Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.98□□□□□ -1.93
CCNFP41002 RPS27P1-201ENST00000450552 247 ntBASIC2.98□□□□□ -1.93
CCNFP41002 RNU6-1096P-201ENST00000517089 102 ntBASIC2.98□□□□□ -1.93
CCNFP41002 NDUFA5P6-201ENST00000542110 379 ntBASIC2.98□□□□□ -1.93
CCNFP41002 AC112693.2-201ENST00000556538 232 ntBASIC2.98□□□□□ -1.93
CCNFP41002 LARP7P3-201ENST00000579888 337 ntBASIC2.98□□□□□ -1.93
CCNFP41002 U6.73-201ENST00000619194 103 ntBASIC2.98□□□□□ -1.93
CCNFP41002 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.98□□□□□ -1.93
CCNFP41002 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CCNFP41002 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CCNFP41002 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.98□□□□□ -1.93
CCNFP41002 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CCNFP41002 Y_RNA.203-201ENST00000364106 102 ntBASIC2.97□□□□□ -1.93
CCNFP41002 RNU6-959P-201ENST00000384671 107 ntBASIC2.97□□□□□ -1.93
CCNFP41002 RNU6-768P-201ENST00000384683 107 ntBASIC2.97□□□□□ -1.93
CCNFP41002 SNORA40-201ENST00000388090 126 ntBASIC2.97□□□□□ -1.93
CCNFP41002 SRIP3-201ENST00000413200 219 ntBASIC2.97□□□□□ -1.93
CCNFP41002 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.97□□□□□ -1.93
CCNFP41002 RPS15AP28-201ENST00000435088 386 ntBASIC2.97□□□□□ -1.93
CCNFP41002 SNRPGP8-201ENST00000454064 226 ntBASIC2.97□□□□□ -1.93
CCNFP41002 AC023449.1-201ENST00000454464 154 ntBASIC2.97□□□□□ -1.93
CCNFP41002 AC233266.1-201ENST00000454518 96 ntBASIC2.97□□□□□ -1.93
CCNFP41002 AC093732.2-201ENST00000607950 274 ntBASIC2.97□□□□□ -1.93
CCNFP41002 AC242852.1-201ENST00000612151 96 ntBASIC2.97□□□□□ -1.93
CCNFP41002 AC244015.1-201ENST00000622301 99 ntBASIC2.97□□□□□ -1.93
CCNFP41002 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
CCNFP41002 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.97□□□□□ -1.93
CCNFP41002 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.96□□□□□ -1.93
CCNFP41002 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.93
CCNFP41002 snoU2-30.2-201ENST00000362805 70 ntBASIC2.96□□□□□ -1.94
CCNFP41002 SNORA71.1-201ENST00000364523 117 ntBASIC2.96□□□□□ -1.94
CCNFP41002 Y_RNA.500-201ENST00000384466 111 ntBASIC2.96□□□□□ -1.94
CCNFP41002 RNA5SP467-201ENST00000391274 118 ntBASIC2.96□□□□□ -1.94
CCNFP41002 RN7SKP101-201ENST00000411376 320 ntBASIC2.96□□□□□ -1.94
CCNFP41002 EDDM3CP-201ENST00000415977 425 ntBASIC2.96□□□□□ -1.94
CCNFP41002 RNU6-62P-201ENST00000516526 102 ntBASIC2.96□□□□□ -1.94
CCNFP41002 AC107016.2-201ENST00000547968 190 ntBASIC2.96□□□□□ -1.94
CCNFP41002 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.96□□□□□ -1.94
CCNFP41002 MIR8057-201ENST00000620957 69 ntBASIC2.96□□□□□ -1.94
CCNFP41002 AC012640.5-201ENST00000623897 319 ntBASIC2.96□□□□□ -1.94
CCNFP41002 RNA5SP374-201ENST00000362939 125 ntBASIC2.95□□□□□ -1.94
CCNFP41002 SNORA54-201ENST00000384281 123 ntBASIC2.95□□□□□ -1.94
CCNFP41002 RNU6-1072P-201ENST00000384703 107 ntBASIC2.95□□□□□ -1.94
CCNFP41002 RNU6-443P-201ENST00000384780 107 ntBASIC2.95□□□□□ -1.94
CCNFP41002 RNU6-588P-201ENST00000410281 105 ntBASIC2.95□□□□□ -1.94
CCNFP41002 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.95□□□□□ -1.94
CCNFP41002 AC008885.1-201ENST00000514930 301 ntBASIC2.95□□□□□ -1.94
CCNFP41002 MIR2681-201ENST00000581814 105 ntBASIC2.95□□□□□ -1.94
CCNFP41002 AC007229.1-201ENST00000590455 412 ntBASIC2.95□□□□□ -1.94
CCNFP41002 JPX_2.1-201ENST00000614161 69 ntBASIC2.95□□□□□ -1.94
CCNFP41002 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CCNFP41002 MIR422A-201ENST00000362286 90 ntBASIC2.94□□□□□ -1.94
CCNFP41002 Y_RNA.432-201ENST00000384087 111 ntBASIC2.94□□□□□ -1.94
CCNFP41002 RNU6-22P-201ENST00000384355 107 ntBASIC2.94□□□□□ -1.94
CCNFP41002 RNA5SP323-201ENST00000391094 133 ntBASIC2.94□□□□□ -1.94
CCNFP41002 SNORD88.1-201ENST00000408684 91 ntBASIC2.94□□□□□ -1.94
CCNFP41002 RPPH1-2P-201ENST00000516688 293 ntBASIC2.94□□□□□ -1.94
CCNFP41002 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
CCNFP41002 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CCNFP41002 SNORD115-3-201ENST00000363100 82 ntBASIC2.93□□□□□ -1.94
CCNFP41002 SNORD114-6-201ENST00000364393 72 ntBASIC2.93□□□□□ -1.94
CCNFP41002 Y_RNA.267-201ENST00000364679 109 ntBASIC2.93□□□□□ -1.94
CCNFP41002 Y_RNA.393-201ENST00000383936 102 ntBASIC2.93□□□□□ -1.94
CCNFP41002 Y_RNA.420-201ENST00000384043 110 ntBASIC2.93□□□□□ -1.94
CCNFP41002 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.93□□□□□ -1.94
CCNFP41002 RNU7-26P-201ENST00000458980 63 ntBASIC2.93□□□□□ -1.94
CCNFP41002 RNU6-1211P-201ENST00000459179 105 ntBASIC2.93□□□□□ -1.94
CCNFP41002 RNU6-1299P-201ENST00000516316 100 ntBASIC2.93□□□□□ -1.94
CCNFP41002 RNU6-1291P-201ENST00000516591 104 ntBASIC2.93□□□□□ -1.94
CCNFP41002 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.93□□□□□ -1.94
CCNFP41002 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.93□□□□□ -1.94
CCNFP41002 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
CCNFP41002 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CCNFP41002 Y_RNA.99-201ENST00000363138 105 ntBASIC2.92□□□□□ -1.94
CCNFP41002 RNU6-1209P-201ENST00000363655 107 ntBASIC2.92□□□□□ -1.94
CCNFP41002 SNORA38-201ENST00000363946 132 ntBASIC2.92□□□□□ -1.94
CCNFP41002 MIR520G-201ENST00000385064 90 ntBASIC2.92□□□□□ -1.94
CCNFP41002 SNORA48.2-201ENST00000390926 124 ntBASIC2.92□□□□□ -1.94
CCNFP41002 RNU6-1154P-201ENST00000391001 104 ntBASIC2.92□□□□□ -1.94
CCNFP41002 RNU6-460P-201ENST00000391158 108 ntBASIC2.92□□□□□ -1.94
CCNFP41002 RNU4-43P-201ENST00000410628 137 ntBASIC2.92□□□□□ -1.94
CCNFP41002 RNU2-51P-201ENST00000410708 197 ntBASIC2.92□□□□□ -1.94
CCNFP41002 RNU2-70P-201ENST00000410718 179 ntBASIC2.92□□□□□ -1.94
CCNFP41002 MTND4LP9-201ENST00000427694 174 ntBASIC2.92□□□□□ -1.94
CCNFP41002 AC245102.2-201ENST00000448956 180 ntBASIC2.92□□□□□ -1.94
CCNFP41002 YWHAEP4-201ENST00000505390 198 ntBASIC2.92□□□□□ -1.94
CCNFP41002 RNU7-99P-201ENST00000516271 62 ntBASIC2.92□□□□□ -1.94
CCNFP41002 RNU6-971P-201ENST00000516920 106 ntBASIC2.92□□□□□ -1.94
CCNFP41002 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.92□□□□□ -1.94
CCNFP41002 MIR378D2-201ENST00000580636 98 ntBASIC2.92□□□□□ -1.94
CCNFP41002 MIR4325-201ENST00000583049 90 ntBASIC2.92□□□□□ -1.94
CCNFP41002 AL359075.3-201ENST00000613288 217 ntBASIC2.92□□□□□ -1.94
CCNFP41002 uc_338.4-201ENST00000616635 176 ntBASIC2.92□□□□□ -1.94
CCNFP41002 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
CCNFP41002 AL161431.1-201ENST00000618966 4205 ntBASIC2.92□□□□□ -1.94
CCNFP41002 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CCNFP41002 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CCNFP41002 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CCNFP41002 RNU6-851P-201ENST00000384565 107 ntBASIC2.91□□□□□ -1.94
CCNFP41002 RNU6-160P-201ENST00000384591 107 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms