Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 RNY1P4-201ENST00000384595 115 ntBASIC3.31□□□□□ -1.88
RSPO4Q2I0M5 RN7SKP111-201ENST00000410349 271 ntBASIC3.31□□□□□ -1.88
RSPO4Q2I0M5 RNU6-887P-201ENST00000410660 100 ntBASIC3.31□□□□□ -1.88
RSPO4Q2I0M5 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC3.31□□□□□ -1.88
RSPO4Q2I0M5 AL513477.1-202ENST00000417061 214 ntBASIC3.31□□□□□ -1.88
RSPO4Q2I0M5 RPS12P18-201ENST00000442381 270 ntBASIC3.31□□□□□ -1.88
RSPO4Q2I0M5 AC016717.1-201ENST00000448918 286 ntBASIC3.31□□□□□ -1.88
RSPO4Q2I0M5 AL441985.1-201ENST00000457727 251 ntBASIC3.31□□□□□ -1.88
RSPO4Q2I0M5 RNU1-131P-201ENST00000458943 161 ntBASIC3.31□□□□□ -1.88
RSPO4Q2I0M5 Y_RNA.705-201ENST00000516862 110 ntBASIC3.31□□□□□ -1.88
RSPO4Q2I0M5 RNU7-70P-201ENST00000516941 66 ntBASIC3.31□□□□□ -1.88
RSPO4Q2I0M5 SNORD19.2-201ENST00000516978 73 ntBASIC3.31□□□□□ -1.88
RSPO4Q2I0M5 AC091544.4-201ENST00000555268 342 ntBASIC3.31□□□□□ -1.88
RSPO4Q2I0M5 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.31□□□□□ -1.88
RSPO4Q2I0M5 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
RSPO4Q2I0M5 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RSPO4Q2I0M5 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
RSPO4Q2I0M5 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RSPO4Q2I0M5 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.31□□□□□ -1.88
RSPO4Q2I0M5 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RSPO4Q2I0M5 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.3□□□□□ -1.88
RSPO4Q2I0M5 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
RSPO4Q2I0M5 SNORD45B-201ENST00000364617 72 ntBASIC3.3□□□□□ -1.88
RSPO4Q2I0M5 Y_RNA.316-201ENST00000365118 111 ntBASIC3.3□□□□□ -1.88
RSPO4Q2I0M5 Y_RNA.410-201ENST00000383992 113 ntBASIC3.3□□□□□ -1.88
RSPO4Q2I0M5 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.3□□□□□ -1.88
RSPO4Q2I0M5 RNU7-14P-201ENST00000459331 62 ntBASIC3.3□□□□□ -1.88
RSPO4Q2I0M5 AC025445.1-201ENST00000502728 300 ntBASIC3.3□□□□□ -1.88
RSPO4Q2I0M5 RNU2-35P-201ENST00000516446 142 ntBASIC3.3□□□□□ -1.88
RSPO4Q2I0M5 RNU6-1006P-201ENST00000516998 103 ntBASIC3.3□□□□□ -1.88
RSPO4Q2I0M5 AC008507.4-201ENST00000585464 127 ntBASIC3.3□□□□□ -1.88
RSPO4Q2I0M5 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.3□□□□□ -1.88
RSPO4Q2I0M5 AC087741.2-201ENST00000619415 172 ntBASIC3.3□□□□□ -1.88
RSPO4Q2I0M5 MIR548BB-201ENST00000626714 66 ntBASIC3.3□□□□□ -1.88
RSPO4Q2I0M5 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.3□□□□□ -1.88
RSPO4Q2I0M5 AC010680.1-201ENST00000590024 3590 ntBASIC3.3□□□□□ -1.88
RSPO4Q2I0M5 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RSPO4Q2I0M5 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RSPO4Q2I0M5 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.29□□□□□ -1.88
RSPO4Q2I0M5 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RSPO4Q2I0M5 OTUD4P1-201ENST00000237841 3067 ntBASIC3.29□□□□□ -1.88
RSPO4Q2I0M5 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RSPO4Q2I0M5 RNU1-18P-201ENST00000363062 164 ntBASIC3.29□□□□□ -1.88
RSPO4Q2I0M5 RNU6-1229P-201ENST00000364295 107 ntBASIC3.29□□□□□ -1.88
RSPO4Q2I0M5 RNU6-1189P-201ENST00000383958 107 ntBASIC3.29□□□□□ -1.88
RSPO4Q2I0M5 RNU2-49P-201ENST00000410666 184 ntBASIC3.29□□□□□ -1.88
RSPO4Q2I0M5 RPL32P35-201ENST00000415214 394 ntBASIC3.29□□□□□ -1.88
RSPO4Q2I0M5 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC3.29□□□□□ -1.88
RSPO4Q2I0M5 AC010099.1-201ENST00000455434 375 ntBASIC3.29□□□□□ -1.88
RSPO4Q2I0M5 Y_RNA.659-201ENST00000515994 113 ntBASIC3.29□□□□□ -1.88
RSPO4Q2I0M5 MIR3683-201ENST00000580847 82 ntBASIC3.29□□□□□ -1.88
RSPO4Q2I0M5 MIR1255B1-201ENST00000636325 63 ntBASIC3.29□□□□□ -1.88
RSPO4Q2I0M5 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
RSPO4Q2I0M5 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RSPO4Q2I0M5 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.28□□□□□ -1.88
RSPO4Q2I0M5 AC010889.1-201ENST00000566193 2666 ntBASIC3.28□□□□□ -1.88
RSPO4Q2I0M5 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.28□□□□□ -1.88
RSPO4Q2I0M5 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RSPO4Q2I0M5 Y_RNA.95-201ENST00000363079 95 ntBASIC3.28□□□□□ -1.88
RSPO4Q2I0M5 Y_RNA.191-201ENST00000363972 113 ntBASIC3.28□□□□□ -1.88
RSPO4Q2I0M5 RNU6-409P-201ENST00000384114 104 ntBASIC3.28□□□□□ -1.88
RSPO4Q2I0M5 RNU1-57P-201ENST00000384491 166 ntBASIC3.28□□□□□ -1.88
RSPO4Q2I0M5 MIR605-201ENST00000385078 83 ntBASIC3.28□□□□□ -1.88
RSPO4Q2I0M5 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.28□□□□□ -1.88
RSPO4Q2I0M5 HMGN1P7-201ENST00000491722 313 ntBASIC3.28□□□□□ -1.88
RSPO4Q2I0M5 RPS29P21-201ENST00000496272 170 ntBASIC3.28□□□□□ -1.88
RSPO4Q2I0M5 RNU2-58P-201ENST00000516403 183 ntBASIC3.28□□□□□ -1.88
RSPO4Q2I0M5 RNU6-1231P-201ENST00000517185 103 ntBASIC3.28□□□□□ -1.88
RSPO4Q2I0M5 HMGN2P15-201ENST00000585707 270 ntBASIC3.28□□□□□ -1.88
RSPO4Q2I0M5 AC073413.2-201ENST00000604332 360 ntBASIC3.28□□□□□ -1.88
RSPO4Q2I0M5 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RSPO4Q2I0M5 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.28□□□□□ -1.88
RSPO4Q2I0M5 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
RSPO4Q2I0M5 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
RSPO4Q2I0M5 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.28□□□□□ -1.89
RSPO4Q2I0M5 TNPO1P3-201ENST00000436471 2662 ntBASIC3.27□□□□□ -1.89
RSPO4Q2I0M5 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.27□□□□□ -1.89
RSPO4Q2I0M5 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.27□□□□□ -1.89
RSPO4Q2I0M5 RNU6-661P-201ENST00000362409 107 ntBASIC3.27□□□□□ -1.89
RSPO4Q2I0M5 SNORD115-19-201ENST00000363098 82 ntBASIC3.27□□□□□ -1.89
RSPO4Q2I0M5 SNORD115-18-201ENST00000363293 82 ntBASIC3.27□□□□□ -1.89
RSPO4Q2I0M5 RNU6-509P-201ENST00000363519 107 ntBASIC3.27□□□□□ -1.89
RSPO4Q2I0M5 Y_RNA.242-201ENST00000364473 110 ntBASIC3.27□□□□□ -1.89
RSPO4Q2I0M5 RNU4-67P-201ENST00000364569 141 ntBASIC3.27□□□□□ -1.89
RSPO4Q2I0M5 SNORD115-17-201ENST00000364612 82 ntBASIC3.27□□□□□ -1.89
RSPO4Q2I0M5 RNU6-590P-201ENST00000365039 107 ntBASIC3.27□□□□□ -1.89
RSPO4Q2I0M5 Y_RNA.621-201ENST00000411065 96 ntBASIC3.27□□□□□ -1.89
RSPO4Q2I0M5 RN7SL863P-201ENST00000462370 296 ntBASIC3.27□□□□□ -1.89
RSPO4Q2I0M5 RNU6-1096P-201ENST00000517089 102 ntBASIC3.27□□□□□ -1.89
RSPO4Q2I0M5 MIR4438-201ENST00000585271 93 ntBASIC3.27□□□□□ -1.89
RSPO4Q2I0M5 MIR203B-201ENST00000636080 86 ntBASIC3.27□□□□□ -1.89
RSPO4Q2I0M5 AL356274.2-201ENST00000624379 3752 ntBASIC3.27□□□□□ -1.89
RSPO4Q2I0M5 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RSPO4Q2I0M5 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
RSPO4Q2I0M5 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
RSPO4Q2I0M5 RNU1-96P-201ENST00000364163 162 ntBASIC3.26□□□□□ -1.89
RSPO4Q2I0M5 Y_RNA.467-201ENST00000384297 102 ntBASIC3.26□□□□□ -1.89
RSPO4Q2I0M5 RNU4-69P-201ENST00000410677 143 ntBASIC3.26□□□□□ -1.89
RSPO4Q2I0M5 AC016909.1-201ENST00000415916 166 ntBASIC3.26□□□□□ -1.89
RSPO4Q2I0M5 Y_RNA.773-201ENST00000607168 90 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 212.2 ms