Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 U2.20-201ENST00000613956 192 ntBASIC3.33□□□□□ -1.88
NPAS4Q8IUM7 MIR548AY-201ENST00000617669 107 ntBASIC3.33□□□□□ -1.88
NPAS4Q8IUM7 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NPAS4Q8IUM7 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NPAS4Q8IUM7 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NPAS4Q8IUM7 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
NPAS4Q8IUM7 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
NPAS4Q8IUM7 AL021368.2-201ENST00000606125 5352 ntBASIC3.32□□□□□ -1.88
NPAS4Q8IUM7 MIR30E-201ENST00000362104 92 ntBASIC3.32□□□□□ -1.88
NPAS4Q8IUM7 RNU6-1298P-201ENST00000362456 101 ntBASIC3.32□□□□□ -1.88
NPAS4Q8IUM7 AC060773.1-201ENST00000421698 310 ntBASIC3.32□□□□□ -1.88
NPAS4Q8IUM7 ATP5J2P3-201ENST00000451550 258 ntBASIC3.32□□□□□ -1.88
NPAS4Q8IUM7 RNA5SP356-201ENST00000515972 94 ntBASIC3.32□□□□□ -1.88
NPAS4Q8IUM7 RNU7-115P-201ENST00000516433 55 ntBASIC3.32□□□□□ -1.88
NPAS4Q8IUM7 AL353149.1-201ENST00000610667 244 ntBASIC3.32□□□□□ -1.88
NPAS4Q8IUM7 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.32□□□□□ -1.88
NPAS4Q8IUM7 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NPAS4Q8IUM7 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NPAS4Q8IUM7 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
NPAS4Q8IUM7 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
NPAS4Q8IUM7 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NPAS4Q8IUM7 MIR340-201ENST00000362125 95 ntBASIC3.31□□□□□ -1.88
NPAS4Q8IUM7 RNU6-235P-201ENST00000362644 107 ntBASIC3.31□□□□□ -1.88
NPAS4Q8IUM7 RNU6-1336P-201ENST00000383886 109 ntBASIC3.31□□□□□ -1.88
NPAS4Q8IUM7 RNU6-1323P-201ENST00000384025 107 ntBASIC3.31□□□□□ -1.88
NPAS4Q8IUM7 SNORD116-13-201ENST00000384408 92 ntBASIC3.31□□□□□ -1.88
NPAS4Q8IUM7 RNU6-476P-201ENST00000384726 107 ntBASIC3.31□□□□□ -1.88
NPAS4Q8IUM7 AL109933.2-201ENST00000452651 260 ntBASIC3.31□□□□□ -1.88
NPAS4Q8IUM7 SNRPGP8-201ENST00000454064 226 ntBASIC3.31□□□□□ -1.88
NPAS4Q8IUM7 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.31□□□□□ -1.88
NPAS4Q8IUM7 AC090049.2-201ENST00000550377 109 ntBASIC3.31□□□□□ -1.88
NPAS4Q8IUM7 GTF3AP2-201ENST00000557014 266 ntBASIC3.31□□□□□ -1.88
NPAS4Q8IUM7 AC127455.1-201ENST00000565496 145 ntBASIC3.31□□□□□ -1.88
NPAS4Q8IUM7 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.31□□□□□ -1.88
NPAS4Q8IUM7 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NPAS4Q8IUM7 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
NPAS4Q8IUM7 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.31□□□□□ -1.88
NPAS4Q8IUM7 AC093010.3-201ENST00000570269 15214 ntBASIC3.3□□□□□ -1.88
NPAS4Q8IUM7 RNU1-22P-201ENST00000363334 158 ntBASIC3.3□□□□□ -1.88
NPAS4Q8IUM7 SNORA75.5-201ENST00000391291 81 ntBASIC3.3□□□□□ -1.88
NPAS4Q8IUM7 MIR1262-201ENST00000408276 93 ntBASIC3.3□□□□□ -1.88
NPAS4Q8IUM7 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.3□□□□□ -1.88
NPAS4Q8IUM7 AL135786.1-201ENST00000415892 214 ntBASIC3.3□□□□□ -1.88
NPAS4Q8IUM7 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.3□□□□□ -1.88
NPAS4Q8IUM7 AC018634.1-201ENST00000437554 401 ntBASIC3.3□□□□□ -1.88
NPAS4Q8IUM7 RN7SKP179-201ENST00000516126 217 ntBASIC3.3□□□□□ -1.88
NPAS4Q8IUM7 RNA5SP367-201ENST00000516557 118 ntBASIC3.3□□□□□ -1.88
NPAS4Q8IUM7 ELOCP29-201ENST00000588193 334 ntBASIC3.3□□□□□ -1.88
NPAS4Q8IUM7 U6.73-201ENST00000619194 103 ntBASIC3.3□□□□□ -1.88
NPAS4Q8IUM7 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
NPAS4Q8IUM7 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
NPAS4Q8IUM7 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
NPAS4Q8IUM7 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NPAS4Q8IUM7 AC245060.5-201ENST00000610778 3293 ntBASIC3.29□□□□□ -1.88
NPAS4Q8IUM7 RNU6-23P-201ENST00000363283 107 ntBASIC3.29□□□□□ -1.88
NPAS4Q8IUM7 SNORD45.3-201ENST00000363836 72 ntBASIC3.29□□□□□ -1.88
NPAS4Q8IUM7 RNU6-1144P-201ENST00000384247 104 ntBASIC3.29□□□□□ -1.88
NPAS4Q8IUM7 MIR1278-201ENST00000408753 81 ntBASIC3.29□□□□□ -1.88
NPAS4Q8IUM7 RNU4-43P-201ENST00000410628 137 ntBASIC3.29□□□□□ -1.88
NPAS4Q8IUM7 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.29□□□□□ -1.88
NPAS4Q8IUM7 AL135938.1-201ENST00000443141 297 ntBASIC3.29□□□□□ -1.88
NPAS4Q8IUM7 CYCTP-201ENST00000504253 315 ntBASIC3.29□□□□□ -1.88
NPAS4Q8IUM7 RNU6-1041P-201ENST00000516254 102 ntBASIC3.29□□□□□ -1.88
NPAS4Q8IUM7 MIR3162-201ENST00000581818 82 ntBASIC3.29□□□□□ -1.88
NPAS4Q8IUM7 POLR3GP1-201ENST00000594073 261 ntBASIC3.29□□□□□ -1.88
NPAS4Q8IUM7 AC120024.3-201ENST00000603167 156 ntBASIC3.29□□□□□ -1.88
NPAS4Q8IUM7 AP003357.1-201ENST00000604497 148 ntBASIC3.29□□□□□ -1.88
NPAS4Q8IUM7 AL359075.3-201ENST00000613288 217 ntBASIC3.29□□□□□ -1.88
NPAS4Q8IUM7 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.29□□□□□ -1.88
NPAS4Q8IUM7 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NPAS4Q8IUM7 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NPAS4Q8IUM7 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.28□□□□□ -1.88
NPAS4Q8IUM7 RNA5SP323-201ENST00000391094 133 ntBASIC3.28□□□□□ -1.88
NPAS4Q8IUM7 SNORA11.4-201ENST00000408823 129 ntBASIC3.28□□□□□ -1.88
NPAS4Q8IUM7 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.28□□□□□ -1.88
NPAS4Q8IUM7 Y_RNA.709-201ENST00000516952 92 ntBASIC3.28□□□□□ -1.88
NPAS4Q8IUM7 Y_RNA.712-201ENST00000517011 92 ntBASIC3.28□□□□□ -1.88
NPAS4Q8IUM7 MTND5P34-201ENST00000568888 325 ntBASIC3.28□□□□□ -1.88
NPAS4Q8IUM7 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.28□□□□□ -1.88
NPAS4Q8IUM7 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NPAS4Q8IUM7 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NPAS4Q8IUM7 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
NPAS4Q8IUM7 RNY3P5-201ENST00000384127 102 ntBASIC3.27□□□□□ -1.89
NPAS4Q8IUM7 RNU6-1186P-201ENST00000410429 97 ntBASIC3.27□□□□□ -1.89
NPAS4Q8IUM7 AL158823.1-201ENST00000418441 478 ntBASIC3.27□□□□□ -1.89
NPAS4Q8IUM7 AC090142.3-201ENST00000519012 385 ntBASIC3.27□□□□□ -1.89
NPAS4Q8IUM7 MIR378D2-201ENST00000580636 98 ntBASIC3.27□□□□□ -1.89
NPAS4Q8IUM7 MTND5P32-201ENST00000560711 1802 ntBASIC3.27□□□□□ -1.89
NPAS4Q8IUM7 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NPAS4Q8IUM7 AC108206.1-201ENST00000570186 4159 ntBASIC3.26□□□□□ -1.89
NPAS4Q8IUM7 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
NPAS4Q8IUM7 SNORD115-3-201ENST00000363100 82 ntBASIC3.26□□□□□ -1.89
NPAS4Q8IUM7 SNORA25.7-201ENST00000364375 127 ntBASIC3.26□□□□□ -1.89
NPAS4Q8IUM7 RNU6-117P-201ENST00000365415 107 ntBASIC3.26□□□□□ -1.89
NPAS4Q8IUM7 SNORA22-201ENST00000383907 134 ntBASIC3.26□□□□□ -1.89
NPAS4Q8IUM7 RNU6-851P-201ENST00000384565 107 ntBASIC3.26□□□□□ -1.89
NPAS4Q8IUM7 MIR562-201ENST00000384894 95 ntBASIC3.26□□□□□ -1.89
NPAS4Q8IUM7 MIR520G-201ENST00000385064 90 ntBASIC3.26□□□□□ -1.89
NPAS4Q8IUM7 Y_RNA.584-201ENST00000391090 114 ntBASIC3.26□□□□□ -1.89
NPAS4Q8IUM7 Y_RNA.587-201ENST00000391210 103 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 181.2 ms