Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
YBX1P67809 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
YBX1P67809 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
YBX1P67809 AC093010.3-201ENST00000570269 15214 ntBASIC2.92□□□□□ -1.94
YBX1P67809 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.91□□□□□ -1.94
YBX1P67809 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.91□□□□□ -1.94
YBX1P67809 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
YBX1P67809 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
YBX1P67809 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
YBX1P67809 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
YBX1P67809 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
YBX1P67809 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
YBX1P67809 MIR422A-201ENST00000362286 90 ntBASIC2.91□□□□□ -1.94
YBX1P67809 Y_RNA.91-201ENST00000363042 107 ntBASIC2.91□□□□□ -1.94
YBX1P67809 Y_RNA.280-201ENST00000364765 112 ntBASIC2.91□□□□□ -1.94
YBX1P67809 Y_RNA.634-201ENST00000364811 113 ntBASIC2.91□□□□□ -1.94
YBX1P67809 RNU6-117P-201ENST00000365415 107 ntBASIC2.91□□□□□ -1.94
YBX1P67809 RNU6-147P-201ENST00000383983 107 ntBASIC2.91□□□□□ -1.94
YBX1P67809 MIR548A3-201ENST00000385297 97 ntBASIC2.91□□□□□ -1.94
YBX1P67809 SNORA48.8-201ENST00000391324 134 ntBASIC2.91□□□□□ -1.94
YBX1P67809 AC092185.1-201ENST00000491371 97 ntBASIC2.91□□□□□ -1.94
YBX1P67809 RNU6-586P-201ENST00000517265 104 ntBASIC2.91□□□□□ -1.94
YBX1P67809 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.91□□□□□ -1.94
YBX1P67809 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
YBX1P67809 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
YBX1P67809 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
YBX1P67809 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
YBX1P67809 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
YBX1P67809 SNORD116-21-201ENST00000384507 92 ntBASIC2.9□□□□□ -1.95
YBX1P67809 RNU6-1235P-201ENST00000384559 107 ntBASIC2.9□□□□□ -1.95
YBX1P67809 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.9□□□□□ -1.95
YBX1P67809 RPL30P4-201ENST00000429309 333 ntBASIC2.9□□□□□ -1.95
YBX1P67809 RPL39P40-201ENST00000445481 146 ntBASIC2.9□□□□□ -1.95
YBX1P67809 RNU6-498P-201ENST00000459468 107 ntBASIC2.9□□□□□ -1.95
YBX1P67809 SNORD77.4-201ENST00000516158 81 ntBASIC2.9□□□□□ -1.95
YBX1P67809 SCARNA17.1-201ENST00000516211 143 ntBASIC2.9□□□□□ -1.95
YBX1P67809 SCARNA17.2-201ENST00000516334 143 ntBASIC2.9□□□□□ -1.95
YBX1P67809 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.9□□□□□ -1.95
YBX1P67809 SCARNA17.4-201ENST00000614296 143 ntBASIC2.9□□□□□ -1.95
YBX1P67809 AL121890.5-201ENST00000620848 304 ntBASIC2.9□□□□□ -1.95
YBX1P67809 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
YBX1P67809 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
YBX1P67809 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
YBX1P67809 RNU6-647P-201ENST00000364243 107 ntBASIC2.89□□□□□ -1.95
YBX1P67809 SNORA71.1-201ENST00000364523 117 ntBASIC2.89□□□□□ -1.95
YBX1P67809 RNU6-309P-201ENST00000364573 106 ntBASIC2.89□□□□□ -1.95
YBX1P67809 AL603914.1-201ENST00000401964 204 ntBASIC2.89□□□□□ -1.95
YBX1P67809 AC016909.1-201ENST00000415916 166 ntBASIC2.89□□□□□ -1.95
YBX1P67809 AC063976.4-201ENST00000421971 163 ntBASIC2.89□□□□□ -1.95
YBX1P67809 TRIAP1P1-201ENST00000427062 225 ntBASIC2.89□□□□□ -1.95
YBX1P67809 AC244505.4-201ENST00000434905 287 ntBASIC2.89□□□□□ -1.95
YBX1P67809 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.89□□□□□ -1.95
YBX1P67809 SSXP5-201ENST00000443473 287 ntBASIC2.89□□□□□ -1.95
YBX1P67809 RPS4XP11-201ENST00000446897 772 ntBASIC2.89□□□□□ -1.95
YBX1P67809 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.89□□□□□ -1.95
YBX1P67809 RNU6-965P-201ENST00000516721 96 ntBASIC2.89□□□□□ -1.95
YBX1P67809 AC105245.1-201ENST00000581934 244 ntBASIC2.89□□□□□ -1.95
YBX1P67809 MIR3117-201ENST00000584034 78 ntBASIC2.89□□□□□ -1.95
YBX1P67809 Pinc.1-201ENST00000616452 154 ntBASIC2.89□□□□□ -1.95
YBX1P67809 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
YBX1P67809 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
YBX1P67809 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.88□□□□□ -1.95
YBX1P67809 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
YBX1P67809 MIR449A-201ENST00000362113 91 ntBASIC2.88□□□□□ -1.95
YBX1P67809 RNU6-508P-201ENST00000363231 103 ntBASIC2.88□□□□□ -1.95
YBX1P67809 RNU1-22P-201ENST00000363334 158 ntBASIC2.88□□□□□ -1.95
YBX1P67809 RNU6-1209P-201ENST00000363655 107 ntBASIC2.88□□□□□ -1.95
YBX1P67809 SNORD58C-201ENST00000365223 64 ntBASIC2.88□□□□□ -1.95
YBX1P67809 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
YBX1P67809 SNORA26-201ENST00000391286 122 ntBASIC2.88□□□□□ -1.95
YBX1P67809 AC107083.1-201ENST00000439643 279 ntBASIC2.88□□□□□ -1.95
YBX1P67809 AC245102.2-201ENST00000448956 180 ntBASIC2.88□□□□□ -1.95
YBX1P67809 HMGN2P18-201ENST00000450680 270 ntBASIC2.88□□□□□ -1.95
YBX1P67809 RPS29P21-201ENST00000496272 170 ntBASIC2.88□□□□□ -1.95
YBX1P67809 SNORA18.4-201ENST00000516440 124 ntBASIC2.88□□□□□ -1.95
YBX1P67809 RNU7-172P-201ENST00000517125 64 ntBASIC2.88□□□□□ -1.95
YBX1P67809 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
YBX1P67809 MIR4438-201ENST00000585271 93 ntBASIC2.88□□□□□ -1.95
YBX1P67809 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
YBX1P67809 AC009487.4-201ENST00000624969 3585 ntBASIC2.88□□□□□ -1.95
YBX1P67809 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
YBX1P67809 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
YBX1P67809 Y_RNA.35-201ENST00000362601 101 ntBASIC2.87□□□□□ -1.95
YBX1P67809 AL590004.2-201ENST00000404787 371 ntBASIC2.87□□□□□ -1.95
YBX1P67809 RPS26P45-201ENST00000471748 340 ntBASIC2.87□□□□□ -1.95
YBX1P67809 RNU6-237P-201ENST00000515985 71 ntBASIC2.87□□□□□ -1.95
YBX1P67809 RNU2-60P-201ENST00000517290 128 ntBASIC2.87□□□□□ -1.95
YBX1P67809 AC011604.1-201ENST00000545978 196 ntBASIC2.87□□□□□ -1.95
YBX1P67809 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.87□□□□□ -1.95
YBX1P67809 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.87□□□□□ -1.95
YBX1P67809 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.87□□□□□ -1.95
YBX1P67809 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
YBX1P67809 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.87□□□□□ -1.95
YBX1P67809 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.86□□□□□ -1.95
YBX1P67809 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.86□□□□□ -1.95
YBX1P67809 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
YBX1P67809 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.86□□□□□ -1.95
YBX1P67809 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
YBX1P67809 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
YBX1P67809 Y_RNA.796-201ENST00000364268 102 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms