Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.04□□□□□ -1.92
RUFY4Q6ZNE9 MIR4438-201ENST00000585271 93 ntBASIC3.04□□□□□ -1.92
RUFY4Q6ZNE9 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RUFY4Q6ZNE9 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
RUFY4Q6ZNE9 RNU4-13P-201ENST00000364019 141 ntBASIC3.03□□□□□ -1.92
RUFY4Q6ZNE9 snoU2_19.4-201ENST00000364329 80 ntBASIC3.03□□□□□ -1.92
RUFY4Q6ZNE9 Y_RNA.272-201ENST00000364696 102 ntBASIC3.03□□□□□ -1.92
RUFY4Q6ZNE9 RNU6-1228P-201ENST00000391014 107 ntBASIC3.03□□□□□ -1.92
RUFY4Q6ZNE9 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.03□□□□□ -1.92
RUFY4Q6ZNE9 AC010409.1-201ENST00000487382 476 ntBASIC3.03□□□□□ -1.92
RUFY4Q6ZNE9 AL353149.1-201ENST00000610667 244 ntBASIC3.03□□□□□ -1.92
RUFY4Q6ZNE9 U6.73-201ENST00000619194 103 ntBASIC3.03□□□□□ -1.92
RUFY4Q6ZNE9 AL161431.1-201ENST00000618966 4205 ntBASIC3.03□□□□□ -1.92
RUFY4Q6ZNE9 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
RUFY4Q6ZNE9 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
RUFY4Q6ZNE9 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RUFY4Q6ZNE9 RNA5SP432-201ENST00000362480 116 ntBASIC3.02□□□□□ -1.93
RUFY4Q6ZNE9 RNU4-84P-201ENST00000364200 139 ntBASIC3.02□□□□□ -1.93
RUFY4Q6ZNE9 SNORA72-201ENST00000384339 132 ntBASIC3.02□□□□□ -1.93
RUFY4Q6ZNE9 RNU5E-9P-201ENST00000411164 104 ntBASIC3.02□□□□□ -1.93
RUFY4Q6ZNE9 AC003982.1-202ENST00000469928 248 ntBASIC3.02□□□□□ -1.93
RUFY4Q6ZNE9 YWHAEP4-201ENST00000505390 198 ntBASIC3.02□□□□□ -1.93
RUFY4Q6ZNE9 AC015720.1-201ENST00000565251 277 ntBASIC3.02□□□□□ -1.93
RUFY4Q6ZNE9 MIR4431-201ENST00000579990 94 ntBASIC3.02□□□□□ -1.93
RUFY4Q6ZNE9 ZNF861P-201ENST00000588126 639 ntBASIC3.02□□□□□ -1.93
RUFY4Q6ZNE9 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.02□□□□□ -1.93
RUFY4Q6ZNE9 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
RUFY4Q6ZNE9 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
RUFY4Q6ZNE9 RNU6-774P-201ENST00000363238 107 ntBASIC3.01□□□□□ -1.93
RUFY4Q6ZNE9 RNU4-10P-201ENST00000364383 140 ntBASIC3.01□□□□□ -1.93
RUFY4Q6ZNE9 SNORD50.2-201ENST00000365465 70 ntBASIC3.01□□□□□ -1.93
RUFY4Q6ZNE9 RNU6-804P-201ENST00000384286 107 ntBASIC3.01□□□□□ -1.93
RUFY4Q6ZNE9 MIR181A2-201ENST00000384863 110 ntBASIC3.01□□□□□ -1.93
RUFY4Q6ZNE9 RNA5SP496-201ENST00000391240 109 ntBASIC3.01□□□□□ -1.93
RUFY4Q6ZNE9 RNA5SP511-201ENST00000410487 115 ntBASIC3.01□□□□□ -1.93
RUFY4Q6ZNE9 AC060773.1-201ENST00000421698 310 ntBASIC3.01□□□□□ -1.93
RUFY4Q6ZNE9 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.01□□□□□ -1.93
RUFY4Q6ZNE9 AC245102.2-201ENST00000448956 180 ntBASIC3.01□□□□□ -1.93
RUFY4Q6ZNE9 RNU6-437P-201ENST00000459408 95 ntBASIC3.01□□□□□ -1.93
RUFY4Q6ZNE9 RPS29P21-201ENST00000496272 170 ntBASIC3.01□□□□□ -1.93
RUFY4Q6ZNE9 AC011406.1-201ENST00000512440 370 ntBASIC3.01□□□□□ -1.93
RUFY4Q6ZNE9 SNORA9.3-201ENST00000516383 129 ntBASIC3.01□□□□□ -1.93
RUFY4Q6ZNE9 RNU7-172P-201ENST00000517125 64 ntBASIC3.01□□□□□ -1.93
RUFY4Q6ZNE9 AC090616.3-201ENST00000582184 217 ntBASIC3.01□□□□□ -1.93
RUFY4Q6ZNE9 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.01□□□□□ -1.93
RUFY4Q6ZNE9 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
RUFY4Q6ZNE9 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
RUFY4Q6ZNE9 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.01□□□□□ -1.93
RUFY4Q6ZNE9 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.01□□□□□ -1.93
RUFY4Q6ZNE9 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
RUFY4Q6ZNE9 snoU2-30.2-201ENST00000362805 70 ntBASIC3□□□□□ -1.93
RUFY4Q6ZNE9 RNU1-96P-201ENST00000364163 162 ntBASIC3□□□□□ -1.93
RUFY4Q6ZNE9 RNU6-376P-201ENST00000384731 106 ntBASIC3□□□□□ -1.93
RUFY4Q6ZNE9 AL512604.1-201ENST00000404812 257 ntBASIC3□□□□□ -1.93
RUFY4Q6ZNE9 UBL5P3-201ENST00000475112 231 ntBASIC3□□□□□ -1.93
RUFY4Q6ZNE9 RPL23AP54-201ENST00000495129 419 ntBASIC3□□□□□ -1.93
RUFY4Q6ZNE9 RN7SL636P-201ENST00000497504 294 ntBASIC3□□□□□ -1.93
RUFY4Q6ZNE9 AC091544.4-201ENST00000555268 342 ntBASIC3□□□□□ -1.93
RUFY4Q6ZNE9 AC104465.1-201ENST00000611365 139 ntBASIC3□□□□□ -1.93
RUFY4Q6ZNE9 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RUFY4Q6ZNE9 Y_RNA.229-201ENST00000364347 113 ntBASIC2.99□□□□□ -1.93
RUFY4Q6ZNE9 RNU6-1180P-201ENST00000364935 107 ntBASIC2.99□□□□□ -1.93
RUFY4Q6ZNE9 SNORA70B-201ENST00000384210 135 ntBASIC2.99□□□□□ -1.93
RUFY4Q6ZNE9 RNU6-160P-201ENST00000384591 107 ntBASIC2.99□□□□□ -1.93
RUFY4Q6ZNE9 RNU6-239P-201ENST00000390990 99 ntBASIC2.99□□□□□ -1.93
RUFY4Q6ZNE9 AC104389.3-201ENST00000445629 235 ntBASIC2.99□□□□□ -1.93
RUFY4Q6ZNE9 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.99□□□□□ -1.93
RUFY4Q6ZNE9 RNU6-63P-201ENST00000516690 95 ntBASIC2.99□□□□□ -1.93
RUFY4Q6ZNE9 AC109810.1-201ENST00000534066 224 ntBASIC2.99□□□□□ -1.93
RUFY4Q6ZNE9 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.99□□□□□ -1.93
RUFY4Q6ZNE9 MIR6817-201ENST00000615588 66 ntBASIC2.99□□□□□ -1.93
RUFY4Q6ZNE9 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
RUFY4Q6ZNE9 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RUFY4Q6ZNE9 RNA5SP68-201ENST00000363885 119 ntBASIC2.98□□□□□ -1.93
RUFY4Q6ZNE9 RNU6-449P-201ENST00000383914 107 ntBASIC2.98□□□□□ -1.93
RUFY4Q6ZNE9 Y_RNA.398-201ENST00000383952 99 ntBASIC2.98□□□□□ -1.93
RUFY4Q6ZNE9 MIR613-201ENST00000385248 95 ntBASIC2.98□□□□□ -1.93
RUFY4Q6ZNE9 SEPT7P4-201ENST00000437076 306 ntBASIC2.98□□□□□ -1.93
RUFY4Q6ZNE9 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.98□□□□□ -1.93
RUFY4Q6ZNE9 AL513328.1-201ENST00000446460 224 ntBASIC2.98□□□□□ -1.93
RUFY4Q6ZNE9 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.98□□□□□ -1.93
RUFY4Q6ZNE9 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.98□□□□□ -1.93
RUFY4Q6ZNE9 SCARNA8-201ENST00000515924 131 ntBASIC2.98□□□□□ -1.93
RUFY4Q6ZNE9 RNA5SP148-201ENST00000516527 94 ntBASIC2.98□□□□□ -1.93
RUFY4Q6ZNE9 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.98□□□□□ -1.93
RUFY4Q6ZNE9 MIR2681-201ENST00000581814 105 ntBASIC2.98□□□□□ -1.93
RUFY4Q6ZNE9 AC007229.1-201ENST00000590455 412 ntBASIC2.98□□□□□ -1.93
RUFY4Q6ZNE9 AL590808.1-201ENST00000618696 141 ntBASIC2.98□□□□□ -1.93
RUFY4Q6ZNE9 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.98□□□□□ -1.93
RUFY4Q6ZNE9 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RUFY4Q6ZNE9 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RUFY4Q6ZNE9 MIR515-2-201ENST00000384883 83 ntBASIC2.97□□□□□ -1.93
RUFY4Q6ZNE9 MIR515-1-201ENST00000384884 83 ntBASIC2.97□□□□□ -1.93
RUFY4Q6ZNE9 MIR520G-201ENST00000385064 90 ntBASIC2.97□□□□□ -1.93
RUFY4Q6ZNE9 AC018634.1-201ENST00000437554 401 ntBASIC2.97□□□□□ -1.93
RUFY4Q6ZNE9 HMGN2P34-201ENST00000437647 269 ntBASIC2.97□□□□□ -1.93
RUFY4Q6ZNE9 RNU7-99P-201ENST00000516271 62 ntBASIC2.97□□□□□ -1.93
RUFY4Q6ZNE9 RNU6-1007P-201ENST00000516586 107 ntBASIC2.97□□□□□ -1.93
RUFY4Q6ZNE9 RNU7-121P-201ENST00000516604 62 ntBASIC2.97□□□□□ -1.93
RUFY4Q6ZNE9 AC026271.5-201ENST00000577873 130 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 212.1 ms