Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
COL15A1P39059 Y_RNA.16-201ENST00000362421 102 ntBASIC2.34□□□□□ -2.04
COL15A1P39059 RNA5SP138-201ENST00000365098 114 ntBASIC2.34□□□□□ -2.04
COL15A1P39059 RNU6-514P-201ENST00000384208 107 ntBASIC2.34□□□□□ -2.04
COL15A1P39059 RNU1-148P-201ENST00000384472 162 ntBASIC2.34□□□□□ -2.04
COL15A1P39059 MIR1253-201ENST00000408273 105 ntBASIC2.34□□□□□ -2.04
COL15A1P39059 U3.40-201ENST00000408706 208 ntBASIC2.34□□□□□ -2.04
COL15A1P39059 Y_RNA.618-201ENST00000410949 107 ntBASIC2.34□□□□□ -2.04
COL15A1P39059 AC024067.1-201ENST00000426199 223 ntBASIC2.34□□□□□ -2.04
COL15A1P39059 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.34□□□□□ -2.04
COL15A1P39059 RNU1-40P-201ENST00000516816 164 ntBASIC2.34□□□□□ -2.04
COL15A1P39059 RNU1-97P-201ENST00000516872 164 ntBASIC2.34□□□□□ -2.04
COL15A1P39059 RNU2-31P-201ENST00000516954 155 ntBASIC2.34□□□□□ -2.04
COL15A1P39059 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.34□□□□□ -2.04
COL15A1P39059 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.34□□□□□ -2.04
COL15A1P39059 AC002984.1-201ENST00000591692 448 ntBASIC2.34□□□□□ -2.04
COL15A1P39059 MIR8081-201ENST00000611533 95 ntBASIC2.34□□□□□ -2.04
COL15A1P39059 SDR42E1P4-201ENST00000620894 481 ntBASIC2.34□□□□□ -2.04
COL15A1P39059 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.33□□□□□ -2.04
COL15A1P39059 SNORA25.1-201ENST00000362326 128 ntBASIC2.33□□□□□ -2.04
COL15A1P39059 Y_RNA.237-201ENST00000364439 102 ntBASIC2.33□□□□□ -2.04
COL15A1P39059 RNU6-1240P-201ENST00000365155 104 ntBASIC2.33□□□□□ -2.04
COL15A1P39059 Y_RNA.374-201ENST00000365606 101 ntBASIC2.33□□□□□ -2.04
COL15A1P39059 MIR613-201ENST00000385248 95 ntBASIC2.33□□□□□ -2.04
COL15A1P39059 RNU2-38P-201ENST00000410856 79 ntBASIC2.33□□□□□ -2.04
COL15A1P39059 RNU6-1199P-201ENST00000411249 104 ntBASIC2.33□□□□□ -2.04
COL15A1P39059 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
COL15A1P39059 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.33□□□□□ -2.04
COL15A1P39059 MTND4LP30-201ENST00000454092 297 ntBASIC2.33□□□□□ -2.04
COL15A1P39059 SNORD127-201ENST00000458892 86 ntBASIC2.33□□□□□ -2.04
COL15A1P39059 RNU6-1132P-201ENST00000459214 107 ntBASIC2.33□□□□□ -2.04
COL15A1P39059 Y_RNA.668-201ENST00000516233 93 ntBASIC2.33□□□□□ -2.04
COL15A1P39059 RNU6-966P-201ENST00000516479 104 ntBASIC2.33□□□□□ -2.04
COL15A1P39059 AC025647.1-201ENST00000517879 253 ntBASIC2.33□□□□□ -2.04
COL15A1P39059 AC027419.1-201ENST00000522976 328 ntBASIC2.33□□□□□ -2.04
COL15A1P39059 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.33□□□□□ -2.04
COL15A1P39059 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.33□□□□□ -2.04
COL15A1P39059 AL031274.2-201ENST00000599419 203 ntBASIC2.33□□□□□ -2.04
COL15A1P39059 MIR6895-201ENST00000613497 78 ntBASIC2.33□□□□□ -2.04
COL15A1P39059 AC022202.1-201ENST00000613515 211 ntBASIC2.33□□□□□ -2.04
COL15A1P39059 AP001282.2-201ENST00000616149 309 ntBASIC2.33□□□□□ -2.04
COL15A1P39059 U6.115-201ENST00000636045 103 ntBASIC2.33□□□□□ -2.04
COL15A1P39059 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
COL15A1P39059 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
COL15A1P39059 AL159152.1-201ENST00000635019 2587 ntBASIC2.32□□□□□ -2.04
COL15A1P39059 SNORD114-26-201ENST00000363543 72 ntBASIC2.32□□□□□ -2.04
COL15A1P39059 Y_RNA.243-201ENST00000364481 109 ntBASIC2.32□□□□□ -2.04
COL15A1P39059 Y_RNA.329-201ENST00000365209 107 ntBASIC2.32□□□□□ -2.04
COL15A1P39059 SNORA6-201ENST00000384033 151 ntBASIC2.32□□□□□ -2.04
COL15A1P39059 AL031003.1-201ENST00000404229 172 ntBASIC2.32□□□□□ -2.04
COL15A1P39059 BTF3P4-201ENST00000418852 495 ntBASIC2.32□□□□□ -2.04
COL15A1P39059 MRPS10P1-201ENST00000448483 130 ntBASIC2.32□□□□□ -2.04
COL15A1P39059 SUMO1P2-201ENST00000452524 304 ntBASIC2.32□□□□□ -2.04
COL15A1P39059 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.32□□□□□ -2.04
COL15A1P39059 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.32□□□□□ -2.04
COL15A1P39059 AC009127.3-201ENST00000570531 403 ntBASIC2.32□□□□□ -2.04
COL15A1P39059 AC006006.1-201ENST00000603082 144 ntBASIC2.32□□□□□ -2.04
COL15A1P39059 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.32□□□□□ -2.04
COL15A1P39059 AC012640.5-201ENST00000623897 319 ntBASIC2.32□□□□□ -2.04
COL15A1P39059 SNORD115-30-201ENST00000364117 82 ntBASIC2.31□□□□□ -2.04
COL15A1P39059 RNU6-326P-201ENST00000365480 107 ntBASIC2.31□□□□□ -2.04
COL15A1P39059 SNORD23.1-201ENST00000408212 104 ntBASIC2.31□□□□□ -2.04
COL15A1P39059 RNU4-62P-201ENST00000410125 130 ntBASIC2.31□□□□□ -2.04
COL15A1P39059 RPL39P38-201ENST00000467018 153 ntBASIC2.31□□□□□ -2.04
COL15A1P39059 SNORA70.12-201ENST00000516084 153 ntBASIC2.31□□□□□ -2.04
COL15A1P39059 RNU6-856P-201ENST00000516959 98 ntBASIC2.31□□□□□ -2.04
COL15A1P39059 MIR3145-201ENST00000580727 82 ntBASIC2.31□□□□□ -2.04
COL15A1P39059 MIR5694-201ENST00000581190 76 ntBASIC2.31□□□□□ -2.04
COL15A1P39059 AC078899.2-201ENST00000595282 212 ntBASIC2.31□□□□□ -2.04
COL15A1P39059 AC127459.3-201ENST00000624328 466 ntBASIC2.31□□□□□ -2.04
COL15A1P39059 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
COL15A1P39059 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
COL15A1P39059 MIR335-201ENST00000362173 94 ntBASIC2.3□□□□□ -2.04
COL15A1P39059 Y_RNA.14-201ENST00000362415 103 ntBASIC2.3□□□□□ -2.04
COL15A1P39059 SNORD65B-201ENST00000459126 73 ntBASIC2.3□□□□□ -2.04
COL15A1P39059 AC010598.1-201ENST00000510378 103 ntBASIC2.3□□□□□ -2.04
COL15A1P39059 SERF1AP1-201ENST00000514575 187 ntBASIC2.3□□□□□ -2.04
COL15A1P39059 RNU6-436P-201ENST00000516171 114 ntBASIC2.3□□□□□ -2.04
COL15A1P39059 RNU6-1146P-201ENST00000516282 102 ntBASIC2.3□□□□□ -2.04
COL15A1P39059 RNU7-193P-201ENST00000516723 65 ntBASIC2.3□□□□□ -2.04
COL15A1P39059 AC087441.2-201ENST00000529141 262 ntBASIC2.3□□□□□ -2.04
COL15A1P39059 AC023157.2-201ENST00000540596 141 ntBASIC2.3□□□□□ -2.04
COL15A1P39059 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.3□□□□□ -2.04
COL15A1P39059 MIR4303-201ENST00000581299 66 ntBASIC2.3□□□□□ -2.04
COL15A1P39059 AC007229.1-201ENST00000590455 412 ntBASIC2.3□□□□□ -2.04
COL15A1P39059 AL512605.2-201ENST00000592972 256 ntBASIC2.3□□□□□ -2.04
COL15A1P39059 DEFB117-201ENST00000602356 141 ntBASIC2.3□□□□□ -2.04
COL15A1P39059 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
COL15A1P39059 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
COL15A1P39059 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
COL15A1P39059 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
COL15A1P39059 MIR340-201ENST00000362125 95 ntBASIC2.29□□□□□ -2.04
COL15A1P39059 RNU6-271P-201ENST00000363858 105 ntBASIC2.29□□□□□ -2.04
COL15A1P39059 Y_RNA.188-201ENST00000363952 111 ntBASIC2.29□□□□□ -2.04
COL15A1P39059 RNU6-407P-201ENST00000365280 104 ntBASIC2.29□□□□□ -2.04
COL15A1P39059 Y_RNA.350-201ENST00000365409 98 ntBASIC2.29□□□□□ -2.04
COL15A1P39059 SNORA20B-201ENST00000384220 132 ntBASIC2.29□□□□□ -2.04
COL15A1P39059 MIR29C-201ENST00000385231 88 ntBASIC2.29□□□□□ -2.04
COL15A1P39059 RNU6-1248P-201ENST00000391096 64 ntBASIC2.29□□□□□ -2.04
COL15A1P39059 HMGN2P34-201ENST00000437647 269 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms