Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 RNU6-228P-201ENST00000362700 106 ntBASIC3.44□□□□□ -1.86
RNF144AP50876 Y_RNA.440-201ENST00000384120 114 ntBASIC3.44□□□□□ -1.86
RNF144AP50876 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
RNF144AP50876 Y_RNA.601-201ENST00000410500 113 ntBASIC3.44□□□□□ -1.86
RNF144AP50876 AL445687.1-201ENST00000439946 251 ntBASIC3.44□□□□□ -1.86
RNF144AP50876 RNU7-80P-201ENST00000459562 61 ntBASIC3.44□□□□□ -1.86
RNF144AP50876 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.44□□□□□ -1.86
RNF144AP50876 AP002004.2-201ENST00000531656 154 ntBASIC3.44□□□□□ -1.86
RNF144AP50876 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
RNF144AP50876 MIR5685-201ENST00000579080 79 ntBASIC3.44□□□□□ -1.86
RNF144AP50876 IGLL4P-201ENST00000614590 133 ntBASIC3.44□□□□□ -1.86
RNF144AP50876 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
RNF144AP50876 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RNF144AP50876 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
RNF144AP50876 RNU6-268P-201ENST00000364174 107 ntBASIC3.43□□□□□ -1.86
RNF144AP50876 RNY1P1-201ENST00000364372 112 ntBASIC3.43□□□□□ -1.86
RNF144AP50876 Y_RNA.290-201ENST00000364879 114 ntBASIC3.43□□□□□ -1.86
RNF144AP50876 RNA5SP323-201ENST00000391094 133 ntBASIC3.43□□□□□ -1.86
RNF144AP50876 FO393413.1-201ENST00000402892 195 ntBASIC3.43□□□□□ -1.86
RNF144AP50876 RNA5SP225-201ENST00000410874 135 ntBASIC3.43□□□□□ -1.86
RNF144AP50876 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.43□□□□□ -1.86
RNF144AP50876 RNU2-35P-201ENST00000516446 142 ntBASIC3.43□□□□□ -1.86
RNF144AP50876 SCARNA3-201ENST00000517097 143 ntBASIC3.43□□□□□ -1.86
RNF144AP50876 MIR3683-201ENST00000580847 82 ntBASIC3.43□□□□□ -1.86
RNF144AP50876 MIR3199-1-201ENST00000582434 88 ntBASIC3.43□□□□□ -1.86
RNF144AP50876 FAM71BP1-201ENST00000604431 523 ntBASIC3.43□□□□□ -1.86
RNF144AP50876 AC110079.1-202ENST00000635213 138 ntBASIC3.43□□□□□ -1.86
RNF144AP50876 MIR338-201ENST00000636369 67 ntBASIC3.43□□□□□ -1.86
RNF144AP50876 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RNF144AP50876 Y_RNA.10-201ENST00000362371 110 ntBASIC3.42□□□□□ -1.86
RNF144AP50876 RNU6-1099P-201ENST00000363533 107 ntBASIC3.42□□□□□ -1.86
RNF144AP50876 Y_RNA.507-201ENST00000384500 99 ntBASIC3.42□□□□□ -1.86
RNF144AP50876 Y_RNA.531-201ENST00000384589 121 ntBASIC3.42□□□□□ -1.86
RNF144AP50876 RNU6-1328P-201ENST00000410938 106 ntBASIC3.42□□□□□ -1.86
RNF144AP50876 MICF-203ENST00000432679 129 ntBASIC3.42□□□□□ -1.86
RNF144AP50876 AP003484.1-201ENST00000530974 250 ntBASIC3.42□□□□□ -1.86
RNF144AP50876 U6.108-201ENST00000637764 58 ntBASIC3.42□□□□□ -1.86
RNF144AP50876 GABRG2-229ENST00000641017 3628 ntBASIC3.42□□□□□ -1.86
RNF144AP50876 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.42□□□□□ -1.86
RNF144AP50876 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.42□□□□□ -1.86
RNF144AP50876 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RNF144AP50876 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
RNF144AP50876 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
RNF144AP50876 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.41□□□□□ -1.86
RNF144AP50876 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.41□□□□□ -1.86
RNF144AP50876 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RNF144AP50876 MAPK10-362ENST00000641864 4484 ntBASIC3.41□□□□□ -1.86
RNF144AP50876 RNU1-23P-201ENST00000363361 144 ntBASIC3.41□□□□□ -1.86
RNF144AP50876 snoU2-30.1-201ENST00000365012 70 ntBASIC3.41□□□□□ -1.86
RNF144AP50876 Y_RNA.454-201ENST00000384224 113 ntBASIC3.41□□□□□ -1.86
RNF144AP50876 U8.11-201ENST00000384699 133 ntBASIC3.41□□□□□ -1.86
RNF144AP50876 SNORA3.3-201ENST00000408712 125 ntBASIC3.41□□□□□ -1.86
RNF144AP50876 AC107083.1-201ENST00000439643 279 ntBASIC3.41□□□□□ -1.86
RNF144AP50876 AL357552.1-201ENST00000445254 415 ntBASIC3.41□□□□□ -1.86
RNF144AP50876 CYP2C59P-201ENST00000457790 269 ntBASIC3.41□□□□□ -1.86
RNF144AP50876 U8.18-201ENST00000459285 133 ntBASIC3.41□□□□□ -1.86
RNF144AP50876 RNA5SP57-201ENST00000459463 123 ntBASIC3.41□□□□□ -1.86
RNF144AP50876 AC022137.1-201ENST00000483735 151 ntBASIC3.41□□□□□ -1.86
RNF144AP50876 RNU7-61P-201ENST00000515897 61 ntBASIC3.41□□□□□ -1.86
RNF144AP50876 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.41□□□□□ -1.86
RNF144AP50876 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.41□□□□□ -1.86
RNF144AP50876 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.41□□□□□ -1.86
RNF144AP50876 MIR4738-201ENST00000579134 87 ntBASIC3.41□□□□□ -1.86
RNF144AP50876 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.41□□□□□ -1.86
RNF144AP50876 HSPE1P19-201ENST00000603327 295 ntBASIC3.41□□□□□ -1.86
RNF144AP50876 RNVU1-4-201ENST00000612985 164 ntBASIC3.41□□□□□ -1.86
RNF144AP50876 MIR7157-201ENST00000635801 60 ntBASIC3.41□□□□□ -1.86
RNF144AP50876 MIR3202-2-201ENST00000635980 79 ntBASIC3.41□□□□□ -1.86
RNF144AP50876 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
RNF144AP50876 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.4□□□□□ -1.86
RNF144AP50876 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.86
RNF144AP50876 SNORA33-201ENST00000363664 130 ntBASIC3.4□□□□□ -1.87
RNF144AP50876 SNORA14A-201ENST00000364773 135 ntBASIC3.4□□□□□ -1.87
RNF144AP50876 SNORA8-201ENST00000384574 139 ntBASIC3.4□□□□□ -1.87
RNF144AP50876 RNA5SP424-201ENST00000390988 115 ntBASIC3.4□□□□□ -1.87
RNF144AP50876 MIR1255A-201ENST00000408338 113 ntBASIC3.4□□□□□ -1.87
RNF144AP50876 RNU6-938P-201ENST00000411285 103 ntBASIC3.4□□□□□ -1.87
RNF144AP50876 RPS29P31-201ENST00000446147 164 ntBASIC3.4□□□□□ -1.87
RNF144AP50876 RPL39P39-201ENST00000455840 151 ntBASIC3.4□□□□□ -1.87
RNF144AP50876 RNU7-94P-201ENST00000459576 63 ntBASIC3.4□□□□□ -1.87
RNF144AP50876 RNU2-13P-201ENST00000515909 113 ntBASIC3.4□□□□□ -1.87
RNF144AP50876 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.4□□□□□ -1.87
RNF144AP50876 CYCSP30-201ENST00000546447 172 ntBASIC3.4□□□□□ -1.87
RNF144AP50876 AC022254.1-201ENST00000567857 235 ntBASIC3.4□□□□□ -1.87
RNF144AP50876 MIR4425-201ENST00000580572 84 ntBASIC3.4□□□□□ -1.87
RNF144AP50876 AC091932.4-201ENST00000623386 200 ntBASIC3.4□□□□□ -1.87
RNF144AP50876 MIR7515-201ENST00000637837 67 ntBASIC3.4□□□□□ -1.87
RNF144AP50876 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RNF144AP50876 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.39□□□□□ -1.87
RNF144AP50876 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
RNF144AP50876 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
RNF144AP50876 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
RNF144AP50876 MIR342-201ENST00000362212 99 ntBASIC3.39□□□□□ -1.87
RNF144AP50876 RNU4-16P-201ENST00000364737 141 ntBASIC3.39□□□□□ -1.87
RNF144AP50876 RPL21P3-201ENST00000395517 478 ntBASIC3.39□□□□□ -1.87
RNF144AP50876 SNORA57.3-201ENST00000411095 141 ntBASIC3.39□□□□□ -1.87
RNF144AP50876 AC113410.1-201ENST00000505029 247 ntBASIC3.39□□□□□ -1.87
RNF144AP50876 SNORA70.18-201ENST00000516696 98 ntBASIC3.39□□□□□ -1.87
RNF144AP50876 RNU6-711P-201ENST00000517255 106 ntBASIC3.39□□□□□ -1.87
RNF144AP50876 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms