1.83
NEDD1Q8NHV4 Y_RNA.298-201ENST00000364960 107 ntBASIC3.63□□□□□ -1.83
NEDD1Q8NHV4 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
NEDD1Q8NHV4 MIR1283-1-201ENST00000408494 87 ntBASIC3.63□□□□□ -1.83
NEDD1Q8NHV4 RNU6-795P-201ENST00000516323 103 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 204 ms