Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 RNU1-23P-201ENST00000363361 144 ntBASIC3.46□□□□□ -1.86
GPC1P35052 RNU6-442P-201ENST00000383968 104 ntBASIC3.46□□□□□ -1.86
GPC1P35052 MIR184-201ENST00000384962 84 ntBASIC3.46□□□□□ -1.86
GPC1P35052 RNA5SP323-201ENST00000391094 133 ntBASIC3.46□□□□□ -1.86
GPC1P35052 AC009238.1-201ENST00000442165 424 ntBASIC3.46□□□□□ -1.86
GPC1P35052 RPS29P31-201ENST00000446147 164 ntBASIC3.46□□□□□ -1.86
GPC1P35052 AC009237.6-201ENST00000446969 424 ntBASIC3.46□□□□□ -1.86
GPC1P35052 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.46□□□□□ -1.86
GPC1P35052 RNU1-142P-201ENST00000516682 145 ntBASIC3.46□□□□□ -1.86
GPC1P35052 RNU7-6P-201ENST00000516845 62 ntBASIC3.46□□□□□ -1.86
GPC1P35052 SNORA18.7-201ENST00000516910 131 ntBASIC3.46□□□□□ -1.86
GPC1P35052 SCARNA11.3-201ENST00000517276 130 ntBASIC3.46□□□□□ -1.86
GPC1P35052 AC091544.4-201ENST00000555268 342 ntBASIC3.46□□□□□ -1.86
GPC1P35052 MIR4305-201ENST00000583252 102 ntBASIC3.46□□□□□ -1.86
GPC1P35052 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.46□□□□□ -1.86
GPC1P35052 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
GPC1P35052 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
GPC1P35052 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
GPC1P35052 AC008264.2-201ENST00000610193 3731 ntBASIC3.45□□□□□ -1.86
GPC1P35052 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
GPC1P35052 MIR340-201ENST00000362125 95 ntBASIC3.45□□□□□ -1.86
GPC1P35052 SNORA1B-201ENST00000362535 133 ntBASIC3.45□□□□□ -1.86
GPC1P35052 RNU6-1328P-201ENST00000410938 106 ntBASIC3.45□□□□□ -1.86
GPC1P35052 AC006989.1-201ENST00000427212 131 ntBASIC3.45□□□□□ -1.86
GPC1P35052 RNU6-893P-201ENST00000458841 100 ntBASIC3.45□□□□□ -1.86
GPC1P35052 AC106707.2-201ENST00000484182 374 ntBASIC3.45□□□□□ -1.86
GPC1P35052 SCARNA3-201ENST00000517097 143 ntBASIC3.45□□□□□ -1.86
GPC1P35052 AL358944.1-201ENST00000528537 144 ntBASIC3.45□□□□□ -1.86
GPC1P35052 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.45□□□□□ -1.86
GPC1P35052 AC034105.4-201ENST00000568304 277 ntBASIC3.45□□□□□ -1.86
GPC1P35052 SNORA50A-202ENST00000629536 136 ntBASIC3.45□□□□□ -1.86
GPC1P35052 MIR7515-201ENST00000637837 67 ntBASIC3.45□□□□□ -1.86
GPC1P35052 PWAR6-201ENST00000552334 4618 ntBASIC3.45□□□□□ -1.86
GPC1P35052 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
GPC1P35052 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
GPC1P35052 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.45□□□□□ -1.86
GPC1P35052 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
GPC1P35052 AC245060.5-201ENST00000610778 3293 ntBASIC3.44□□□□□ -1.86
GPC1P35052 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
GPC1P35052 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.44□□□□□ -1.86
GPC1P35052 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
GPC1P35052 RNU4-16P-201ENST00000364737 141 ntBASIC3.44□□□□□ -1.86
GPC1P35052 Y_RNA.547-201ENST00000384654 119 ntBASIC3.44□□□□□ -1.86
GPC1P35052 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.44□□□□□ -1.86
GPC1P35052 SNORA57.3-201ENST00000411095 141 ntBASIC3.44□□□□□ -1.86
GPC1P35052 AL445646.1-201ENST00000431784 216 ntBASIC3.44□□□□□ -1.86
GPC1P35052 SCARNA23-201ENST00000516060 130 ntBASIC3.44□□□□□ -1.86
GPC1P35052 SNORD59.2-201ENST00000516873 68 ntBASIC3.44□□□□□ -1.86
GPC1P35052 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.44□□□□□ -1.86
GPC1P35052 AC006441.5-201ENST00000612680 209 ntBASIC3.44□□□□□ -1.86
GPC1P35052 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
GPC1P35052 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
GPC1P35052 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
GPC1P35052 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.44□□□□□ -1.86
GPC1P35052 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
GPC1P35052 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.43□□□□□ -1.86
GPC1P35052 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
GPC1P35052 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
GPC1P35052 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
GPC1P35052 MIR342-201ENST00000362212 99 ntBASIC3.43□□□□□ -1.86
GPC1P35052 Y_RNA.351-201ENST00000365436 96 ntBASIC3.43□□□□□ -1.86
GPC1P35052 MIR1912-201ENST00000410389 80 ntBASIC3.43□□□□□ -1.86
GPC1P35052 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.43□□□□□ -1.86
GPC1P35052 AP002004.2-201ENST00000531656 154 ntBASIC3.43□□□□□ -1.86
GPC1P35052 MIR4738-201ENST00000579134 87 ntBASIC3.43□□□□□ -1.86
GPC1P35052 MIR5187-201ENST00000583479 76 ntBASIC3.43□□□□□ -1.86
GPC1P35052 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.43□□□□□ -1.86
GPC1P35052 MIR338-201ENST00000636369 67 ntBASIC3.43□□□□□ -1.86
GPC1P35052 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
GPC1P35052 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
GPC1P35052 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.43□□□□□ -1.86
GPC1P35052 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
GPC1P35052 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
GPC1P35052 FAM35CP-201ENST00000554755 2470 ntBASIC3.42□□□□□ -1.86
GPC1P35052 SNORA33-201ENST00000363664 130 ntBASIC3.42□□□□□ -1.86
GPC1P35052 Y_RNA.440-201ENST00000384120 114 ntBASIC3.42□□□□□ -1.86
GPC1P35052 SNORA48.7-201ENST00000391302 135 ntBASIC3.42□□□□□ -1.86
GPC1P35052 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.42□□□□□ -1.86
GPC1P35052 Y_RNA.593-201ENST00000410292 98 ntBASIC3.42□□□□□ -1.86
GPC1P35052 SNX2P2-201ENST00000424553 323 ntBASIC3.42□□□□□ -1.86
GPC1P35052 AL357552.1-201ENST00000445254 415 ntBASIC3.42□□□□□ -1.86
GPC1P35052 SNORA84-201ENST00000459229 133 ntBASIC3.42□□□□□ -1.86
GPC1P35052 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.42□□□□□ -1.86
GPC1P35052 AC006130.2-201ENST00000586202 326 ntBASIC3.42□□□□□ -1.86
GPC1P35052 HSPE1P19-201ENST00000603327 295 ntBASIC3.42□□□□□ -1.86
GPC1P35052 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.42□□□□□ -1.86
GPC1P35052 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
GPC1P35052 Y_RNA.17-201ENST00000362433 111 ntBASIC3.41□□□□□ -1.86
GPC1P35052 RNU6-268P-201ENST00000364174 107 ntBASIC3.41□□□□□ -1.86
GPC1P35052 SNORA14A-201ENST00000364773 135 ntBASIC3.41□□□□□ -1.86
GPC1P35052 SNORA8-201ENST00000384574 139 ntBASIC3.41□□□□□ -1.86
GPC1P35052 SNORA48.8-201ENST00000391324 134 ntBASIC3.41□□□□□ -1.86
GPC1P35052 CYP2C59P-201ENST00000457790 269 ntBASIC3.41□□□□□ -1.86
GPC1P35052 RNU2-35P-201ENST00000516446 142 ntBASIC3.41□□□□□ -1.86
GPC1P35052 AP003484.1-201ENST00000530974 250 ntBASIC3.41□□□□□ -1.86
GPC1P35052 MIR4778-201ENST00000577635 80 ntBASIC3.41□□□□□ -1.86
GPC1P35052 MIR4425-201ENST00000580572 84 ntBASIC3.41□□□□□ -1.86
GPC1P35052 MIR7157-201ENST00000635801 60 ntBASIC3.41□□□□□ -1.86
GPC1P35052 U6.108-201ENST00000637764 58 ntBASIC3.41□□□□□ -1.86
GPC1P35052 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 265 ms