Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 PPIAP15-201ENST00000479662 484 ntBASIC4.23□□□□□ -1.73
VARS2Q5ST30 RN7SL323P-201ENST00000494712 295 ntBASIC4.23□□□□□ -1.73
VARS2Q5ST30 RNU6-856P-201ENST00000516959 98 ntBASIC4.23□□□□□ -1.73
VARS2Q5ST30 AC026403.1-201ENST00000518938 295 ntBASIC4.23□□□□□ -1.73
VARS2Q5ST30 AC007536.1-201ENST00000533382 349 ntBASIC4.23□□□□□ -1.73
VARS2Q5ST30 uc_338.14-201ENST00000613162 166 ntBASIC4.23□□□□□ -1.73
VARS2Q5ST30 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VARS2Q5ST30 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
VARS2Q5ST30 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VARS2Q5ST30 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.23□□□□□ -1.73
VARS2Q5ST30 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
VARS2Q5ST30 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.23□□□□□ -1.73
VARS2Q5ST30 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
VARS2Q5ST30 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.22□□□□□ -1.73
VARS2Q5ST30 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.22□□□□□ -1.73
VARS2Q5ST30 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
VARS2Q5ST30 MIR30B-201ENST00000384850 88 ntBASIC4.22□□□□□ -1.73
VARS2Q5ST30 MIR513A2-201ENST00000385249 127 ntBASIC4.22□□□□□ -1.73
VARS2Q5ST30 RNU6-1307P-201ENST00000391012 103 ntBASIC4.22□□□□□ -1.73
VARS2Q5ST30 AC106707.2-201ENST00000484182 374 ntBASIC4.22□□□□□ -1.73
VARS2Q5ST30 RN7SKP18-201ENST00000516005 275 ntBASIC4.22□□□□□ -1.73
VARS2Q5ST30 RNA5SP468-201ENST00000516782 93 ntBASIC4.22□□□□□ -1.73
VARS2Q5ST30 RNU6-90P-201ENST00000606352 106 ntBASIC4.22□□□□□ -1.73
VARS2Q5ST30 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.22□□□□□ -1.73
VARS2Q5ST30 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VARS2Q5ST30 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VARS2Q5ST30 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.22□□□□□ -1.73
VARS2Q5ST30 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
VARS2Q5ST30 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.21□□□□□ -1.73
VARS2Q5ST30 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VARS2Q5ST30 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
VARS2Q5ST30 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VARS2Q5ST30 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.21□□□□□ -1.74
VARS2Q5ST30 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
VARS2Q5ST30 SNORD115-34-201ENST00000362441 82 ntBASIC4.21□□□□□ -1.74
VARS2Q5ST30 SNORD115-12-201ENST00000362583 82 ntBASIC4.21□□□□□ -1.74
VARS2Q5ST30 SNORD115-29-201ENST00000362834 82 ntBASIC4.21□□□□□ -1.74
VARS2Q5ST30 SNORD115-9-201ENST00000362912 82 ntBASIC4.21□□□□□ -1.74
VARS2Q5ST30 SNORD115-21-201ENST00000362963 81 ntBASIC4.21□□□□□ -1.74
VARS2Q5ST30 SNORD115-14-201ENST00000363090 81 ntBASIC4.21□□□□□ -1.74
VARS2Q5ST30 SNORD115-41-201ENST00000363608 82 ntBASIC4.21□□□□□ -1.74
VARS2Q5ST30 SNORD115-11-201ENST00000363616 82 ntBASIC4.21□□□□□ -1.74
VARS2Q5ST30 SNORD115-5-201ENST00000363633 82 ntBASIC4.21□□□□□ -1.74
VARS2Q5ST30 SNORD115-4-201ENST00000363810 82 ntBASIC4.21□□□□□ -1.74
VARS2Q5ST30 SNORD115-6-201ENST00000363942 82 ntBASIC4.21□□□□□ -1.74
VARS2Q5ST30 SNORD115-42-201ENST00000364273 82 ntBASIC4.21□□□□□ -1.74
VARS2Q5ST30 RNA5SP72-201ENST00000364442 117 ntBASIC4.21□□□□□ -1.74
VARS2Q5ST30 SNORD115-15-201ENST00000364809 81 ntBASIC4.21□□□□□ -1.74
VARS2Q5ST30 SNORD115-26-201ENST00000365067 82 ntBASIC4.21□□□□□ -1.74
VARS2Q5ST30 SNORD115-10-201ENST00000365073 81 ntBASIC4.21□□□□□ -1.74
VARS2Q5ST30 SNORD115-43-201ENST00000365503 82 ntBASIC4.21□□□□□ -1.74
VARS2Q5ST30 SNORD115-36-201ENST00000365629 82 ntBASIC4.21□□□□□ -1.74
VARS2Q5ST30 SNORA32-201ENST00000384072 121 ntBASIC4.21□□□□□ -1.74
VARS2Q5ST30 Y_RNA.494-201ENST00000384432 111 ntBASIC4.21□□□□□ -1.74
VARS2Q5ST30 SNORA80E-201ENST00000384744 137 ntBASIC4.21□□□□□ -1.74
VARS2Q5ST30 MIR9-2-201ENST00000384838 87 ntBASIC4.21□□□□□ -1.74
VARS2Q5ST30 RNU6-587P-201ENST00000391282 106 ntBASIC4.21□□□□□ -1.74
VARS2Q5ST30 RN7SKP111-201ENST00000410349 271 ntBASIC4.21□□□□□ -1.74
VARS2Q5ST30 SNORA57.3-201ENST00000411095 141 ntBASIC4.21□□□□□ -1.74
VARS2Q5ST30 RNA5SP39-201ENST00000411245 120 ntBASIC4.21□□□□□ -1.74
VARS2Q5ST30 AC097463.2-201ENST00000421074 142 ntBASIC4.21□□□□□ -1.74
VARS2Q5ST30 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.21□□□□□ -1.74
VARS2Q5ST30 HMGN2P18-201ENST00000450680 270 ntBASIC4.21□□□□□ -1.74
VARS2Q5ST30 AC090821.2-201ENST00000523552 176 ntBASIC4.21□□□□□ -1.74
VARS2Q5ST30 CYCSP30-201ENST00000546447 172 ntBASIC4.21□□□□□ -1.74
VARS2Q5ST30 AC103810.6-201ENST00000606708 136 ntBASIC4.21□□□□□ -1.74
VARS2Q5ST30 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VARS2Q5ST30 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VARS2Q5ST30 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
VARS2Q5ST30 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VARS2Q5ST30 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.2□□□□□ -1.74
VARS2Q5ST30 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
VARS2Q5ST30 MAPK10-372ENST00000641954 3413 ntBASIC4.2□□□□□ -1.74
VARS2Q5ST30 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
VARS2Q5ST30 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.2□□□□□ -1.74
VARS2Q5ST30 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
VARS2Q5ST30 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC4.2□□□□□ -1.74
VARS2Q5ST30 Y_RNA.173-201ENST00000363776 113 ntBASIC4.2□□□□□ -1.74
VARS2Q5ST30 RNA5SP97-201ENST00000365006 84 ntBASIC4.2□□□□□ -1.74
VARS2Q5ST30 MIR181B2-201ENST00000385004 89 ntBASIC4.2□□□□□ -1.74
VARS2Q5ST30 HLA-N-201ENST00000437516 135 ntBASIC4.2□□□□□ -1.74
VARS2Q5ST30 AC093423.1-201ENST00000440817 142 ntBASIC4.2□□□□□ -1.74
VARS2Q5ST30 SNORA4.4-201ENST00000515921 135 ntBASIC4.2□□□□□ -1.74
VARS2Q5ST30 Y_RNA.660-201ENST00000516002 120 ntBASIC4.2□□□□□ -1.74
VARS2Q5ST30 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
VARS2Q5ST30 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
VARS2Q5ST30 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
VARS2Q5ST30 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
VARS2Q5ST30 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
VARS2Q5ST30 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
VARS2Q5ST30 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.19□□□□□ -1.74
VARS2Q5ST30 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
VARS2Q5ST30 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
VARS2Q5ST30 RNU6-50P-201ENST00000362356 103 ntBASIC4.19□□□□□ -1.74
VARS2Q5ST30 RNU5F-1-201ENST00000362507 117 ntBASIC4.19□□□□□ -1.74
VARS2Q5ST30 Y_RNA.168-201ENST00000363740 102 ntBASIC4.19□□□□□ -1.74
VARS2Q5ST30 MIR1251-201ENST00000408552 70 ntBASIC4.19□□□□□ -1.74
VARS2Q5ST30 AC060773.1-201ENST00000421698 310 ntBASIC4.19□□□□□ -1.74
VARS2Q5ST30 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.19□□□□□ -1.74
VARS2Q5ST30 RNU7-34P-201ENST00000459394 64 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms