Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 Y_RNA.287-201ENST00000364853 94 ntBASIC1.73□□□□□ -2.13
CLPTM1O96005 SNORD48-201ENST00000364953 64 ntBASIC1.73□□□□□ -2.13
CLPTM1O96005 RNU6-290P-201ENST00000365212 101 ntBASIC1.73□□□□□ -2.13
CLPTM1O96005 Y_RNA.418-201ENST00000384029 102 ntBASIC1.73□□□□□ -2.13
CLPTM1O96005 RNU6-463P-201ENST00000384340 107 ntBASIC1.73□□□□□ -2.13
CLPTM1O96005 RNU6-505P-201ENST00000384427 107 ntBASIC1.73□□□□□ -2.13
CLPTM1O96005 RNU11-3P-201ENST00000391111 133 ntBASIC1.73□□□□□ -2.13
CLPTM1O96005 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.73□□□□□ -2.13
CLPTM1O96005 HMGN2P3-201ENST00000433603 273 ntBASIC1.73□□□□□ -2.13
CLPTM1O96005 HMGN2P5-201ENST00000436882 273 ntBASIC1.73□□□□□ -2.13
CLPTM1O96005 SCARNA24.2-201ENST00000516968 130 ntBASIC1.73□□□□□ -2.13
CLPTM1O96005 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.73□□□□□ -2.13
CLPTM1O96005 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.73□□□□□ -2.13
CLPTM1O96005 MIR3149-201ENST00000584629 83 ntBASIC1.73□□□□□ -2.13
CLPTM1O96005 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.73□□□□□ -2.13
CLPTM1O96005 AC005828.6-201ENST00000606610 232 ntBASIC1.73□□□□□ -2.13
CLPTM1O96005 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.73□□□□□ -2.13
CLPTM1O96005 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.73□□□□□ -2.13
CLPTM1O96005 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CLPTM1O96005 AC010615.1-201ENST00000594254 1764 ntBASIC1.72□□□□□ -2.13
CLPTM1O96005 SNORA27.1-201ENST00000362604 124 ntBASIC1.72□□□□□ -2.13
CLPTM1O96005 SNORD114-1-201ENST00000362705 72 ntBASIC1.72□□□□□ -2.13
CLPTM1O96005 RNU6-862P-201ENST00000362804 105 ntBASIC1.72□□□□□ -2.13
CLPTM1O96005 Y_RNA.237-201ENST00000364439 102 ntBASIC1.72□□□□□ -2.13
CLPTM1O96005 RNA5SP363-201ENST00000365072 115 ntBASIC1.72□□□□□ -2.13
CLPTM1O96005 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.72□□□□□ -2.13
CLPTM1O96005 RNU2-38P-201ENST00000410856 79 ntBASIC1.72□□□□□ -2.13
CLPTM1O96005 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.72□□□□□ -2.13
CLPTM1O96005 HSPE1P21-201ENST00000438283 308 ntBASIC1.72□□□□□ -2.13
CLPTM1O96005 RPS27P22-201ENST00000478056 241 ntBASIC1.72□□□□□ -2.13
CLPTM1O96005 AC010409.1-201ENST00000487382 476 ntBASIC1.72□□□□□ -2.13
CLPTM1O96005 RNU6-1338P-201ENST00000516328 91 ntBASIC1.72□□□□□ -2.13
CLPTM1O96005 SUMO2P18-201ENST00000518873 252 ntBASIC1.72□□□□□ -2.13
CLPTM1O96005 DEFB122-202ENST00000569013 197 ntBASIC1.72□□□□□ -2.13
CLPTM1O96005 MIR4419B-201ENST00000577260 68 ntBASIC1.72□□□□□ -2.13
CLPTM1O96005 MIR338-201ENST00000636369 67 ntBASIC1.72□□□□□ -2.13
CLPTM1O96005 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CLPTM1O96005 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CLPTM1O96005 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CLPTM1O96005 Y_RNA.193-201ENST00000363979 102 ntBASIC1.71□□□□□ -2.14
CLPTM1O96005 Y_RNA.361-201ENST00000365515 120 ntBASIC1.71□□□□□ -2.14
CLPTM1O96005 Y_RNA.452-201ENST00000384202 108 ntBASIC1.71□□□□□ -2.14
CLPTM1O96005 SNORA8-201ENST00000384574 139 ntBASIC1.71□□□□□ -2.14
CLPTM1O96005 Y_RNA.569-201ENST00000384749 103 ntBASIC1.71□□□□□ -2.14
CLPTM1O96005 RNA5SP212-201ENST00000391223 107 ntBASIC1.71□□□□□ -2.14
CLPTM1O96005 MIR873-201ENST00000401120 77 ntBASIC1.71□□□□□ -2.14
CLPTM1O96005 AL117342.1-201ENST00000404861 406 ntBASIC1.71□□□□□ -2.14
CLPTM1O96005 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
CLPTM1O96005 AC099677.2-201ENST00000436385 175 ntBASIC1.71□□□□□ -2.14
CLPTM1O96005 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.71□□□□□ -2.14
CLPTM1O96005 snoU13.15-201ENST00000459407 104 ntBASIC1.71□□□□□ -2.14
CLPTM1O96005 snoU13.26-201ENST00000459452 105 ntBASIC1.71□□□□□ -2.14
CLPTM1O96005 UBL5P3-201ENST00000475112 231 ntBASIC1.71□□□□□ -2.14
CLPTM1O96005 AC010598.1-201ENST00000510378 103 ntBASIC1.71□□□□□ -2.14
CLPTM1O96005 Y_RNA.668-201ENST00000516233 93 ntBASIC1.71□□□□□ -2.14
CLPTM1O96005 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.71□□□□□ -2.14
CLPTM1O96005 RPL21P9-201ENST00000556149 474 ntBASIC1.71□□□□□ -2.14
CLPTM1O96005 U4.1-201ENST00000620349 87 ntBASIC1.71□□□□□ -2.14
CLPTM1O96005 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.71□□□□□ -2.14
CLPTM1O96005 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.71□□□□□ -2.14
CLPTM1O96005 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.71□□□□□ -2.14
CLPTM1O96005 RNA5SP467-201ENST00000391274 118 ntBASIC1.7□□□□□ -2.14
CLPTM1O96005 MTCO1P5-201ENST00000433573 344 ntBASIC1.7□□□□□ -2.14
CLPTM1O96005 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.7□□□□□ -2.14
CLPTM1O96005 RPS26P55-201ENST00000471178 356 ntBASIC1.7□□□□□ -2.14
CLPTM1O96005 RNA5SP20-201ENST00000515976 84 ntBASIC1.7□□□□□ -2.14
CLPTM1O96005 MIR3618-201ENST00000580330 88 ntBASIC1.7□□□□□ -2.14
CLPTM1O96005 MIR4285-201ENST00000581001 85 ntBASIC1.7□□□□□ -2.14
CLPTM1O96005 MIR4438-201ENST00000585271 93 ntBASIC1.7□□□□□ -2.14
CLPTM1O96005 AL353149.1-201ENST00000610667 244 ntBASIC1.7□□□□□ -2.14
CLPTM1O96005 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.7□□□□□ -2.14
CLPTM1O96005 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CLPTM1O96005 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CLPTM1O96005 AL356292.1-201ENST00000283110 373 ntBASIC1.69□□□□□ -2.14
CLPTM1O96005 SNORA25.1-201ENST00000362326 128 ntBASIC1.69□□□□□ -2.14
CLPTM1O96005 RNU1-96P-201ENST00000364163 162 ntBASIC1.69□□□□□ -2.14
CLPTM1O96005 Y_RNA.288-201ENST00000364854 92 ntBASIC1.69□□□□□ -2.14
CLPTM1O96005 RNU6-702P-201ENST00000364982 107 ntBASIC1.69□□□□□ -2.14
CLPTM1O96005 SNORA53-201ENST00000391141 249 ntBASIC1.69□□□□□ -2.14
CLPTM1O96005 RNA5SP465-201ENST00000391195 109 ntBASIC1.69□□□□□ -2.14
CLPTM1O96005 RNU6-1186P-201ENST00000410429 97 ntBASIC1.69□□□□□ -2.14
CLPTM1O96005 RNU2-61P-201ENST00000411069 191 ntBASIC1.69□□□□□ -2.14
CLPTM1O96005 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.69□□□□□ -2.14
CLPTM1O96005 AC008834.1-201ENST00000511612 175 ntBASIC1.69□□□□□ -2.14
CLPTM1O96005 SERF1AP1-201ENST00000514575 187 ntBASIC1.69□□□□□ -2.14
CLPTM1O96005 RNU6-1146P-201ENST00000516282 102 ntBASIC1.69□□□□□ -2.14
CLPTM1O96005 RNU6-63P-201ENST00000516690 95 ntBASIC1.69□□□□□ -2.14
CLPTM1O96005 RNU2-31P-201ENST00000516954 155 ntBASIC1.69□□□□□ -2.14
CLPTM1O96005 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.69□□□□□ -2.14
CLPTM1O96005 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.69□□□□□ -2.14
CLPTM1O96005 AC005786.1-201ENST00000588553 154 ntBASIC1.69□□□□□ -2.14
CLPTM1O96005 U6.104-201ENST00000637979 90 ntBASIC1.69□□□□□ -2.14
CLPTM1O96005 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CLPTM1O96005 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.69□□□□□ -2.14
CLPTM1O96005 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.68□□□□□ -2.14
CLPTM1O96005 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.68□□□□□ -2.14
CLPTM1O96005 AL391987.6-201ENST00000305671 199 ntBASIC1.68□□□□□ -2.14
CLPTM1O96005 Y_RNA.172-201ENST00000363765 102 ntBASIC1.68□□□□□ -2.14
CLPTM1O96005 RNU6-271P-201ENST00000363858 105 ntBASIC1.68□□□□□ -2.14
CLPTM1O96005 SNORD116-13-201ENST00000384408 92 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms