Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
RUNDC3AQ59EK9 AC022254.1-201ENST00000567857 235 ntBASIC1.95□□□□□ -2.1
RUNDC3AQ59EK9 MIR4299-201ENST00000577899 72 ntBASIC1.95□□□□□ -2.1
RUNDC3AQ59EK9 MIR4513-201ENST00000581077 86 ntBASIC1.95□□□□□ -2.1
RUNDC3AQ59EK9 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.95□□□□□ -2.1
RUNDC3AQ59EK9 AC005034.5-201ENST00000604219 466 ntBASIC1.95□□□□□ -2.1
RUNDC3AQ59EK9 AC022217.4-201ENST00000604389 163 ntBASIC1.95□□□□□ -2.1
RUNDC3AQ59EK9 Y_RNA.136-201ENST00000363444 102 ntBASIC1.94□□□□□ -2.1
RUNDC3AQ59EK9 RNA5SP126-201ENST00000365092 109 ntBASIC1.94□□□□□ -2.1
RUNDC3AQ59EK9 RNU6-472P-201ENST00000384299 107 ntBASIC1.94□□□□□ -2.1
RUNDC3AQ59EK9 MIR520A-201ENST00000384862 85 ntBASIC1.94□□□□□ -2.1
RUNDC3AQ59EK9 MT-TW-201ENST00000387382 68 ntBASIC1.94□□□□□ -2.1
RUNDC3AQ59EK9 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
RUNDC3AQ59EK9 RNA5SP109-201ENST00000391010 116 ntBASIC1.94□□□□□ -2.1
RUNDC3AQ59EK9 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.94□□□□□ -2.1
RUNDC3AQ59EK9 MTND3P2-201ENST00000438452 342 ntBASIC1.94□□□□□ -2.1
RUNDC3AQ59EK9 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.94□□□□□ -2.1
RUNDC3AQ59EK9 RNA5SP57-201ENST00000459463 123 ntBASIC1.94□□□□□ -2.1
RUNDC3AQ59EK9 RNU6-1278P-201ENST00000516130 107 ntBASIC1.94□□□□□ -2.1
RUNDC3AQ59EK9 AL161670.1-201ENST00000554348 137 ntBASIC1.94□□□□□ -2.1
RUNDC3AQ59EK9 AC010900.2-201ENST00000604508 210 ntBASIC1.94□□□□□ -2.1
RUNDC3AQ59EK9 AC004832.4-201ENST00000608952 331 ntBASIC1.94□□□□□ -2.1
RUNDC3AQ59EK9 AP001282.2-201ENST00000616149 309 ntBASIC1.94□□□□□ -2.1
RUNDC3AQ59EK9 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
RUNDC3AQ59EK9 Y_RNA.396-201ENST00000383949 103 ntBASIC1.93□□□□□ -2.1
RUNDC3AQ59EK9 Y_RNA.461-201ENST00000384263 103 ntBASIC1.93□□□□□ -2.1
RUNDC3AQ59EK9 Y_RNA.483-201ENST00000384380 101 ntBASIC1.93□□□□□ -2.1
RUNDC3AQ59EK9 RNU6-376P-201ENST00000384731 106 ntBASIC1.93□□□□□ -2.1
RUNDC3AQ59EK9 RNA5SP212-201ENST00000391223 107 ntBASIC1.93□□□□□ -2.1
RUNDC3AQ59EK9 RNU6-855P-201ENST00000410395 104 ntBASIC1.93□□□□□ -2.1
RUNDC3AQ59EK9 RNU6-710P-201ENST00000410424 105 ntBASIC1.93□□□□□ -2.1
RUNDC3AQ59EK9 RNA5SP511-201ENST00000410487 115 ntBASIC1.93□□□□□ -2.1
RUNDC3AQ59EK9 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.93□□□□□ -2.1
RUNDC3AQ59EK9 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.93□□□□□ -2.1
RUNDC3AQ59EK9 AC010154.1-201ENST00000425857 269 ntBASIC1.93□□□□□ -2.1
RUNDC3AQ59EK9 MTCO1P5-201ENST00000433573 344 ntBASIC1.93□□□□□ -2.1
RUNDC3AQ59EK9 AC069257.2-201ENST00000441819 155 ntBASIC1.93□□□□□ -2.1
RUNDC3AQ59EK9 TRBVB-201ENST00000477100 408 ntBASIC1.93□□□□□ -2.1
RUNDC3AQ59EK9 RNU6-191P-201ENST00000516295 94 ntBASIC1.93□□□□□ -2.1
RUNDC3AQ59EK9 MIR3935-201ENST00000583472 104 ntBASIC1.93□□□□□ -2.1
RUNDC3AQ59EK9 MIR6873-201ENST00000622788 63 ntBASIC1.93□□□□□ -2.1
RUNDC3AQ59EK9 AC018630.2-201ENST00000534866 2403 ntBASIC1.93□□□□□ -2.1
RUNDC3AQ59EK9 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
RUNDC3AQ59EK9 SNORA4.2-201ENST00000365313 147 ntBASIC1.92□□□□□ -2.1
RUNDC3AQ59EK9 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.92□□□□□ -2.1
RUNDC3AQ59EK9 AL135786.1-201ENST00000415892 214 ntBASIC1.92□□□□□ -2.1
RUNDC3AQ59EK9 Z98742.3-201ENST00000418637 326 ntBASIC1.92□□□□□ -2.1
RUNDC3AQ59EK9 RPS20P10-201ENST00000451209 253 ntBASIC1.92□□□□□ -2.1
RUNDC3AQ59EK9 AC091021.1-201ENST00000468051 388 ntBASIC1.92□□□□□ -2.1
RUNDC3AQ59EK9 RNU6-1338P-201ENST00000516328 91 ntBASIC1.92□□□□□ -2.1
RUNDC3AQ59EK9 RNU2-31P-201ENST00000516954 155 ntBASIC1.92□□□□□ -2.1
RUNDC3AQ59EK9 IGKV3-31-201ENST00000523109 329 ntBASIC1.92□□□□□ -2.1
RUNDC3AQ59EK9 AC091544.4-201ENST00000555268 342 ntBASIC1.92□□□□□ -2.1
RUNDC3AQ59EK9 AC015720.1-201ENST00000565251 277 ntBASIC1.92□□□□□ -2.1
RUNDC3AQ59EK9 AC091178.2-201ENST00000584401 117 ntBASIC1.92□□□□□ -2.1
RUNDC3AQ59EK9 AL162730.1-201ENST00000605734 292 ntBASIC1.92□□□□□ -2.1
RUNDC3AQ59EK9 MIR6079-201ENST00000635807 62 ntBASIC1.92□□□□□ -2.1
RUNDC3AQ59EK9 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
RUNDC3AQ59EK9 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
RUNDC3AQ59EK9 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
RUNDC3AQ59EK9 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
RUNDC3AQ59EK9 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
RUNDC3AQ59EK9 Y_RNA.310-201ENST00000365063 113 ntBASIC1.91□□□□□ -2.1
RUNDC3AQ59EK9 RNU6-326P-201ENST00000365480 107 ntBASIC1.91□□□□□ -2.1
RUNDC3AQ59EK9 Y_RNA.368-201ENST00000365547 113 ntBASIC1.91□□□□□ -2.1
RUNDC3AQ59EK9 RNU6-136P-201ENST00000384663 107 ntBASIC1.91□□□□□ -2.1
RUNDC3AQ59EK9 SUMO2P12-201ENST00000405924 140 ntBASIC1.91□□□□□ -2.1
RUNDC3AQ59EK9 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.91□□□□□ -2.1
RUNDC3AQ59EK9 AL162725.1-201ENST00000435405 301 ntBASIC1.91□□□□□ -2.1
RUNDC3AQ59EK9 RN7SL274P-201ENST00000492268 272 ntBASIC1.91□□□□□ -2.1
RUNDC3AQ59EK9 RPL21P9-201ENST00000556149 474 ntBASIC1.91□□□□□ -2.1
RUNDC3AQ59EK9 Y_RNA.518-201ENST00000384552 113 ntBASIC1.9□□□□□ -2.11
RUNDC3AQ59EK9 snosnR66.1-201ENST00000391095 99 ntBASIC1.9□□□□□ -2.11
RUNDC3AQ59EK9 AL139156.1-201ENST00000412785 841 ntBASIC1.9□□□□□ -2.11
RUNDC3AQ59EK9 OOSP1P1-201ENST00000423265 274 ntBASIC1.9□□□□□ -2.11
RUNDC3AQ59EK9 AC024067.1-201ENST00000426199 223 ntBASIC1.9□□□□□ -2.11
RUNDC3AQ59EK9 HSPE1P9-201ENST00000440046 311 ntBASIC1.9□□□□□ -2.11
RUNDC3AQ59EK9 RPS29P21-201ENST00000496272 170 ntBASIC1.9□□□□□ -2.11
RUNDC3AQ59EK9 DEFB108E-201ENST00000524692 240 ntBASIC1.9□□□□□ -2.11
RUNDC3AQ59EK9 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.9□□□□□ -2.11
RUNDC3AQ59EK9 MIR5089-201ENST00000580047 84 ntBASIC1.9□□□□□ -2.11
RUNDC3AQ59EK9 AL590808.1-201ENST00000618696 141 ntBASIC1.9□□□□□ -2.11
RUNDC3AQ59EK9 AC064859.1-201ENST00000624741 174 ntBASIC1.9□□□□□ -2.11
RUNDC3AQ59EK9 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.9□□□□□ -2.11
RUNDC3AQ59EK9 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
RUNDC3AQ59EK9 Y_RNA.237-201ENST00000364439 102 ntBASIC1.89□□□□□ -2.11
RUNDC3AQ59EK9 Y_RNA.341-201ENST00000365341 102 ntBASIC1.89□□□□□ -2.11
RUNDC3AQ59EK9 Y_RNA.456-201ENST00000384232 111 ntBASIC1.89□□□□□ -2.11
RUNDC3AQ59EK9 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
RUNDC3AQ59EK9 SNORA53-201ENST00000391141 249 ntBASIC1.89□□□□□ -2.11
RUNDC3AQ59EK9 SNORA3.2-201ENST00000408221 125 ntBASIC1.89□□□□□ -2.11
RUNDC3AQ59EK9 MIR1302-6-201ENST00000408466 90 ntBASIC1.89□□□□□ -2.11
RUNDC3AQ59EK9 RNU2-7P-201ENST00000410794 178 ntBASIC1.89□□□□□ -2.11
RUNDC3AQ59EK9 AC245047.3-201ENST00000429428 127 ntBASIC1.89□□□□□ -2.11
RUNDC3AQ59EK9 RPL23AP6-201ENST00000446637 472 ntBASIC1.89□□□□□ -2.11
RUNDC3AQ59EK9 RNU7-94P-201ENST00000459576 63 ntBASIC1.89□□□□□ -2.11
RUNDC3AQ59EK9 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.89□□□□□ -2.11
RUNDC3AQ59EK9 RPL36AP21-201ENST00000490372 323 ntBASIC1.89□□□□□ -2.11
RUNDC3AQ59EK9 SERF1AP1-201ENST00000514575 187 ntBASIC1.89□□□□□ -2.11
RUNDC3AQ59EK9 SNORA31.10-201ENST00000516482 106 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms