Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SIX5Q8N196 Y_RNA.253-201ENST00000364562 112 ntBASIC3.5□□□□□ -1.85
SIX5Q8N196 SNORA25B-201ENST00000365507 128 ntBASIC3.5□□□□□ -1.85
SIX5Q8N196 MIR624-201ENST00000385217 97 ntBASIC3.5□□□□□ -1.85
SIX5Q8N196 RNA5SP467-201ENST00000391274 118 ntBASIC3.5□□□□□ -1.85
SIX5Q8N196 AC003685.2-201ENST00000422795 395 ntBASIC3.5□□□□□ -1.85
SIX5Q8N196 TRIAP1P1-201ENST00000427062 225 ntBASIC3.5□□□□□ -1.85
SIX5Q8N196 MRPS17P9-201ENST00000511924 393 ntBASIC3.5□□□□□ -1.85
SIX5Q8N196 AL137790.1-201ENST00000634283 177 ntBASIC3.5□□□□□ -1.85
SIX5Q8N196 MIR338-201ENST00000636369 67 ntBASIC3.5□□□□□ -1.85
SIX5Q8N196 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SIX5Q8N196 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SIX5Q8N196 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SIX5Q8N196 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
SIX5Q8N196 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SIX5Q8N196 RNU6-429P-201ENST00000384582 108 ntBASIC3.49□□□□□ -1.85
SIX5Q8N196 MIR802-201ENST00000390235 94 ntBASIC3.49□□□□□ -1.85
SIX5Q8N196 SNORA12.1-201ENST00000390873 148 ntBASIC3.49□□□□□ -1.85
SIX5Q8N196 SNORA40.5-201ENST00000391061 128 ntBASIC3.49□□□□□ -1.85
SIX5Q8N196 RN7SKP111-201ENST00000410349 271 ntBASIC3.49□□□□□ -1.85
SIX5Q8N196 RNU4-47P-201ENST00000410876 114 ntBASIC3.49□□□□□ -1.85
SIX5Q8N196 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.49□□□□□ -1.85
SIX5Q8N196 AC018634.1-201ENST00000437554 401 ntBASIC3.49□□□□□ -1.85
SIX5Q8N196 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.49□□□□□ -1.85
SIX5Q8N196 ATP5J2P3-201ENST00000451550 258 ntBASIC3.49□□□□□ -1.85
SIX5Q8N196 NDUFA4P2-201ENST00000489989 244 ntBASIC3.49□□□□□ -1.85
SIX5Q8N196 YWHAEP4-201ENST00000505390 198 ntBASIC3.49□□□□□ -1.85
SIX5Q8N196 RNU6-341P-201ENST00000516973 96 ntBASIC3.49□□□□□ -1.85
SIX5Q8N196 AC091178.2-201ENST00000584401 117 ntBASIC3.49□□□□□ -1.85
SIX5Q8N196 AL365205.2-201ENST00000594586 68 ntBASIC3.49□□□□□ -1.85
SIX5Q8N196 AC022217.4-201ENST00000604389 163 ntBASIC3.49□□□□□ -1.85
SIX5Q8N196 AL353149.1-201ENST00000610667 244 ntBASIC3.49□□□□□ -1.85
SIX5Q8N196 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SIX5Q8N196 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SIX5Q8N196 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SIX5Q8N196 Y_RNA.52-201ENST00000362760 96 ntBASIC3.48□□□□□ -1.85
SIX5Q8N196 RNU6-461P-201ENST00000364195 107 ntBASIC3.48□□□□□ -1.85
SIX5Q8N196 RNA5SP125-201ENST00000364843 120 ntBASIC3.48□□□□□ -1.85
SIX5Q8N196 RNA5SP126-201ENST00000365092 109 ntBASIC3.48□□□□□ -1.85
SIX5Q8N196 RNU6-160P-201ENST00000384591 107 ntBASIC3.48□□□□□ -1.85
SIX5Q8N196 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
SIX5Q8N196 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.48□□□□□ -1.85
SIX5Q8N196 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.48□□□□□ -1.85
SIX5Q8N196 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.48□□□□□ -1.85
SIX5Q8N196 AC096725.1-201ENST00000514266 313 ntBASIC3.48□□□□□ -1.85
SIX5Q8N196 RNU7-128P-201ENST00000517247 62 ntBASIC3.48□□□□□ -1.85
SIX5Q8N196 AC007751.1-201ENST00000529260 376 ntBASIC3.48□□□□□ -1.85
SIX5Q8N196 MIR4672-201ENST00000583126 81 ntBASIC3.48□□□□□ -1.85
SIX5Q8N196 AL033523.1-201ENST00000605153 153 ntBASIC3.48□□□□□ -1.85
SIX5Q8N196 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.48□□□□□ -1.85
SIX5Q8N196 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SIX5Q8N196 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SIX5Q8N196 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SIX5Q8N196 SNORA63.4-201ENST00000362763 126 ntBASIC3.47□□□□□ -1.85
SIX5Q8N196 Y_RNA.66-201ENST00000362862 102 ntBASIC3.47□□□□□ -1.85
SIX5Q8N196 Y_RNA.280-201ENST00000364765 112 ntBASIC3.47□□□□□ -1.85
SIX5Q8N196 MIR515-2-201ENST00000384883 83 ntBASIC3.47□□□□□ -1.85
SIX5Q8N196 MIR515-1-201ENST00000384884 83 ntBASIC3.47□□□□□ -1.85
SIX5Q8N196 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.47□□□□□ -1.85
SIX5Q8N196 AC009238.1-201ENST00000442165 424 ntBASIC3.47□□□□□ -1.85
SIX5Q8N196 AC009237.6-201ENST00000446969 424 ntBASIC3.47□□□□□ -1.85
SIX5Q8N196 AC018868.1-201ENST00000491307 315 ntBASIC3.47□□□□□ -1.85
SIX5Q8N196 RN7SL636P-201ENST00000497504 294 ntBASIC3.47□□□□□ -1.85
SIX5Q8N196 PDCD5P2-201ENST00000507570 312 ntBASIC3.47□□□□□ -1.85
SIX5Q8N196 RNU6-579P-201ENST00000516879 102 ntBASIC3.47□□□□□ -1.85
SIX5Q8N196 MIR3129-201ENST00000581095 76 ntBASIC3.47□□□□□ -1.85
SIX5Q8N196 RPL12P50-201ENST00000603116 116 ntBASIC3.47□□□□□ -1.85
SIX5Q8N196 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.47□□□□□ -1.85
SIX5Q8N196 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
SIX5Q8N196 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.47□□□□□ -1.85
SIX5Q8N196 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
SIX5Q8N196 ZNF271P-202ENST00000465539 1970 ntBASIC3.46□□□□□ -1.86
SIX5Q8N196 MIR126-201ENST00000362291 85 ntBASIC3.46□□□□□ -1.86
SIX5Q8N196 SNORA8-201ENST00000384574 139 ntBASIC3.46□□□□□ -1.86
SIX5Q8N196 SNORA44-201ENST00000384584 132 ntBASIC3.46□□□□□ -1.86
SIX5Q8N196 RNY4P18-201ENST00000391107 89 ntBASIC3.46□□□□□ -1.86
SIX5Q8N196 RNU7-94P-201ENST00000459576 63 ntBASIC3.46□□□□□ -1.86
SIX5Q8N196 AC092185.1-201ENST00000491371 97 ntBASIC3.46□□□□□ -1.86
SIX5Q8N196 AC091826.1-201ENST00000514065 313 ntBASIC3.46□□□□□ -1.86
SIX5Q8N196 RN7SKP209-201ENST00000516888 304 ntBASIC3.46□□□□□ -1.86
SIX5Q8N196 Y_RNA.709-201ENST00000516952 92 ntBASIC3.46□□□□□ -1.86
SIX5Q8N196 RNU6-1270P-201ENST00000517128 108 ntBASIC3.46□□□□□ -1.86
SIX5Q8N196 NDUFB9P3-201ENST00000521269 501 ntBASIC3.46□□□□□ -1.86
SIX5Q8N196 AL358944.1-201ENST00000528537 144 ntBASIC3.46□□□□□ -1.86
SIX5Q8N196 AC087685.1-201ENST00000587507 141 ntBASIC3.46□□□□□ -1.86
SIX5Q8N196 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.46□□□□□ -1.86
SIX5Q8N196 AC092435.3-201ENST00000565538 3654 ntBASIC3.46□□□□□ -1.86
SIX5Q8N196 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.45□□□□□ -1.86
SIX5Q8N196 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SIX5Q8N196 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.45□□□□□ -1.86
SIX5Q8N196 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SIX5Q8N196 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
SIX5Q8N196 RNU6-283P-201ENST00000364788 107 ntBASIC3.45□□□□□ -1.86
SIX5Q8N196 AC002075.2-201ENST00000425207 252 ntBASIC3.45□□□□□ -1.86
SIX5Q8N196 AC104332.2-201ENST00000429959 156 ntBASIC3.45□□□□□ -1.86
SIX5Q8N196 RPS29P31-201ENST00000446147 164 ntBASIC3.45□□□□□ -1.86
SIX5Q8N196 RNU1-131P-201ENST00000458943 161 ntBASIC3.45□□□□□ -1.86
SIX5Q8N196 RN7SL594P-201ENST00000470590 287 ntBASIC3.45□□□□□ -1.86
SIX5Q8N196 SNORD33.1-201ENST00000516213 88 ntBASIC3.45□□□□□ -1.86
SIX5Q8N196 RNU2-60P-201ENST00000517290 128 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms