Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 RNU6-781P-201ENST00000516377 101 ntBASIC3.4□□□□□ -1.87
DEPDC4Q8N2C3 RNU7-28P-201ENST00000516759 62 ntBASIC3.4□□□□□ -1.87
DEPDC4Q8N2C3 AC068657.1-201ENST00000520807 306 ntBASIC3.4□□□□□ -1.87
DEPDC4Q8N2C3 AC008011.1-201ENST00000545989 227 ntBASIC3.4□□□□□ -1.87
DEPDC4Q8N2C3 AC026271.5-201ENST00000577873 130 ntBASIC3.4□□□□□ -1.87
DEPDC4Q8N2C3 MIR3169-201ENST00000578032 83 ntBASIC3.4□□□□□ -1.87
DEPDC4Q8N2C3 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.4□□□□□ -1.87
DEPDC4Q8N2C3 AC025166.1-201ENST00000612411 163 ntBASIC3.4□□□□□ -1.87
DEPDC4Q8N2C3 AC006441.5-201ENST00000612680 209 ntBASIC3.4□□□□□ -1.87
DEPDC4Q8N2C3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.4□□□□□ -1.87
DEPDC4Q8N2C3 CTSLP2-204ENST00000629029 392 ntBASIC3.4□□□□□ -1.87
DEPDC4Q8N2C3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.4□□□□□ -1.87
DEPDC4Q8N2C3 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.4□□□□□ -1.87
DEPDC4Q8N2C3 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.4□□□□□ -1.87
DEPDC4Q8N2C3 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.4□□□□□ -1.87
DEPDC4Q8N2C3 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.4□□□□□ -1.87
DEPDC4Q8N2C3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
DEPDC4Q8N2C3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.39□□□□□ -1.87
DEPDC4Q8N2C3 MIR30B-201ENST00000384850 88 ntBASIC3.39□□□□□ -1.87
DEPDC4Q8N2C3 MIR518F-201ENST00000384973 87 ntBASIC3.39□□□□□ -1.87
DEPDC4Q8N2C3 MIR802-201ENST00000390235 94 ntBASIC3.39□□□□□ -1.87
DEPDC4Q8N2C3 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
DEPDC4Q8N2C3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.39□□□□□ -1.87
DEPDC4Q8N2C3 AC093578.1-201ENST00000415219 368 ntBASIC3.39□□□□□ -1.87
DEPDC4Q8N2C3 AC007179.3-201ENST00000604976 235 ntBASIC3.39□□□□□ -1.87
DEPDC4Q8N2C3 SNORA62.6-201ENST00000606322 83 ntBASIC3.39□□□□□ -1.87
DEPDC4Q8N2C3 AL121890.5-201ENST00000620848 304 ntBASIC3.39□□□□□ -1.87
DEPDC4Q8N2C3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.39□□□□□ -1.87
DEPDC4Q8N2C3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
DEPDC4Q8N2C3 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
DEPDC4Q8N2C3 RNU6-862P-201ENST00000362804 105 ntBASIC3.38□□□□□ -1.87
DEPDC4Q8N2C3 SNORA22-201ENST00000383907 134 ntBASIC3.38□□□□□ -1.87
DEPDC4Q8N2C3 RNU6-442P-201ENST00000383968 104 ntBASIC3.38□□□□□ -1.87
DEPDC4Q8N2C3 Y_RNA.410-201ENST00000383992 113 ntBASIC3.38□□□□□ -1.87
DEPDC4Q8N2C3 RNA5SP482-201ENST00000391269 118 ntBASIC3.38□□□□□ -1.87
DEPDC4Q8N2C3 SNORA11.4-201ENST00000408823 129 ntBASIC3.38□□□□□ -1.87
DEPDC4Q8N2C3 RN7SL594P-201ENST00000470590 287 ntBASIC3.38□□□□□ -1.87
DEPDC4Q8N2C3 AL049873.1-201ENST00000480540 376 ntBASIC3.38□□□□□ -1.87
DEPDC4Q8N2C3 RN7SL297P-201ENST00000483161 293 ntBASIC3.38□□□□□ -1.87
DEPDC4Q8N2C3 SCARNA15-202ENST00000516881 127 ntBASIC3.38□□□□□ -1.87
DEPDC4Q8N2C3 MIR5197-201ENST00000583721 112 ntBASIC3.38□□□□□ -1.87
DEPDC4Q8N2C3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
DEPDC4Q8N2C3 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.38□□□□□ -1.87
DEPDC4Q8N2C3 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.38□□□□□ -1.87
DEPDC4Q8N2C3 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
DEPDC4Q8N2C3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
DEPDC4Q8N2C3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.37□□□□□ -1.87
DEPDC4Q8N2C3 RNU6-1164P-201ENST00000364428 107 ntBASIC3.37□□□□□ -1.87
DEPDC4Q8N2C3 RNU6-880P-201ENST00000384526 107 ntBASIC3.37□□□□□ -1.87
DEPDC4Q8N2C3 MIR29C-201ENST00000385231 88 ntBASIC3.37□□□□□ -1.87
DEPDC4Q8N2C3 AC092427.1-202ENST00000430569 476 ntBASIC3.37□□□□□ -1.87
DEPDC4Q8N2C3 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.37□□□□□ -1.87
DEPDC4Q8N2C3 SNORA74D-201ENST00000516404 141 ntBASIC3.37□□□□□ -1.87
DEPDC4Q8N2C3 RNU6-1149P-201ENST00000516810 97 ntBASIC3.37□□□□□ -1.87
DEPDC4Q8N2C3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.37□□□□□ -1.87
DEPDC4Q8N2C3 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.37□□□□□ -1.87
DEPDC4Q8N2C3 AC019176.2-201ENST00000611579 315 ntBASIC3.37□□□□□ -1.87
DEPDC4Q8N2C3 AC134878.1-201ENST00000619901 243 ntBASIC3.37□□□□□ -1.87
DEPDC4Q8N2C3 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
DEPDC4Q8N2C3 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
DEPDC4Q8N2C3 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
DEPDC4Q8N2C3 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
DEPDC4Q8N2C3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
DEPDC4Q8N2C3 RNU6-23P-201ENST00000363283 107 ntBASIC3.36□□□□□ -1.87
DEPDC4Q8N2C3 SNORD14E-201ENST00000364009 85 ntBASIC3.36□□□□□ -1.87
DEPDC4Q8N2C3 RNA5SP267-201ENST00000364893 126 ntBASIC3.36□□□□□ -1.87
DEPDC4Q8N2C3 SNORA73.2-201ENST00000364946 201 ntBASIC3.36□□□□□ -1.87
DEPDC4Q8N2C3 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
DEPDC4Q8N2C3 SNORA48.8-201ENST00000391324 134 ntBASIC3.36□□□□□ -1.87
DEPDC4Q8N2C3 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.36□□□□□ -1.87
DEPDC4Q8N2C3 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.36□□□□□ -1.87
DEPDC4Q8N2C3 AC099677.2-201ENST00000436385 175 ntBASIC3.36□□□□□ -1.87
DEPDC4Q8N2C3 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.36□□□□□ -1.87
DEPDC4Q8N2C3 AC010401.1-201ENST00000463867 348 ntBASIC3.36□□□□□ -1.87
DEPDC4Q8N2C3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.36□□□□□ -1.87
DEPDC4Q8N2C3 AC022217.4-201ENST00000604389 163 ntBASIC3.36□□□□□ -1.87
DEPDC4Q8N2C3 AC012314.7-201ENST00000619693 93 ntBASIC3.36□□□□□ -1.87
DEPDC4Q8N2C3 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.36□□□□□ -1.87
DEPDC4Q8N2C3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
DEPDC4Q8N2C3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
DEPDC4Q8N2C3 AL391516.1-201ENST00000554380 2449 ntBASIC3.35□□□□□ -1.87
DEPDC4Q8N2C3 RNA5SP124-201ENST00000362739 110 ntBASIC3.35□□□□□ -1.87
DEPDC4Q8N2C3 SNORD68-201ENST00000363214 84 ntBASIC3.35□□□□□ -1.87
DEPDC4Q8N2C3 RNA5SP42-201ENST00000364278 115 ntBASIC3.35□□□□□ -1.87
DEPDC4Q8N2C3 snoU2-30.1-201ENST00000365012 70 ntBASIC3.35□□□□□ -1.87
DEPDC4Q8N2C3 Y_RNA.336-201ENST00000365307 109 ntBASIC3.35□□□□□ -1.87
DEPDC4Q8N2C3 MIR491-201ENST00000384877 84 ntBASIC3.35□□□□□ -1.87
DEPDC4Q8N2C3 RN7SKP220-201ENST00000410611 288 ntBASIC3.35□□□□□ -1.87
DEPDC4Q8N2C3 RNA5SP136-201ENST00000410906 107 ntBASIC3.35□□□□□ -1.87
DEPDC4Q8N2C3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.35□□□□□ -1.87
DEPDC4Q8N2C3 AL109933.2-201ENST00000452651 260 ntBASIC3.35□□□□□ -1.87
DEPDC4Q8N2C3 Y_RNA.649-201ENST00000459077 103 ntBASIC3.35□□□□□ -1.87
DEPDC4Q8N2C3 RNU2-27P-201ENST00000516185 142 ntBASIC3.35□□□□□ -1.87
DEPDC4Q8N2C3 AC005786.1-201ENST00000588553 154 ntBASIC3.35□□□□□ -1.87
DEPDC4Q8N2C3 AL121772.2-201ENST00000614331 297 ntBASIC3.35□□□□□ -1.87
DEPDC4Q8N2C3 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.35□□□□□ -1.87
DEPDC4Q8N2C3 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
DEPDC4Q8N2C3 MTND5P18-201ENST00000445624 1801 ntBASIC3.35□□□□□ -1.87
DEPDC4Q8N2C3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
DEPDC4Q8N2C3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms