Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 U2.3-201ENST00000617785 191 ntBASIC2.41□□□□□ -2.02
TOP3BO95985 U2.19-201ENST00000618602 191 ntBASIC2.41□□□□□ -2.02
TOP3BO95985 RNU2-1-201ENST00000618664 191 ntBASIC2.41□□□□□ -2.02
TOP3BO95985 U2.6-201ENST00000619225 191 ntBASIC2.41□□□□□ -2.02
TOP3BO95985 U2.5-201ENST00000619465 191 ntBASIC2.41□□□□□ -2.02
TOP3BO95985 U2.10-201ENST00000620268 191 ntBASIC2.41□□□□□ -2.02
TOP3BO95985 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.41□□□□□ -2.02
TOP3BO95985 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
TOP3BO95985 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
TOP3BO95985 RNU6-801P-201ENST00000364087 105 ntBASIC2.4□□□□□ -2.03
TOP3BO95985 SNORD32B-201ENST00000364460 84 ntBASIC2.4□□□□□ -2.03
TOP3BO95985 RNU1-91P-201ENST00000364746 163 ntBASIC2.4□□□□□ -2.03
TOP3BO95985 RNU6-1130P-201ENST00000365434 107 ntBASIC2.4□□□□□ -2.03
TOP3BO95985 SNORD116-18-201ENST00000383961 92 ntBASIC2.4□□□□□ -2.03
TOP3BO95985 SNORA67.2-201ENST00000384300 149 ntBASIC2.4□□□□□ -2.03
TOP3BO95985 Y_RNA.508-201ENST00000384502 114 ntBASIC2.4□□□□□ -2.03
TOP3BO95985 RNU6-220P-201ENST00000390919 107 ntBASIC2.4□□□□□ -2.03
TOP3BO95985 Y_RNA.580-201ENST00000391004 95 ntBASIC2.4□□□□□ -2.03
TOP3BO95985 AC104389.3-201ENST00000445629 235 ntBASIC2.4□□□□□ -2.03
TOP3BO95985 CYP2C59P-201ENST00000457790 269 ntBASIC2.4□□□□□ -2.03
TOP3BO95985 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.4□□□□□ -2.03
TOP3BO95985 RNA5SP445-201ENST00000515889 115 ntBASIC2.4□□□□□ -2.03
TOP3BO95985 SNORA31.11-201ENST00000516528 139 ntBASIC2.4□□□□□ -2.03
TOP3BO95985 RNU1-104P-201ENST00000517280 175 ntBASIC2.4□□□□□ -2.03
TOP3BO95985 AC136628.3-201ENST00000521868 290 ntBASIC2.4□□□□□ -2.03
TOP3BO95985 AC100767.1-201ENST00000528178 123 ntBASIC2.4□□□□□ -2.03
TOP3BO95985 AP000942.3-201ENST00000603702 160 ntBASIC2.4□□□□□ -2.03
TOP3BO95985 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
TOP3BO95985 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
TOP3BO95985 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
TOP3BO95985 Y_RNA.121-201ENST00000363309 113 ntBASIC2.39□□□□□ -2.03
TOP3BO95985 Y_RNA.243-201ENST00000364481 109 ntBASIC2.39□□□□□ -2.03
TOP3BO95985 Y_RNA.412-201ENST00000384001 104 ntBASIC2.39□□□□□ -2.03
TOP3BO95985 SNORA26.5-201ENST00000391215 123 ntBASIC2.39□□□□□ -2.03
TOP3BO95985 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
TOP3BO95985 AL161788.1-201ENST00000441805 169 ntBASIC2.39□□□□□ -2.03
TOP3BO95985 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.39□□□□□ -2.03
TOP3BO95985 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.39□□□□□ -2.03
TOP3BO95985 MIR4781-201ENST00000585250 76 ntBASIC2.39□□□□□ -2.03
TOP3BO95985 AP001485.1-201ENST00000604799 199 ntBASIC2.39□□□□□ -2.03
TOP3BO95985 AC008873.1-201ENST00000625051 138 ntBASIC2.39□□□□□ -2.03
TOP3BO95985 MTND1P7-201ENST00000632801 297 ntBASIC2.39□□□□□ -2.03
TOP3BO95985 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
TOP3BO95985 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.39□□□□□ -2.03
TOP3BO95985 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
TOP3BO95985 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.39□□□□□ -2.03
TOP3BO95985 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
TOP3BO95985 Y_RNA.75-201ENST00000362927 97 ntBASIC2.38□□□□□ -2.03
TOP3BO95985 U3.8-201ENST00000363675 217 ntBASIC2.38□□□□□ -2.03
TOP3BO95985 Y_RNA.182-201ENST00000363880 111 ntBASIC2.38□□□□□ -2.03
TOP3BO95985 RNU6-944P-201ENST00000364023 107 ntBASIC2.38□□□□□ -2.03
TOP3BO95985 RNU6-312P-201ENST00000364629 107 ntBASIC2.38□□□□□ -2.03
TOP3BO95985 MIR1294-201ENST00000408503 142 ntBASIC2.38□□□□□ -2.03
TOP3BO95985 RNU2-63P-201ENST00000410792 194 ntBASIC2.38□□□□□ -2.03
TOP3BO95985 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.38□□□□□ -2.03
TOP3BO95985 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.38□□□□□ -2.03
TOP3BO95985 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.38□□□□□ -2.03
TOP3BO95985 RPL17P51-201ENST00000605218 238 ntBASIC2.38□□□□□ -2.03
TOP3BO95985 AC013791.1-201ENST00000616619 62 ntBASIC2.38□□□□□ -2.03
TOP3BO95985 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
TOP3BO95985 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.38□□□□□ -2.03
TOP3BO95985 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.37□□□□□ -2.03
TOP3BO95985 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
TOP3BO95985 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
TOP3BO95985 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.37□□□□□ -2.03
TOP3BO95985 Y_RNA.23-201ENST00000362496 106 ntBASIC2.37□□□□□ -2.03
TOP3BO95985 Y_RNA.796-201ENST00000364268 102 ntBASIC2.37□□□□□ -2.03
TOP3BO95985 Y_RNA.287-201ENST00000364853 94 ntBASIC2.37□□□□□ -2.03
TOP3BO95985 Y_RNA.799-201ENST00000364992 102 ntBASIC2.37□□□□□ -2.03
TOP3BO95985 Y_RNA.361-201ENST00000365515 120 ntBASIC2.37□□□□□ -2.03
TOP3BO95985 RNU6-81P-201ENST00000365608 104 ntBASIC2.37□□□□□ -2.03
TOP3BO95985 SNORA80E-201ENST00000384744 137 ntBASIC2.37□□□□□ -2.03
TOP3BO95985 MIR548B-201ENST00000385247 97 ntBASIC2.37□□□□□ -2.03
TOP3BO95985 RNU6-381P-201ENST00000391259 108 ntBASIC2.37□□□□□ -2.03
TOP3BO95985 RNU6-710P-201ENST00000410424 105 ntBASIC2.37□□□□□ -2.03
TOP3BO95985 SEPT7P4-201ENST00000437076 306 ntBASIC2.37□□□□□ -2.03
TOP3BO95985 RNU6-1053P-201ENST00000515930 101 ntBASIC2.37□□□□□ -2.03
TOP3BO95985 AC021269.2-201ENST00000532318 330 ntBASIC2.37□□□□□ -2.03
TOP3BO95985 AL355297.2-201ENST00000604792 129 ntBASIC2.37□□□□□ -2.03
TOP3BO95985 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.37□□□□□ -2.03
TOP3BO95985 AC067747.1-201ENST00000608026 250 ntBASIC2.37□□□□□ -2.03
TOP3BO95985 U6.115-201ENST00000636045 103 ntBASIC2.37□□□□□ -2.03
TOP3BO95985 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
TOP3BO95985 AC068700.1-201ENST00000565862 3754 ntBASIC2.37□□□□□ -2.03
TOP3BO95985 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.36□□□□□ -2.03
TOP3BO95985 RNU6-1048P-201ENST00000364054 107 ntBASIC2.36□□□□□ -2.03
TOP3BO95985 RNU4-84P-201ENST00000364200 139 ntBASIC2.36□□□□□ -2.03
TOP3BO95985 SNORA67.1-201ENST00000364749 141 ntBASIC2.36□□□□□ -2.03
TOP3BO95985 RNU6-449P-201ENST00000383914 107 ntBASIC2.36□□□□□ -2.03
TOP3BO95985 SNORA72.4-201ENST00000384174 132 ntBASIC2.36□□□□□ -2.03
TOP3BO95985 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
TOP3BO95985 AL359511.1-201ENST00000402970 211 ntBASIC2.36□□□□□ -2.03
TOP3BO95985 RPS20P10-201ENST00000451209 253 ntBASIC2.36□□□□□ -2.03
TOP3BO95985 AC005840.1-201ENST00000498412 377 ntBASIC2.36□□□□□ -2.03
TOP3BO95985 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.36□□□□□ -2.03
TOP3BO95985 AC108729.3-201ENST00000513484 108 ntBASIC2.36□□□□□ -2.03
TOP3BO95985 MIR449C-201ENST00000516047 92 ntBASIC2.36□□□□□ -2.03
TOP3BO95985 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.36□□□□□ -2.03
TOP3BO95985 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.36□□□□□ -2.03
TOP3BO95985 AC016717.2-201ENST00000609089 5141 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms