Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 RNU6-965P-201ENST00000516721 96 ntBASIC3.39□□□□□ -1.87
THBS1P07996 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.39□□□□□ -1.87
THBS1P07996 MIR3186-201ENST00000577404 85 ntBASIC3.39□□□□□ -1.87
THBS1P07996 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
THBS1P07996 AC091152.2-201ENST00000591628 2569 ntBASIC3.39□□□□□ -1.87
THBS1P07996 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
THBS1P07996 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.39□□□□□ -1.87
THBS1P07996 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.38□□□□□ -1.87
THBS1P07996 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
THBS1P07996 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
THBS1P07996 RNU6-228P-201ENST00000362700 106 ntBASIC3.38□□□□□ -1.87
THBS1P07996 Y_RNA.267-201ENST00000364679 109 ntBASIC3.38□□□□□ -1.87
THBS1P07996 SNORA4.2-201ENST00000365313 147 ntBASIC3.38□□□□□ -1.87
THBS1P07996 GOT2P5-201ENST00000433995 546 ntBASIC3.38□□□□□ -1.87
THBS1P07996 AC087499.4-201ENST00000448505 178 ntBASIC3.38□□□□□ -1.87
THBS1P07996 PRSS3P4-201ENST00000453323 162 ntBASIC3.38□□□□□ -1.87
THBS1P07996 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.38□□□□□ -1.87
THBS1P07996 RNU6-579P-201ENST00000516879 102 ntBASIC3.38□□□□□ -1.87
THBS1P07996 AC026403.1-201ENST00000518938 295 ntBASIC3.38□□□□□ -1.87
THBS1P07996 AC008011.1-201ENST00000545989 227 ntBASIC3.38□□□□□ -1.87
THBS1P07996 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.38□□□□□ -1.87
THBS1P07996 MIR8058-201ENST00000615737 89 ntBASIC3.38□□□□□ -1.87
THBS1P07996 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.38□□□□□ -1.87
THBS1P07996 MIR7157-201ENST00000635801 60 ntBASIC3.38□□□□□ -1.87
THBS1P07996 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.38□□□□□ -1.87
THBS1P07996 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.38□□□□□ -1.87
THBS1P07996 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
THBS1P07996 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
THBS1P07996 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
THBS1P07996 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
THBS1P07996 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
THBS1P07996 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.37□□□□□ -1.87
THBS1P07996 MIR30B-201ENST00000384850 88 ntBASIC3.37□□□□□ -1.87
THBS1P07996 RNU6-1077P-201ENST00000410506 102 ntBASIC3.37□□□□□ -1.87
THBS1P07996 AC060773.1-201ENST00000421698 310 ntBASIC3.37□□□□□ -1.87
THBS1P07996 AL445646.1-201ENST00000431784 216 ntBASIC3.37□□□□□ -1.87
THBS1P07996 MICF-203ENST00000432679 129 ntBASIC3.37□□□□□ -1.87
THBS1P07996 AC244505.4-201ENST00000434905 287 ntBASIC3.37□□□□□ -1.87
THBS1P07996 AC009238.1-201ENST00000442165 424 ntBASIC3.37□□□□□ -1.87
THBS1P07996 SSXP5-201ENST00000443473 287 ntBASIC3.37□□□□□ -1.87
THBS1P07996 AL357552.1-201ENST00000445254 415 ntBASIC3.37□□□□□ -1.87
THBS1P07996 RPS29P31-201ENST00000446147 164 ntBASIC3.37□□□□□ -1.87
THBS1P07996 AC009237.6-201ENST00000446969 424 ntBASIC3.37□□□□□ -1.87
THBS1P07996 AL031183.1-201ENST00000457667 207 ntBASIC3.37□□□□□ -1.87
THBS1P07996 CYP2C59P-201ENST00000457790 269 ntBASIC3.37□□□□□ -1.87
THBS1P07996 AL049830.1-201ENST00000468034 425 ntBASIC3.37□□□□□ -1.87
THBS1P07996 RN7SL330P-201ENST00000469709 307 ntBASIC3.37□□□□□ -1.87
THBS1P07996 RNU1-142P-201ENST00000516682 145 ntBASIC3.37□□□□□ -1.87
THBS1P07996 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
THBS1P07996 AL021368.2-201ENST00000606125 5352 ntBASIC3.37□□□□□ -1.87
THBS1P07996 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
THBS1P07996 SNORA63.1-201ENST00000362493 131 ntBASIC3.36□□□□□ -1.87
THBS1P07996 RNU1-72P-201ENST00000362976 153 ntBASIC3.36□□□□□ -1.87
THBS1P07996 RNA5SP42-201ENST00000364278 115 ntBASIC3.36□□□□□ -1.87
THBS1P07996 Y_RNA.440-201ENST00000384120 114 ntBASIC3.36□□□□□ -1.87
THBS1P07996 MIR515-2-201ENST00000384883 83 ntBASIC3.36□□□□□ -1.87
THBS1P07996 MIR515-1-201ENST00000384884 83 ntBASIC3.36□□□□□ -1.87
THBS1P07996 MIR591-201ENST00000385290 95 ntBASIC3.36□□□□□ -1.87
THBS1P07996 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
THBS1P07996 SNORA57.3-201ENST00000411095 141 ntBASIC3.36□□□□□ -1.87
THBS1P07996 AC093578.1-201ENST00000415219 368 ntBASIC3.36□□□□□ -1.87
THBS1P07996 AL161788.1-201ENST00000441805 169 ntBASIC3.36□□□□□ -1.87
THBS1P07996 AC022137.1-201ENST00000483735 151 ntBASIC3.36□□□□□ -1.87
THBS1P07996 RNU7-6P-201ENST00000516845 62 ntBASIC3.36□□□□□ -1.87
THBS1P07996 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.36□□□□□ -1.87
THBS1P07996 MIR4694-201ENST00000578534 80 ntBASIC3.36□□□□□ -1.87
THBS1P07996 MIR4738-201ENST00000579134 87 ntBASIC3.36□□□□□ -1.87
THBS1P07996 MIR3944-201ENST00000581277 108 ntBASIC3.36□□□□□ -1.87
THBS1P07996 MIR5739-201ENST00000619803 80 ntBASIC3.36□□□□□ -1.87
THBS1P07996 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.36□□□□□ -1.87
THBS1P07996 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.36□□□□□ -1.87
THBS1P07996 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
THBS1P07996 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
THBS1P07996 RNU6-1099P-201ENST00000363533 107 ntBASIC3.35□□□□□ -1.87
THBS1P07996 SNORD46.1-201ENST00000364139 104 ntBASIC3.35□□□□□ -1.87
THBS1P07996 snoU2-30.1-201ENST00000365012 70 ntBASIC3.35□□□□□ -1.87
THBS1P07996 AL627390.1-201ENST00000396055 340 ntBASIC3.35□□□□□ -1.87
THBS1P07996 AC107083.1-201ENST00000439643 279 ntBASIC3.35□□□□□ -1.87
THBS1P07996 RPS12P18-201ENST00000442381 270 ntBASIC3.35□□□□□ -1.87
THBS1P07996 RPL39P39-201ENST00000455840 151 ntBASIC3.35□□□□□ -1.87
THBS1P07996 RNU1-95P-201ENST00000516357 160 ntBASIC3.35□□□□□ -1.87
THBS1P07996 RNU7-25P-201ENST00000516544 62 ntBASIC3.35□□□□□ -1.87
THBS1P07996 RNU1-128P-201ENST00000516704 160 ntBASIC3.35□□□□□ -1.87
THBS1P07996 SNORA18.7-201ENST00000516910 131 ntBASIC3.35□□□□□ -1.87
THBS1P07996 RNU7-128P-201ENST00000517247 62 ntBASIC3.35□□□□□ -1.87
THBS1P07996 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.35□□□□□ -1.87
THBS1P07996 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
THBS1P07996 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
THBS1P07996 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
THBS1P07996 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
THBS1P07996 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
THBS1P07996 RNU6-661P-201ENST00000362409 107 ntBASIC3.34□□□□□ -1.87
THBS1P07996 Y_RNA.290-201ENST00000364879 114 ntBASIC3.34□□□□□ -1.87
THBS1P07996 Y_RNA.336-201ENST00000365307 109 ntBASIC3.34□□□□□ -1.87
THBS1P07996 Y_RNA.351-201ENST00000365436 96 ntBASIC3.34□□□□□ -1.87
THBS1P07996 RNU6-1104P-201ENST00000384723 104 ntBASIC3.34□□□□□ -1.87
THBS1P07996 RNU6-938P-201ENST00000411285 103 ntBASIC3.34□□□□□ -1.87
THBS1P07996 AL353689.1-201ENST00000438895 199 ntBASIC3.34□□□□□ -1.87
THBS1P07996 PHBP14-201ENST00000512887 367 ntBASIC3.34□□□□□ -1.87
THBS1P07996 RNU2-27P-201ENST00000516185 142 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms