Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 SNORA4.4-201ENST00000515921 135 ntBASIC3.44□□□□□ -1.86
USPL1Q5W0Q7 SNORA25.12-201ENST00000516202 82 ntBASIC3.44□□□□□ -1.86
USPL1Q5W0Q7 AL160236.1-201ENST00000556317 195 ntBASIC3.44□□□□□ -1.86
USPL1Q5W0Q7 AC015720.1-201ENST00000565251 277 ntBASIC3.44□□□□□ -1.86
USPL1Q5W0Q7 MIR2681-201ENST00000581814 105 ntBASIC3.44□□□□□ -1.86
USPL1Q5W0Q7 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.44□□□□□ -1.86
USPL1Q5W0Q7 AC092435.3-201ENST00000565538 3654 ntBASIC3.43□□□□□ -1.86
USPL1Q5W0Q7 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
USPL1Q5W0Q7 Y_RNA.332-201ENST00000365271 113 ntBASIC3.43□□□□□ -1.86
USPL1Q5W0Q7 Y_RNA.393-201ENST00000383936 102 ntBASIC3.43□□□□□ -1.86
USPL1Q5W0Q7 SNORD21-201ENST00000383953 95 ntBASIC3.43□□□□□ -1.86
USPL1Q5W0Q7 MIR181A2-201ENST00000384863 110 ntBASIC3.43□□□□□ -1.86
USPL1Q5W0Q7 MIR512-1-201ENST00000384913 84 ntBASIC3.43□□□□□ -1.86
USPL1Q5W0Q7 AC016909.1-201ENST00000415916 166 ntBASIC3.43□□□□□ -1.86
USPL1Q5W0Q7 AC090515.1-201ENST00000465295 476 ntBASIC3.43□□□□□ -1.86
USPL1Q5W0Q7 AC006483.1-201ENST00000487308 313 ntBASIC3.43□□□□□ -1.86
USPL1Q5W0Q7 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.43□□□□□ -1.86
USPL1Q5W0Q7 AC023141.11-201ENST00000508864 202 ntBASIC3.43□□□□□ -1.86
USPL1Q5W0Q7 AC093259.1-201ENST00000509755 300 ntBASIC3.43□□□□□ -1.86
USPL1Q5W0Q7 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.43□□□□□ -1.86
USPL1Q5W0Q7 RNU6-965P-201ENST00000516721 96 ntBASIC3.43□□□□□ -1.86
USPL1Q5W0Q7 AC027419.1-201ENST00000522976 328 ntBASIC3.43□□□□□ -1.86
USPL1Q5W0Q7 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.43□□□□□ -1.86
USPL1Q5W0Q7 TUG1_4.1-201ENST00000619464 181 ntBASIC3.43□□□□□ -1.86
USPL1Q5W0Q7 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
USPL1Q5W0Q7 MIR3658-201ENST00000636291 56 ntBASIC3.43□□□□□ -1.86
USPL1Q5W0Q7 MIR6844-201ENST00000637122 62 ntBASIC3.43□□□□□ -1.86
USPL1Q5W0Q7 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.43□□□□□ -1.86
USPL1Q5W0Q7 RNU4-41P-201ENST00000364426 143 ntBASIC3.42□□□□□ -1.86
USPL1Q5W0Q7 Y_RNA.521-201ENST00000384560 114 ntBASIC3.42□□□□□ -1.86
USPL1Q5W0Q7 RNU11-5P-201ENST00000391216 129 ntBASIC3.42□□□□□ -1.86
USPL1Q5W0Q7 MTND4LP9-201ENST00000427694 174 ntBASIC3.42□□□□□ -1.86
USPL1Q5W0Q7 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.42□□□□□ -1.86
USPL1Q5W0Q7 NDUFA5P6-201ENST00000542110 379 ntBASIC3.42□□□□□ -1.86
USPL1Q5W0Q7 MIR3616-201ENST00000584070 92 ntBASIC3.42□□□□□ -1.86
USPL1Q5W0Q7 ZNF861P-201ENST00000588126 639 ntBASIC3.42□□□□□ -1.86
USPL1Q5W0Q7 AL021707.8-201ENST00000609428 183 ntBASIC3.42□□□□□ -1.86
USPL1Q5W0Q7 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
USPL1Q5W0Q7 AC100821.1-201ENST00000523153 2479 ntBASIC3.41□□□□□ -1.86
USPL1Q5W0Q7 RNU1-22P-201ENST00000363334 158 ntBASIC3.41□□□□□ -1.86
USPL1Q5W0Q7 RNU6-597P-201ENST00000365620 102 ntBASIC3.41□□□□□ -1.86
USPL1Q5W0Q7 SNORA3.2-201ENST00000408221 125 ntBASIC3.41□□□□□ -1.86
USPL1Q5W0Q7 RNA5SP511-201ENST00000410487 115 ntBASIC3.41□□□□□ -1.86
USPL1Q5W0Q7 AC244505.4-201ENST00000434905 287 ntBASIC3.41□□□□□ -1.86
USPL1Q5W0Q7 SSXP5-201ENST00000443473 287 ntBASIC3.41□□□□□ -1.86
USPL1Q5W0Q7 RNU7-197P-201ENST00000458836 62 ntBASIC3.41□□□□□ -1.86
USPL1Q5W0Q7 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.41□□□□□ -1.86
USPL1Q5W0Q7 RNU6-561P-201ENST00000516222 102 ntBASIC3.41□□□□□ -1.86
USPL1Q5W0Q7 RNU6-1146P-201ENST00000516282 102 ntBASIC3.41□□□□□ -1.86
USPL1Q5W0Q7 RNU6-856P-201ENST00000516959 98 ntBASIC3.41□□□□□ -1.86
USPL1Q5W0Q7 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.41□□□□□ -1.86
USPL1Q5W0Q7 MIR7843-201ENST00000622274 79 ntBASIC3.41□□□□□ -1.86
USPL1Q5W0Q7 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
USPL1Q5W0Q7 SNORD45.3-201ENST00000363836 72 ntBASIC3.4□□□□□ -1.87
USPL1Q5W0Q7 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.4□□□□□ -1.87
USPL1Q5W0Q7 SNORA22C-201ENST00000384614 134 ntBASIC3.4□□□□□ -1.87
USPL1Q5W0Q7 SNORA75.5-201ENST00000391291 81 ntBASIC3.4□□□□□ -1.87
USPL1Q5W0Q7 Y_RNA.629-201ENST00000411368 105 ntBASIC3.4□□□□□ -1.87
USPL1Q5W0Q7 AC023449.1-201ENST00000454464 154 ntBASIC3.4□□□□□ -1.87
USPL1Q5W0Q7 AC003982.1-202ENST00000469928 248 ntBASIC3.4□□□□□ -1.87
USPL1Q5W0Q7 RPS29P21-201ENST00000496272 170 ntBASIC3.4□□□□□ -1.87
USPL1Q5W0Q7 AC097462.1-201ENST00000514125 324 ntBASIC3.4□□□□□ -1.87
USPL1Q5W0Q7 MIR4438-201ENST00000585271 93 ntBASIC3.4□□□□□ -1.87
USPL1Q5W0Q7 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
USPL1Q5W0Q7 MIR561-201ENST00000385216 97 ntBASIC3.39□□□□□ -1.87
USPL1Q5W0Q7 AL590004.2-201ENST00000404787 371 ntBASIC3.39□□□□□ -1.87
USPL1Q5W0Q7 AC092185.1-201ENST00000491371 97 ntBASIC3.39□□□□□ -1.87
USPL1Q5W0Q7 RNU6-126P-201ENST00000516685 103 ntBASIC3.39□□□□□ -1.87
USPL1Q5W0Q7 RNU6-63P-201ENST00000516690 95 ntBASIC3.39□□□□□ -1.87
USPL1Q5W0Q7 RNU7-172P-201ENST00000517125 64 ntBASIC3.39□□□□□ -1.87
USPL1Q5W0Q7 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.39□□□□□ -1.87
USPL1Q5W0Q7 MIR378D2-201ENST00000580636 98 ntBASIC3.39□□□□□ -1.87
USPL1Q5W0Q7 AP001340.1-201ENST00000624405 217 ntBASIC3.39□□□□□ -1.87
USPL1Q5W0Q7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.39□□□□□ -1.87
USPL1Q5W0Q7 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
USPL1Q5W0Q7 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
USPL1Q5W0Q7 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
USPL1Q5W0Q7 RNA5SP289-201ENST00000362332 137 ntBASIC3.38□□□□□ -1.87
USPL1Q5W0Q7 U8.2-201ENST00000363156 134 ntBASIC3.38□□□□□ -1.87
USPL1Q5W0Q7 Y_RNA.420-201ENST00000384043 110 ntBASIC3.38□□□□□ -1.87
USPL1Q5W0Q7 RNU6-768P-201ENST00000384683 107 ntBASIC3.38□□□□□ -1.87
USPL1Q5W0Q7 SNRPGP8-201ENST00000454064 226 ntBASIC3.38□□□□□ -1.87
USPL1Q5W0Q7 snoU13.26-201ENST00000459452 105 ntBASIC3.38□□□□□ -1.87
USPL1Q5W0Q7 RNU6-197P-201ENST00000516680 100 ntBASIC3.38□□□□□ -1.87
USPL1Q5W0Q7 PRELID2P1-201ENST00000552837 301 ntBASIC3.38□□□□□ -1.87
USPL1Q5W0Q7 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.38□□□□□ -1.87
USPL1Q5W0Q7 AL365222.1-201ENST00000614661 98 ntBASIC3.38□□□□□ -1.87
USPL1Q5W0Q7 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.38□□□□□ -1.87
USPL1Q5W0Q7 ZNF658B-202ENST00000615961 3375 ntBASIC3.38□□□□□ -1.87
USPL1Q5W0Q7 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
USPL1Q5W0Q7 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
USPL1Q5W0Q7 RNU6-1290P-201ENST00000362957 109 ntBASIC3.37□□□□□ -1.87
USPL1Q5W0Q7 Y_RNA.587-201ENST00000391210 103 ntBASIC3.37□□□□□ -1.87
USPL1Q5W0Q7 MIR1253-201ENST00000408273 105 ntBASIC3.37□□□□□ -1.87
USPL1Q5W0Q7 RNU6-237P-201ENST00000515985 71 ntBASIC3.37□□□□□ -1.87
USPL1Q5W0Q7 RNA5SP272-201ENST00000516095 111 ntBASIC3.37□□□□□ -1.87
USPL1Q5W0Q7 RNA5SP153-201ENST00000516498 76 ntBASIC3.37□□□□□ -1.87
USPL1Q5W0Q7 U2.20-201ENST00000613956 192 ntBASIC3.37□□□□□ -1.87
USPL1Q5W0Q7 U6.73-201ENST00000619194 103 ntBASIC3.37□□□□□ -1.87
USPL1Q5W0Q7 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms