Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 RNU6-1264P-201ENST00000383891 107 ntBASIC0.43□□□□□ -2.34
CLDN18P56856 Y_RNA.393-201ENST00000383936 102 ntBASIC0.43□□□□□ -2.34
CLDN18P56856 SNORA36.2-201ENST00000384004 127 ntBASIC0.43□□□□□ -2.34
CLDN18P56856 RNU6-281P-201ENST00000384212 103 ntBASIC0.43□□□□□ -2.34
CLDN18P56856 Y_RNA.533-201ENST00000384596 114 ntBASIC0.43□□□□□ -2.34
CLDN18P56856 MIR520C-201ENST00000385005 87 ntBASIC0.43□□□□□ -2.34
CLDN18P56856 MTCO3P40-201ENST00000392516 676 ntBASIC0.43□□□□□ -2.34
CLDN18P56856 RNA5SP222-201ENST00000411039 105 ntBASIC0.43□□□□□ -2.34
CLDN18P56856 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.43□□□□□ -2.34
CLDN18P56856 MTND3P23-201ENST00000431980 347 ntBASIC0.43□□□□□ -2.34
CLDN18P56856 AL137792.2-201ENST00000443484 235 ntBASIC0.43□□□□□ -2.34
CLDN18P56856 AL157398.1-201ENST00000452981 186 ntBASIC0.43□□□□□ -2.34
CLDN18P56856 HMGN2P26-201ENST00000463169 339 ntBASIC0.43□□□□□ -2.34
CLDN18P56856 RNU6-1110P-201ENST00000516462 101 ntBASIC0.43□□□□□ -2.34
CLDN18P56856 AC011195.1-201ENST00000578177 177 ntBASIC0.43□□□□□ -2.34
CLDN18P56856 MIR5696-201ENST00000578474 85 ntBASIC0.43□□□□□ -2.34
CLDN18P56856 DISC2.1-201ENST00000612827 205 ntBASIC0.43□□□□□ -2.34
CLDN18P56856 AL008636.1-201ENST00000625038 1018 ntBASIC0.43□□□□□ -2.34
CLDN18P56856 AC027279.3-201ENST00000625055 122 ntBASIC0.43□□□□□ -2.34
CLDN18P56856 AC068137.3-201ENST00000639191 341 ntBASIC0.43□□□□□ -2.34
CLDN18P56856 RNU6-1297P-201ENST00000384415 104 ntBASIC0.42□□□□□ -2.34
CLDN18P56856 RNU6-306P-201ENST00000384617 107 ntBASIC0.42□□□□□ -2.34
CLDN18P56856 RNU6-1067P-201ENST00000384752 107 ntBASIC0.42□□□□□ -2.34
CLDN18P56856 RNU1-119P-201ENST00000391122 165 ntBASIC0.42□□□□□ -2.34
CLDN18P56856 AC243428.1-201ENST00000421099 264 ntBASIC0.42□□□□□ -2.34
CLDN18P56856 AC114737.2-201ENST00000421583 173 ntBASIC0.42□□□□□ -2.34
CLDN18P56856 PCNPP5-201ENST00000452246 481 ntBASIC0.42□□□□□ -2.34
CLDN18P56856 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.42□□□□□ -2.34
CLDN18P56856 AC114811.1-201ENST00000507207 168 ntBASIC0.42□□□□□ -2.34
CLDN18P56856 RNU6-496P-201ENST00000516145 99 ntBASIC0.42□□□□□ -2.34
CLDN18P56856 Y_RNA.665-201ENST00000516177 98 ntBASIC0.42□□□□□ -2.34
CLDN18P56856 RNU6-256P-201ENST00000516747 97 ntBASIC0.42□□□□□ -2.34
CLDN18P56856 AL358944.1-201ENST00000528537 144 ntBASIC0.42□□□□□ -2.34
CLDN18P56856 AC023442.1-201ENST00000531247 422 ntBASIC0.42□□□□□ -2.34
CLDN18P56856 AC100812.1-201ENST00000607622 580 ntBASIC0.42□□□□□ -2.34
CLDN18P56856 AC243829.3-201ENST00000622177 108 ntBASIC0.42□□□□□ -2.34
CLDN18P56856 AL589743.1-201ENST00000551932 2712 ntBASIC0.42□□□□□ -2.34
CLDN18P56856 RNU6-222P-201ENST00000362438 107 ntBASIC0.41□□□□□ -2.34
CLDN18P56856 Y_RNA.498-201ENST00000384460 102 ntBASIC0.41□□□□□ -2.34
CLDN18P56856 Y_RNA.530-201ENST00000384587 101 ntBASIC0.41□□□□□ -2.34
CLDN18P56856 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.41□□□□□ -2.34
CLDN18P56856 Y_RNA.670-201ENST00000516255 105 ntBASIC0.41□□□□□ -2.34
CLDN18P56856 Y_RNA.693-201ENST00000516641 110 ntBASIC0.41□□□□□ -2.34
CLDN18P56856 AC090617.3-201ENST00000573670 475 ntBASIC0.41□□□□□ -2.34
CLDN18P56856 MIR4300-201ENST00000581016 96 ntBASIC0.41□□□□□ -2.34
CLDN18P56856 RNU6-94P-201ENST00000607728 107 ntBASIC0.41□□□□□ -2.34
CLDN18P56856 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.41□□□□□ -2.34
CLDN18P56856 SNORD114-23-201ENST00000363536 72 ntBASIC0.4□□□□□ -2.35
CLDN18P56856 MIR516B2-201ENST00000385190 85 ntBASIC0.4□□□□□ -2.35
CLDN18P56856 MIR1298-201ENST00000408783 112 ntBASIC0.4□□□□□ -2.35
CLDN18P56856 RNU5A-5P-201ENST00000411054 116 ntBASIC0.4□□□□□ -2.35
CLDN18P56856 RNU6-1001P-201ENST00000411265 100 ntBASIC0.4□□□□□ -2.35
CLDN18P56856 RNU6-1281P-201ENST00000516223 105 ntBASIC0.4□□□□□ -2.35
CLDN18P56856 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.4□□□□□ -2.35
CLDN18P56856 OSBPL9P5-201ENST00000542581 171 ntBASIC0.4□□□□□ -2.35
CLDN18P56856 AL162413.1-201ENST00000603198 110 ntBASIC0.4□□□□□ -2.35
CLDN18P56856 ZNF299P-201ENST00000406845 1804 ntBASIC0.4□□□□□ -2.35
CLDN18P56856 MTND5P26-201ENST00000426018 1752 ntBASIC0.4□□□□□ -2.35
CLDN18P56856 MTND5P16-201ENST00000460269 1703 ntBASIC0.39□□□□□ -2.35
CLDN18P56856 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.39□□□□□ -2.35
CLDN18P56856 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
CLDN18P56856 SNORD14.1-201ENST00000365609 90 ntBASIC0.39□□□□□ -2.35
CLDN18P56856 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
CLDN18P56856 RNU6-1237P-201ENST00000384777 107 ntBASIC0.39□□□□□ -2.35
CLDN18P56856 DEFB108C-201ENST00000400154 252 ntBASIC0.39□□□□□ -2.35
CLDN18P56856 MIR873-201ENST00000401120 77 ntBASIC0.39□□□□□ -2.35
CLDN18P56856 RNA5SP475-201ENST00000410568 110 ntBASIC0.39□□□□□ -2.35
CLDN18P56856 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.39□□□□□ -2.35
CLDN18P56856 AC093027.1-201ENST00000546698 429 ntBASIC0.39□□□□□ -2.35
CLDN18P56856 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.39□□□□□ -2.35
CLDN18P56856 AC124864.2-201ENST00000624736 186 ntBASIC0.39□□□□□ -2.35
CLDN18P56856 Y_RNA.106-201ENST00000363189 100 ntBASIC0.38□□□□□ -2.35
CLDN18P56856 SNORA50A-201ENST00000384225 134 ntBASIC0.38□□□□□ -2.35
CLDN18P56856 RNY1P4-201ENST00000384595 115 ntBASIC0.38□□□□□ -2.35
CLDN18P56856 MIR136-201ENST00000385207 82 ntBASIC0.38□□□□□ -2.35
CLDN18P56856 SNORD111-201ENST00000408139 94 ntBASIC0.38□□□□□ -2.35
CLDN18P56856 MIR1185-1-201ENST00000408598 86 ntBASIC0.38□□□□□ -2.35
CLDN18P56856 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.38□□□□□ -2.35
CLDN18P56856 RNU6-63P-201ENST00000516690 95 ntBASIC0.38□□□□□ -2.35
CLDN18P56856 MTND4LP26-201ENST00000518144 282 ntBASIC0.38□□□□□ -2.35
CLDN18P56856 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.38□□□□□ -2.35
CLDN18P56856 MIR3672-201ENST00000584290 82 ntBASIC0.38□□□□□ -2.35
CLDN18P56856 MIR3611-201ENST00000584484 83 ntBASIC0.38□□□□□ -2.35
CLDN18P56856 RN7SKP299-201ENST00000606679 301 ntBASIC0.38□□□□□ -2.35
CLDN18P56856 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.37□□□□□ -2.35
CLDN18P56856 Y_RNA.77-201ENST00000362962 107 ntBASIC0.37□□□□□ -2.35
CLDN18P56856 Y_RNA.212-201ENST00000364177 102 ntBASIC0.37□□□□□ -2.35
CLDN18P56856 Y_RNA.490-201ENST00000384413 102 ntBASIC0.37□□□□□ -2.35
CLDN18P56856 MTCYBP10-201ENST00000424905 650 ntBASIC0.37□□□□□ -2.35
CLDN18P56856 RNU7-87P-201ENST00000459343 62 ntBASIC0.37□□□□□ -2.35
CLDN18P56856 RNU7-41P-201ENST00000515917 61 ntBASIC0.37□□□□□ -2.35
CLDN18P56856 SNORA18.7-201ENST00000516910 131 ntBASIC0.37□□□□□ -2.35
CLDN18P56856 SNORA74.3-201ENST00000517108 154 ntBASIC0.37□□□□□ -2.35
CLDN18P56856 AC063944.3-201ENST00000609969 533 ntBASIC0.37□□□□□ -2.35
CLDN18P56856 AC243829.6-201ENST00000612652 106 ntBASIC0.37□□□□□ -2.35
CLDN18P56856 AC104260.1-201ENST00000616660 539 ntBASIC0.37□□□□□ -2.35
CLDN18P56856 AL359880.1-201ENST00000621879 266 ntBASIC0.37□□□□□ -2.35
CLDN18P56856 U6.115-201ENST00000636045 103 ntBASIC0.37□□□□□ -2.35
CLDN18P56856 AC010487.4-201ENST00000637027 61 ntBASIC0.37□□□□□ -2.35
CLDN18P56856 RNU6-595P-201ENST00000363944 107 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms