Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.48□□□□□ -2.01
CD40P25942 AC018630.2-201ENST00000534866 2403 ntBASIC2.48□□□□□ -2.01
CD40P25942 RNU6-674P-201ENST00000363831 107 ntBASIC2.48□□□□□ -2.01
CD40P25942 RNU4-41P-201ENST00000364426 143 ntBASIC2.48□□□□□ -2.01
CD40P25942 Y_RNA.267-201ENST00000364679 109 ntBASIC2.48□□□□□ -2.01
CD40P25942 RNU6-1062P-201ENST00000383908 107 ntBASIC2.48□□□□□ -2.01
CD40P25942 MT-TT-201ENST00000387460 66 ntBASIC2.48□□□□□ -2.01
CD40P25942 MIR1283-2-201ENST00000408621 87 ntBASIC2.48□□□□□ -2.01
CD40P25942 AC105272.1-201ENST00000438604 198 ntBASIC2.48□□□□□ -2.01
CD40P25942 AC024995.1-201ENST00000523014 93 ntBASIC2.48□□□□□ -2.01
CD40P25942 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.48□□□□□ -2.01
CD40P25942 AC100821.1-201ENST00000523153 2479 ntBASIC2.47□□□□□ -2.01
CD40P25942 ZNF271P-202ENST00000465539 1970 ntBASIC2.47□□□□□ -2.01
CD40P25942 VTRNA1-1-201ENST00000363120 99 ntBASIC2.47□□□□□ -2.01
CD40P25942 RNU6-103P-201ENST00000363686 107 ntBASIC2.47□□□□□ -2.01
CD40P25942 Y_RNA.203-201ENST00000364106 102 ntBASIC2.47□□□□□ -2.01
CD40P25942 SNORA3A-201ENST00000364113 130 ntBASIC2.47□□□□□ -2.01
CD40P25942 RNU6-1080P-201ENST00000383982 107 ntBASIC2.47□□□□□ -2.01
CD40P25942 MIR616-201ENST00000385293 97 ntBASIC2.47□□□□□ -2.01
CD40P25942 AC087499.2-201ENST00000432861 149 ntBASIC2.47□□□□□ -2.01
CD40P25942 HMGN2P3-201ENST00000433603 273 ntBASIC2.47□□□□□ -2.01
CD40P25942 HMGN2P5-201ENST00000436882 273 ntBASIC2.47□□□□□ -2.01
CD40P25942 RPS26P45-201ENST00000471748 340 ntBASIC2.47□□□□□ -2.01
CD40P25942 RPS27AP9-201ENST00000477681 438 ntBASIC2.47□□□□□ -2.01
CD40P25942 RN7SKP43-201ENST00000516173 320 ntBASIC2.47□□□□□ -2.01
CD40P25942 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.47□□□□□ -2.01
CD40P25942 MRPS18CP4-201ENST00000535821 231 ntBASIC2.47□□□□□ -2.01
CD40P25942 MIR4744-201ENST00000581563 82 ntBASIC2.47□□□□□ -2.01
CD40P25942 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.47□□□□□ -2.01
CD40P25942 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CD40P25942 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.46□□□□□ -2.02
CD40P25942 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CD40P25942 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
CD40P25942 RNU1-52P-201ENST00000384190 164 ntBASIC2.46□□□□□ -2.02
CD40P25942 RPL21P3-201ENST00000395517 478 ntBASIC2.46□□□□□ -2.02
CD40P25942 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.46□□□□□ -2.02
CD40P25942 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.46□□□□□ -2.02
CD40P25942 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.46□□□□□ -2.02
CD40P25942 RNA5SP356-201ENST00000515972 94 ntBASIC2.46□□□□□ -2.02
CD40P25942 MIR5094-201ENST00000578766 85 ntBASIC2.46□□□□□ -2.02
CD40P25942 AL391903.3-201ENST00000612158 163 ntBASIC2.46□□□□□ -2.02
CD40P25942 MIR6852-201ENST00000621699 66 ntBASIC2.46□□□□□ -2.02
CD40P25942 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CD40P25942 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CD40P25942 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
CD40P25942 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
CD40P25942 Y_RNA.75-201ENST00000362927 97 ntBASIC2.45□□□□□ -2.02
CD40P25942 RNU6-578P-201ENST00000390980 103 ntBASIC2.45□□□□□ -2.02
CD40P25942 RNA5SP465-201ENST00000391195 109 ntBASIC2.45□□□□□ -2.02
CD40P25942 RN7SKP132-201ENST00000516001 208 ntBASIC2.45□□□□□ -2.02
CD40P25942 RNU6-341P-201ENST00000516973 96 ntBASIC2.45□□□□□ -2.02
CD40P25942 AC069114.2-201ENST00000604699 304 ntBASIC2.45□□□□□ -2.02
CD40P25942 AC108706.1-201ENST00000611053 297 ntBASIC2.45□□□□□ -2.02
CD40P25942 AC108206.1-201ENST00000570186 4159 ntBASIC2.45□□□□□ -2.02
CD40P25942 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.44□□□□□ -2.02
CD40P25942 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.44□□□□□ -2.02
CD40P25942 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.44□□□□□ -2.02
CD40P25942 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CD40P25942 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CD40P25942 RNU6-275P-201ENST00000364910 107 ntBASIC2.44□□□□□ -2.02
CD40P25942 Y_RNA.464-201ENST00000384282 110 ntBASIC2.44□□□□□ -2.02
CD40P25942 MIR512-1-201ENST00000384913 84 ntBASIC2.44□□□□□ -2.02
CD40P25942 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.44□□□□□ -2.02
CD40P25942 AL512604.1-201ENST00000404812 257 ntBASIC2.44□□□□□ -2.02
CD40P25942 AL606845.1-201ENST00000404881 255 ntBASIC2.44□□□□□ -2.02
CD40P25942 RNU7-94P-201ENST00000459576 63 ntBASIC2.44□□□□□ -2.02
CD40P25942 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.44□□□□□ -2.02
CD40P25942 RPL23AP91-201ENST00000569211 455 ntBASIC2.44□□□□□ -2.02
CD40P25942 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.44□□□□□ -2.02
CD40P25942 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CD40P25942 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CD40P25942 AC008264.2-201ENST00000610193 3731 ntBASIC2.43□□□□□ -2.02
CD40P25942 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CD40P25942 RNU1-35P-201ENST00000362782 153 ntBASIC2.43□□□□□ -2.02
CD40P25942 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.43□□□□□ -2.02
CD40P25942 RNU5E-9P-201ENST00000411164 104 ntBASIC2.43□□□□□ -2.02
CD40P25942 AC063976.3-201ENST00000426849 329 ntBASIC2.43□□□□□ -2.02
CD40P25942 SUMO1P3-201ENST00000439961 304 ntBASIC2.43□□□□□ -2.02
CD40P25942 AC109810.1-201ENST00000534066 224 ntBASIC2.43□□□□□ -2.02
CD40P25942 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.43□□□□□ -2.02
CD40P25942 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.43□□□□□ -2.02
CD40P25942 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.43□□□□□ -2.02
CD40P25942 AC104465.1-201ENST00000611365 139 ntBASIC2.43□□□□□ -2.02
CD40P25942 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
CD40P25942 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CD40P25942 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CD40P25942 AC093831.2-201ENST00000624393 3427 ntBASIC2.42□□□□□ -2.02
CD40P25942 Y_RNA.23-201ENST00000362496 106 ntBASIC2.42□□□□□ -2.02
CD40P25942 RNU6-1209P-201ENST00000363655 107 ntBASIC2.42□□□□□ -2.02
CD40P25942 RNU6-312P-201ENST00000364629 107 ntBASIC2.42□□□□□ -2.02
CD40P25942 Y_RNA.500-201ENST00000384466 111 ntBASIC2.42□□□□□ -2.02
CD40P25942 RNA5SP109-201ENST00000391010 116 ntBASIC2.42□□□□□ -2.02
CD40P25942 RNA5SP496-201ENST00000391240 109 ntBASIC2.42□□□□□ -2.02
CD40P25942 RN7SKP101-201ENST00000411376 320 ntBASIC2.42□□□□□ -2.02
CD40P25942 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.42□□□□□ -2.02
CD40P25942 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.42□□□□□ -2.02
CD40P25942 SEPT7P4-201ENST00000437076 306 ntBASIC2.42□□□□□ -2.02
CD40P25942 AL606517.2-201ENST00000442855 241 ntBASIC2.42□□□□□ -2.02
CD40P25942 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.42□□□□□ -2.02
CD40P25942 RN7SL75P-201ENST00000461926 281 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 180.8 ms