Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.73□□□□□ -1.81
VARSP26640 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.73□□□□□ -1.81
VARSP26640 MIR4305-201ENST00000583252 102 ntBASIC3.73□□□□□ -1.81
VARSP26640 RNVU1-4-201ENST00000612985 164 ntBASIC3.73□□□□□ -1.81
VARSP26640 FAM35CP-201ENST00000554755 2470 ntBASIC3.73□□□□□ -1.81
VARSP26640 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VARSP26640 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.73□□□□□ -1.81
VARSP26640 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VARSP26640 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.72□□□□□ -1.81
VARSP26640 Y_RNA.37-201ENST00000362606 108 ntBASIC3.72□□□□□ -1.81
VARSP26640 SNORD115-28-201ENST00000363931 81 ntBASIC3.72□□□□□ -1.81
VARSP26640 RNA5SP72-201ENST00000364442 117 ntBASIC3.72□□□□□ -1.81
VARSP26640 CD24P4-201ENST00000382840 243 ntBASIC3.72□□□□□ -1.81
VARSP26640 RNU6-546P-201ENST00000383991 107 ntBASIC3.72□□□□□ -1.81
VARSP26640 MIR522-201ENST00000385071 87 ntBASIC3.72□□□□□ -1.81
VARSP26640 SNORA3.3-201ENST00000408712 125 ntBASIC3.72□□□□□ -1.81
VARSP26640 AC123900.1-201ENST00000420390 96 ntBASIC3.72□□□□□ -1.81
VARSP26640 FTH1P12-201ENST00000432137 551 ntBASIC3.72□□□□□ -1.81
VARSP26640 RNU7-61P-201ENST00000515897 61 ntBASIC3.72□□□□□ -1.81
VARSP26640 RNU2-13P-201ENST00000515909 113 ntBASIC3.72□□□□□ -1.81
VARSP26640 SNORD36C-201ENST00000516733 66 ntBASIC3.72□□□□□ -1.81
VARSP26640 RNU6-341P-201ENST00000516973 96 ntBASIC3.72□□□□□ -1.81
VARSP26640 RNU7-128P-201ENST00000517247 62 ntBASIC3.72□□□□□ -1.81
VARSP26640 AC022254.1-201ENST00000567857 235 ntBASIC3.72□□□□□ -1.81
VARSP26640 FAM71BP1-201ENST00000604431 523 ntBASIC3.72□□□□□ -1.81
VARSP26640 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.72□□□□□ -1.81
VARSP26640 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VARSP26640 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VARSP26640 AC080128.1-201ENST00000474389 1917 ntBASIC3.72□□□□□ -1.81
VARSP26640 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
VARSP26640 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.81
VARSP26640 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
VARSP26640 RNA5SP467-201ENST00000391274 118 ntBASIC3.71□□□□□ -1.82
VARSP26640 Y_RNA.601-201ENST00000410500 113 ntBASIC3.71□□□□□ -1.82
VARSP26640 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.71□□□□□ -1.82
VARSP26640 AC009414.1-201ENST00000427200 443 ntBASIC3.71□□□□□ -1.82
VARSP26640 TRBV12-2-201ENST00000489763 344 ntBASIC3.71□□□□□ -1.82
VARSP26640 AC026403.1-201ENST00000518938 295 ntBASIC3.71□□□□□ -1.82
VARSP26640 AC022695.1-201ENST00000522089 237 ntBASIC3.71□□□□□ -1.82
VARSP26640 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
VARSP26640 AC091544.4-201ENST00000555268 342 ntBASIC3.71□□□□□ -1.82
VARSP26640 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.71□□□□□ -1.82
VARSP26640 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VARSP26640 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
VARSP26640 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
VARSP26640 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VARSP26640 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VARSP26640 RNU6-1099P-201ENST00000363533 107 ntBASIC3.7□□□□□ -1.82
VARSP26640 RNU6-497P-201ENST00000365316 104 ntBASIC3.7□□□□□ -1.82
VARSP26640 MIR199A2-201ENST00000385289 110 ntBASIC3.7□□□□□ -1.82
VARSP26640 AC093259.1-201ENST00000509755 300 ntBASIC3.7□□□□□ -1.82
VARSP26640 RNA5SP208-201ENST00000516156 78 ntBASIC3.7□□□□□ -1.82
VARSP26640 RNU6-991P-201ENST00000516168 107 ntBASIC3.7□□□□□ -1.82
VARSP26640 RNU2-35P-201ENST00000516446 142 ntBASIC3.7□□□□□ -1.82
VARSP26640 RNA5SP164-201ENST00000516533 110 ntBASIC3.7□□□□□ -1.82
VARSP26640 RNA5SP395-201ENST00000516567 118 ntBASIC3.7□□□□□ -1.82
VARSP26640 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.7□□□□□ -1.82
VARSP26640 AC006441.5-201ENST00000612680 209 ntBASIC3.7□□□□□ -1.82
VARSP26640 AC012314.7-201ENST00000619693 93 ntBASIC3.7□□□□□ -1.82
VARSP26640 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.7□□□□□ -1.82
VARSP26640 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
VARSP26640 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.69□□□□□ -1.82
VARSP26640 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VARSP26640 ICE2P2-201ENST00000483823 2787 ntBASIC3.69□□□□□ -1.82
VARSP26640 MAPK10-362ENST00000641864 4484 ntBASIC3.69□□□□□ -1.82
VARSP26640 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VARSP26640 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VARSP26640 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VARSP26640 snoU2-30.2-201ENST00000362805 70 ntBASIC3.69□□□□□ -1.82
VARSP26640 SNORA33-201ENST00000363664 130 ntBASIC3.69□□□□□ -1.82
VARSP26640 Y_RNA.351-201ENST00000365436 96 ntBASIC3.69□□□□□ -1.82
VARSP26640 Y_RNA.531-201ENST00000384589 121 ntBASIC3.69□□□□□ -1.82
VARSP26640 Y_RNA.547-201ENST00000384654 119 ntBASIC3.69□□□□□ -1.82
VARSP26640 AL353689.1-201ENST00000438895 199 ntBASIC3.69□□□□□ -1.82
VARSP26640 RPS29P31-201ENST00000446147 164 ntBASIC3.69□□□□□ -1.82
VARSP26640 AL049830.1-201ENST00000468034 425 ntBASIC3.69□□□□□ -1.82
VARSP26640 RNU6-162P-201ENST00000516228 103 ntBASIC3.69□□□□□ -1.82
VARSP26640 AL358944.1-201ENST00000528537 144 ntBASIC3.69□□□□□ -1.82
VARSP26640 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.69□□□□□ -1.82
VARSP26640 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.69□□□□□ -1.82
VARSP26640 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
VARSP26640 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VARSP26640 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VARSP26640 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.68□□□□□ -1.82
VARSP26640 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.68□□□□□ -1.82
VARSP26640 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
VARSP26640 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
VARSP26640 AC073346.2-201ENST00000624724 2058 ntBASIC3.68□□□□□ -1.82
VARSP26640 Y_RNA.73-201ENST00000362910 113 ntBASIC3.68□□□□□ -1.82
VARSP26640 Y_RNA.221-201ENST00000364248 96 ntBASIC3.68□□□□□ -1.82
VARSP26640 Y_RNA.332-201ENST00000365271 113 ntBASIC3.68□□□□□ -1.82
VARSP26640 RNU6-442P-201ENST00000383968 104 ntBASIC3.68□□□□□ -1.82
VARSP26640 Y_RNA.440-201ENST00000384120 114 ntBASIC3.68□□□□□ -1.82
VARSP26640 RNU6-242P-201ENST00000384359 107 ntBASIC3.68□□□□□ -1.82
VARSP26640 RNU6-644P-201ENST00000391155 98 ntBASIC3.68□□□□□ -1.82
VARSP26640 AL445646.1-201ENST00000431784 216 ntBASIC3.68□□□□□ -1.82
VARSP26640 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.68□□□□□ -1.82
VARSP26640 RN7SL323P-201ENST00000494712 295 ntBASIC3.68□□□□□ -1.82
VARSP26640 SCARNA14-201ENST00000516903 136 ntBASIC3.68□□□□□ -1.82
VARSP26640 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 199.1 ms