Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.03□□□□□ -2.08
TNFSF4P23510 AC026436.1-201ENST00000510537 270 ntBASIC2.03□□□□□ -2.08
TNFSF4P23510 RNU2-31P-201ENST00000516954 155 ntBASIC2.03□□□□□ -2.08
TNFSF4P23510 RNU6-1096P-201ENST00000517089 102 ntBASIC2.03□□□□□ -2.08
TNFSF4P23510 AC005972.2-201ENST00000604690 348 ntBASIC2.03□□□□□ -2.08
TNFSF4P23510 AC103810.8-201ENST00000607347 118 ntBASIC2.03□□□□□ -2.08
TNFSF4P23510 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.03□□□□□ -2.08
TNFSF4P23510 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
TNFSF4P23510 MIR449A-201ENST00000362113 91 ntBASIC2.02□□□□□ -2.09
TNFSF4P23510 RNU4-82P-201ENST00000362443 140 ntBASIC2.02□□□□□ -2.09
TNFSF4P23510 Y_RNA.84-201ENST00000363011 104 ntBASIC2.02□□□□□ -2.09
TNFSF4P23510 Y_RNA.267-201ENST00000364679 109 ntBASIC2.02□□□□□ -2.09
TNFSF4P23510 Y_RNA.310-201ENST00000365063 113 ntBASIC2.02□□□□□ -2.09
TNFSF4P23510 SNORA4.2-201ENST00000365313 147 ntBASIC2.02□□□□□ -2.09
TNFSF4P23510 Y_RNA.541-201ENST00000384640 113 ntBASIC2.02□□□□□ -2.09
TNFSF4P23510 RNU6-136P-201ENST00000384663 107 ntBASIC2.02□□□□□ -2.09
TNFSF4P23510 MIR215-201ENST00000384858 110 ntBASIC2.02□□□□□ -2.09
TNFSF4P23510 RNU6-440P-201ENST00000390882 105 ntBASIC2.02□□□□□ -2.09
TNFSF4P23510 AL358176.2-201ENST00000425769 204 ntBASIC2.02□□□□□ -2.09
TNFSF4P23510 RNU7-34P-201ENST00000459394 64 ntBASIC2.02□□□□□ -2.09
TNFSF4P23510 RNU2-56P-201ENST00000516826 190 ntBASIC2.02□□□□□ -2.09
TNFSF4P23510 AC091544.4-201ENST00000555268 342 ntBASIC2.02□□□□□ -2.09
TNFSF4P23510 AC008269.2-201ENST00000561915 1105 ntBASIC2.02□□□□□ -2.09
TNFSF4P23510 AC103810.6-201ENST00000606708 136 ntBASIC2.02□□□□□ -2.09
TNFSF4P23510 SNORA28-201ENST00000606769 126 ntBASIC2.02□□□□□ -2.09
TNFSF4P23510 AC067747.1-201ENST00000608026 250 ntBASIC2.02□□□□□ -2.09
TNFSF4P23510 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.02□□□□□ -2.09
TNFSF4P23510 AC016717.2-201ENST00000609089 5141 ntBASIC2.02□□□□□ -2.09
TNFSF4P23510 ZNF658B-202ENST00000615961 3375 ntBASIC2.02□□□□□ -2.09
TNFSF4P23510 AL359851.1-201ENST00000569460 4997 ntBASIC2.02□□□□□ -2.09
TNFSF4P23510 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
TNFSF4P23510 Y_RNA.149-201ENST00000363558 117 ntBASIC2.01□□□□□ -2.09
TNFSF4P23510 RNU6-514P-201ENST00000384208 107 ntBASIC2.01□□□□□ -2.09
TNFSF4P23510 AL034345.1-201ENST00000407768 123 ntBASIC2.01□□□□□ -2.09
TNFSF4P23510 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.01□□□□□ -2.09
TNFSF4P23510 AL118496.2-201ENST00000448300 230 ntBASIC2.01□□□□□ -2.09
TNFSF4P23510 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.01□□□□□ -2.09
TNFSF4P23510 RNU7-28P-201ENST00000516759 62 ntBASIC2.01□□□□□ -2.09
TNFSF4P23510 MIR8074-201ENST00000615081 81 ntBASIC2.01□□□□□ -2.09
TNFSF4P23510 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
TNFSF4P23510 SNORA25.1-201ENST00000362326 128 ntBASIC2□□□□□ -2.09
TNFSF4P23510 RNU6-238P-201ENST00000363313 106 ntBASIC2□□□□□ -2.09
TNFSF4P23510 Y_RNA.172-201ENST00000363765 102 ntBASIC2□□□□□ -2.09
TNFSF4P23510 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2□□□□□ -2.09
TNFSF4P23510 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2□□□□□ -2.09
TNFSF4P23510 RNU6-1203P-201ENST00000410703 110 ntBASIC2□□□□□ -2.09
TNFSF4P23510 MTCO1P5-201ENST00000433573 344 ntBASIC2□□□□□ -2.09
TNFSF4P23510 HSPE1P21-201ENST00000438283 308 ntBASIC2□□□□□ -2.09
TNFSF4P23510 JTBP1-201ENST00000441314 247 ntBASIC2□□□□□ -2.09
TNFSF4P23510 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2□□□□□ -2.09
TNFSF4P23510 RNU6-191P-201ENST00000516295 94 ntBASIC2□□□□□ -2.09
TNFSF4P23510 SNORA31.10-201ENST00000516482 106 ntBASIC2□□□□□ -2.09
TNFSF4P23510 RNU6-1291P-201ENST00000516591 104 ntBASIC2□□□□□ -2.09
TNFSF4P23510 RNU7-116P-201ENST00000516940 62 ntBASIC2□□□□□ -2.09
TNFSF4P23510 AL929325.1-201ENST00000603096 117 ntBASIC2□□□□□ -2.09
TNFSF4P23510 MIR8062-201ENST00000621515 85 ntBASIC2□□□□□ -2.09
TNFSF4P23510 AC100821.1-201ENST00000523153 2479 ntBASIC2□□□□□ -2.09
TNFSF4P23510 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
TNFSF4P23510 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
TNFSF4P23510 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
TNFSF4P23510 AC005336.3-201ENST00000623833 2679 ntBASIC1.99□□□□□ -2.09
TNFSF4P23510 RNU6-1323P-201ENST00000384025 107 ntBASIC1.99□□□□□ -2.09
TNFSF4P23510 RNU6-439P-201ENST00000384188 106 ntBASIC1.99□□□□□ -2.09
TNFSF4P23510 RNU6-1031P-201ENST00000384773 107 ntBASIC1.99□□□□□ -2.09
TNFSF4P23510 RNU6-1105P-201ENST00000384774 107 ntBASIC1.99□□□□□ -2.09
TNFSF4P23510 MIR30A-201ENST00000385092 71 ntBASIC1.99□□□□□ -2.09
TNFSF4P23510 MIR1267-201ENST00000408723 78 ntBASIC1.99□□□□□ -2.09
TNFSF4P23510 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.99□□□□□ -2.09
TNFSF4P23510 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.99□□□□□ -2.09
TNFSF4P23510 RPS4XP11-201ENST00000446897 772 ntBASIC1.99□□□□□ -2.09
TNFSF4P23510 U8.19-201ENST00000459095 133 ntBASIC1.99□□□□□ -2.09
TNFSF4P23510 TRBVB-201ENST00000477100 408 ntBASIC1.99□□□□□ -2.09
TNFSF4P23510 SCARNA16.3-201ENST00000516595 184 ntBASIC1.99□□□□□ -2.09
TNFSF4P23510 RNU6-570P-201ENST00000517051 105 ntBASIC1.99□□□□□ -2.09
TNFSF4P23510 AC136628.3-201ENST00000521868 290 ntBASIC1.99□□□□□ -2.09
TNFSF4P23510 MIR3198-2-201ENST00000577868 80 ntBASIC1.99□□□□□ -2.09
TNFSF4P23510 AL512605.2-201ENST00000592972 256 ntBASIC1.99□□□□□ -2.09
TNFSF4P23510 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.99□□□□□ -2.09
TNFSF4P23510 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
TNFSF4P23510 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
TNFSF4P23510 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
TNFSF4P23510 SNORA1B-201ENST00000362535 133 ntBASIC1.98□□□□□ -2.09
TNFSF4P23510 RNU6-1309P-201ENST00000363305 108 ntBASIC1.98□□□□□ -2.09
TNFSF4P23510 Y_RNA.265-201ENST00000364677 108 ntBASIC1.98□□□□□ -2.09
TNFSF4P23510 SNORA72-201ENST00000384339 132 ntBASIC1.98□□□□□ -2.09
TNFSF4P23510 MIR1302-6-201ENST00000408466 90 ntBASIC1.98□□□□□ -2.09
TNFSF4P23510 RNU4-53P-201ENST00000410828 140 ntBASIC1.98□□□□□ -2.09
TNFSF4P23510 AC233266.1-201ENST00000454518 96 ntBASIC1.98□□□□□ -2.09
TNFSF4P23510 RNU6-1338P-201ENST00000516328 91 ntBASIC1.98□□□□□ -2.09
TNFSF4P23510 AC242852.1-201ENST00000612151 96 ntBASIC1.98□□□□□ -2.09
TNFSF4P23510 MIR6132-201ENST00000622083 109 ntBASIC1.98□□□□□ -2.09
TNFSF4P23510 AC244015.1-201ENST00000622301 99 ntBASIC1.98□□□□□ -2.09
TNFSF4P23510 AC068647.2-201ENST00000637380 353 ntBASIC1.98□□□□□ -2.09
TNFSF4P23510 Y_RNA.47-201ENST00000362697 108 ntBASIC1.97□□□□□ -2.09
TNFSF4P23510 Y_RNA.376-201ENST00000365638 108 ntBASIC1.97□□□□□ -2.09
TNFSF4P23510 RNA5SP482-201ENST00000391269 118 ntBASIC1.97□□□□□ -2.09
TNFSF4P23510 RNA5SP489-201ENST00000410986 109 ntBASIC1.97□□□□□ -2.09
TNFSF4P23510 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.97□□□□□ -2.09
TNFSF4P23510 AL049830.1-201ENST00000468034 425 ntBASIC1.97□□□□□ -2.09
TNFSF4P23510 AC008413.1-201ENST00000511864 177 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms