Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RNU4-36P-201ENST00000364294 144 ntBASIC3.54□□□□□ -1.84
LYSMD3Q7Z3D4 RNU6-813P-201ENST00000384691 107 ntBASIC3.54□□□□□ -1.84
LYSMD3Q7Z3D4 RPS15AP28-201ENST00000435088 386 ntBASIC3.54□□□□□ -1.84
LYSMD3Q7Z3D4 AC009238.1-201ENST00000442165 424 ntBASIC3.54□□□□□ -1.84
LYSMD3Q7Z3D4 AC009237.6-201ENST00000446969 424 ntBASIC3.54□□□□□ -1.84
LYSMD3Q7Z3D4 AL031183.1-201ENST00000457667 207 ntBASIC3.54□□□□□ -1.84
LYSMD3Q7Z3D4 RNA5SP57-201ENST00000459463 123 ntBASIC3.54□□□□□ -1.84
LYSMD3Q7Z3D4 RNU7-99P-201ENST00000516271 62 ntBASIC3.54□□□□□ -1.84
LYSMD3Q7Z3D4 RNA5SP395-201ENST00000516567 118 ntBASIC3.54□□□□□ -1.84
LYSMD3Q7Z3D4 RNU6-856P-201ENST00000516959 98 ntBASIC3.54□□□□□ -1.84
LYSMD3Q7Z3D4 RNU7-128P-201ENST00000517247 62 ntBASIC3.54□□□□□ -1.84
LYSMD3Q7Z3D4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
LYSMD3Q7Z3D4 MIR7851-201ENST00000610611 160 ntBASIC3.54□□□□□ -1.84
LYSMD3Q7Z3D4 AC073346.2-201ENST00000624724 2058 ntBASIC3.54□□□□□ -1.84
LYSMD3Q7Z3D4 AC018630.2-201ENST00000534866 2403 ntBASIC3.54□□□□□ -1.84
LYSMD3Q7Z3D4 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LYSMD3Q7Z3D4 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LYSMD3Q7Z3D4 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LYSMD3Q7Z3D4 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LYSMD3Q7Z3D4 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.53□□□□□ -1.84
LYSMD3Q7Z3D4 Y_RNA.290-201ENST00000364879 114 ntBASIC3.53□□□□□ -1.84
LYSMD3Q7Z3D4 MIR483-201ENST00000385070 76 ntBASIC3.53□□□□□ -1.84
LYSMD3Q7Z3D4 RNU6-816P-201ENST00000390914 107 ntBASIC3.53□□□□□ -1.84
LYSMD3Q7Z3D4 RNU6-972P-201ENST00000391208 107 ntBASIC3.53□□□□□ -1.84
LYSMD3Q7Z3D4 RNU6-1268P-201ENST00000391214 107 ntBASIC3.53□□□□□ -1.84
LYSMD3Q7Z3D4 RNU6-1239P-201ENST00000391310 107 ntBASIC3.53□□□□□ -1.84
LYSMD3Q7Z3D4 AC060773.1-201ENST00000421698 310 ntBASIC3.53□□□□□ -1.84
LYSMD3Q7Z3D4 AC244505.4-201ENST00000434905 287 ntBASIC3.53□□□□□ -1.84
LYSMD3Q7Z3D4 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.53□□□□□ -1.84
LYSMD3Q7Z3D4 SSXP5-201ENST00000443473 287 ntBASIC3.53□□□□□ -1.84
LYSMD3Q7Z3D4 CYCSP35-201ENST00000451978 304 ntBASIC3.53□□□□□ -1.84
LYSMD3Q7Z3D4 AC010401.1-201ENST00000463867 348 ntBASIC3.53□□□□□ -1.84
LYSMD3Q7Z3D4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.53□□□□□ -1.84
LYSMD3Q7Z3D4 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.53□□□□□ -1.84
LYSMD3Q7Z3D4 RNU7-70P-201ENST00000516941 66 ntBASIC3.53□□□□□ -1.84
LYSMD3Q7Z3D4 Y_RNA.714-201ENST00000517065 90 ntBASIC3.53□□□□□ -1.84
LYSMD3Q7Z3D4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.53□□□□□ -1.84
LYSMD3Q7Z3D4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.53□□□□□ -1.84
LYSMD3Q7Z3D4 AC006111.3-201ENST00000622137 383 ntBASIC3.53□□□□□ -1.84
LYSMD3Q7Z3D4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LYSMD3Q7Z3D4 U6.105-201ENST00000637379 88 ntBASIC3.53□□□□□ -1.84
LYSMD3Q7Z3D4 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.52□□□□□ -1.85
LYSMD3Q7Z3D4 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.52□□□□□ -1.85
LYSMD3Q7Z3D4 RNU1-105P-201ENST00000363470 161 ntBASIC3.52□□□□□ -1.85
LYSMD3Q7Z3D4 Y_RNA.267-201ENST00000364679 109 ntBASIC3.52□□□□□ -1.85
LYSMD3Q7Z3D4 SNORD6-201ENST00000365444 73 ntBASIC3.52□□□□□ -1.85
LYSMD3Q7Z3D4 RNU6-1083P-201ENST00000384022 107 ntBASIC3.52□□□□□ -1.85
LYSMD3Q7Z3D4 SNORA9-201ENST00000384215 133 ntBASIC3.52□□□□□ -1.85
LYSMD3Q7Z3D4 MIR1255A-201ENST00000408338 113 ntBASIC3.52□□□□□ -1.85
LYSMD3Q7Z3D4 MIR1912-201ENST00000410389 80 ntBASIC3.52□□□□□ -1.85
LYSMD3Q7Z3D4 FTH1P12-201ENST00000432137 551 ntBASIC3.52□□□□□ -1.85
LYSMD3Q7Z3D4 RN7SL594P-201ENST00000470590 287 ntBASIC3.52□□□□□ -1.85
LYSMD3Q7Z3D4 AC022137.1-201ENST00000483735 151 ntBASIC3.52□□□□□ -1.85
LYSMD3Q7Z3D4 SCARNA17.1-201ENST00000516211 143 ntBASIC3.52□□□□□ -1.85
LYSMD3Q7Z3D4 SCARNA17.2-201ENST00000516334 143 ntBASIC3.52□□□□□ -1.85
LYSMD3Q7Z3D4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.52□□□□□ -1.85
LYSMD3Q7Z3D4 MIR5047-201ENST00000579212 100 ntBASIC3.52□□□□□ -1.85
LYSMD3Q7Z3D4 AC007229.1-201ENST00000590455 412 ntBASIC3.52□□□□□ -1.85
LYSMD3Q7Z3D4 FAM71BP1-201ENST00000604431 523 ntBASIC3.52□□□□□ -1.85
LYSMD3Q7Z3D4 AL359075.3-201ENST00000613288 217 ntBASIC3.52□□□□□ -1.85
LYSMD3Q7Z3D4 SCARNA17.4-201ENST00000614296 143 ntBASIC3.52□□□□□ -1.85
LYSMD3Q7Z3D4 MIR7975-201ENST00000619350 68 ntBASIC3.52□□□□□ -1.85
LYSMD3Q7Z3D4 MIR6079-201ENST00000635807 62 ntBASIC3.52□□□□□ -1.85
LYSMD3Q7Z3D4 AL353746.1-201ENST00000566293 6881 ntBASIC3.52□□□□□ -1.85
LYSMD3Q7Z3D4 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
LYSMD3Q7Z3D4 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LYSMD3Q7Z3D4 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
LYSMD3Q7Z3D4 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
LYSMD3Q7Z3D4 RNU6-743P-201ENST00000364151 106 ntBASIC3.51□□□□□ -1.85
LYSMD3Q7Z3D4 MIR522-201ENST00000385071 87 ntBASIC3.51□□□□□ -1.85
LYSMD3Q7Z3D4 RNU11-5P-201ENST00000391216 129 ntBASIC3.51□□□□□ -1.85
LYSMD3Q7Z3D4 U3.44-201ENST00000458938 192 ntBASIC3.51□□□□□ -1.85
LYSMD3Q7Z3D4 RPL23AP67-201ENST00000465341 474 ntBASIC3.51□□□□□ -1.85
LYSMD3Q7Z3D4 SNRPGP3-201ENST00000469405 227 ntBASIC3.51□□□□□ -1.85
LYSMD3Q7Z3D4 PHBP14-201ENST00000512887 367 ntBASIC3.51□□□□□ -1.85
LYSMD3Q7Z3D4 RNU2-27P-201ENST00000516185 142 ntBASIC3.51□□□□□ -1.85
LYSMD3Q7Z3D4 RNU7-25P-201ENST00000516544 62 ntBASIC3.51□□□□□ -1.85
LYSMD3Q7Z3D4 RNU6-341P-201ENST00000516973 96 ntBASIC3.51□□□□□ -1.85
LYSMD3Q7Z3D4 SNORA70.24-201ENST00000517233 118 ntBASIC3.51□□□□□ -1.85
LYSMD3Q7Z3D4 AC091544.4-201ENST00000555268 342 ntBASIC3.51□□□□□ -1.85
LYSMD3Q7Z3D4 MIR4305-201ENST00000583252 102 ntBASIC3.51□□□□□ -1.85
LYSMD3Q7Z3D4 MIR3202-2-201ENST00000635980 79 ntBASIC3.51□□□□□ -1.85
LYSMD3Q7Z3D4 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
LYSMD3Q7Z3D4 FAM35CP-201ENST00000554755 2470 ntBASIC3.5□□□□□ -1.85
LYSMD3Q7Z3D4 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.5□□□□□ -1.85
LYSMD3Q7Z3D4 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LYSMD3Q7Z3D4 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.5□□□□□ -1.85
LYSMD3Q7Z3D4 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.5□□□□□ -1.85
LYSMD3Q7Z3D4 Y_RNA.37-201ENST00000362606 108 ntBASIC3.5□□□□□ -1.85
LYSMD3Q7Z3D4 RNU1-133P-201ENST00000364867 167 ntBASIC3.5□□□□□ -1.85
LYSMD3Q7Z3D4 MIR802-201ENST00000390235 94 ntBASIC3.5□□□□□ -1.85
LYSMD3Q7Z3D4 AC123900.1-201ENST00000420390 96 ntBASIC3.5□□□□□ -1.85
LYSMD3Q7Z3D4 AC009414.1-201ENST00000427200 443 ntBASIC3.5□□□□□ -1.85
LYSMD3Q7Z3D4 RNU1-131P-201ENST00000458943 161 ntBASIC3.5□□□□□ -1.85
LYSMD3Q7Z3D4 AC025518.1-201ENST00000479856 347 ntBASIC3.5□□□□□ -1.85
LYSMD3Q7Z3D4 AC093259.1-201ENST00000509755 300 ntBASIC3.5□□□□□ -1.85
LYSMD3Q7Z3D4 AC026333.2-201ENST00000542164 106 ntBASIC3.5□□□□□ -1.85
LYSMD3Q7Z3D4 AC006441.5-201ENST00000612680 209 ntBASIC3.5□□□□□ -1.85
LYSMD3Q7Z3D4 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.5□□□□□ -1.85
LYSMD3Q7Z3D4 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms