Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 AC027279.3-201ENST00000625055 122 ntBASIC0.94□□□□□ -2.26
MBD3O95983 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
MBD3O95983 RNU6-454P-201ENST00000364292 107 ntBASIC0.93□□□□□ -2.26
MBD3O95983 Y_RNA.267-201ENST00000364679 109 ntBASIC0.93□□□□□ -2.26
MBD3O95983 SNORA80D-201ENST00000384488 135 ntBASIC0.93□□□□□ -2.26
MBD3O95983 RNU6-601P-201ENST00000384540 107 ntBASIC0.93□□□□□ -2.26
MBD3O95983 MIR146A-201ENST00000385201 99 ntBASIC0.93□□□□□ -2.26
MBD3O95983 MIR548F5-201ENST00000408421 86 ntBASIC0.93□□□□□ -2.26
MBD3O95983 MIR548F1-201ENST00000408667 84 ntBASIC0.93□□□□□ -2.26
MBD3O95983 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.93□□□□□ -2.26
MBD3O95983 RNU7-87P-201ENST00000459343 62 ntBASIC0.93□□□□□ -2.26
MBD3O95983 RNU6-625P-201ENST00000459412 107 ntBASIC0.93□□□□□ -2.26
MBD3O95983 AC092989.1-201ENST00000481235 277 ntBASIC0.93□□□□□ -2.26
MBD3O95983 RPL17P19-201ENST00000489069 552 ntBASIC0.93□□□□□ -2.26
MBD3O95983 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.93□□□□□ -2.26
MBD3O95983 AC005592.1-201ENST00000566527 1640 ntBASIC0.93□□□□□ -2.26
MBD3O95983 RNA5SP361-201ENST00000362686 118 ntBASIC0.92□□□□□ -2.26
MBD3O95983 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.92□□□□□ -2.26
MBD3O95983 MIR200A-201ENST00000384875 90 ntBASIC0.92□□□□□ -2.26
MBD3O95983 MIR1287-201ENST00000408492 90 ntBASIC0.92□□□□□ -2.26
MBD3O95983 POLR2J4-204ENST00000418424 324 ntBASIC0.92□□□□□ -2.26
MBD3O95983 AC063976.4-201ENST00000421971 163 ntBASIC0.92□□□□□ -2.26
MBD3O95983 AC002429.1-201ENST00000437672 148 ntBASIC0.92□□□□□ -2.26
MBD3O95983 Z98949.2-201ENST00000440996 144 ntBASIC0.92□□□□□ -2.26
MBD3O95983 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.92□□□□□ -2.26
MBD3O95983 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.92□□□□□ -2.26
MBD3O95983 SNORA40.9-201ENST00000515895 93 ntBASIC0.92□□□□□ -2.26
MBD3O95983 RNU6-358P-201ENST00000516564 75 ntBASIC0.92□□□□□ -2.26
MBD3O95983 AP002001.1-203ENST00000534002 267 ntBASIC0.92□□□□□ -2.26
MBD3O95983 AC080078.3-201ENST00000605407 463 ntBASIC0.92□□□□□ -2.26
MBD3O95983 AC009229.3-201ENST00000608056 282 ntBASIC0.92□□□□□ -2.26
MBD3O95983 AC004832.4-201ENST00000608952 331 ntBASIC0.92□□□□□ -2.26
MBD3O95983 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
MBD3O95983 AC007014.2-201ENST00000615581 479 ntBASIC0.92□□□□□ -2.26
MBD3O95983 AC092794.2-201ENST00000620933 563 ntBASIC0.92□□□□□ -2.26
MBD3O95983 Y_RNA.226-201ENST00000364337 114 ntBASIC0.91□□□□□ -2.26
MBD3O95983 SNORD114-24-201ENST00000365029 72 ntBASIC0.91□□□□□ -2.26
MBD3O95983 RNU1-36P-201ENST00000365130 165 ntBASIC0.91□□□□□ -2.26
MBD3O95983 Y_RNA.358-201ENST00000365491 99 ntBASIC0.91□□□□□ -2.26
MBD3O95983 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.91□□□□□ -2.26
MBD3O95983 U8.22-201ENST00000459141 133 ntBASIC0.91□□□□□ -2.26
MBD3O95983 AC022868.1-201ENST00000517767 391 ntBASIC0.91□□□□□ -2.26
MBD3O95983 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.91□□□□□ -2.26
MBD3O95983 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.91□□□□□ -2.26
MBD3O95983 AC060780.3-201ENST00000589464 80 ntBASIC0.91□□□□□ -2.26
MBD3O95983 AC080078.2-201ENST00000603766 501 ntBASIC0.91□□□□□ -2.26
MBD3O95983 PRELID3BP2-201ENST00000605362 201 ntBASIC0.91□□□□□ -2.26
MBD3O95983 PISRT1.1-201ENST00000616930 107 ntBASIC0.91□□□□□ -2.26
MBD3O95983 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
MBD3O95983 RNU6-1301P-201ENST00000362724 104 ntBASIC0.9□□□□□ -2.27
MBD3O95983 Y_RNA.224-201ENST00000364308 111 ntBASIC0.9□□□□□ -2.27
MBD3O95983 Y_RNA.269-201ENST00000364685 89 ntBASIC0.9□□□□□ -2.27
MBD3O95983 RNU6-53P-201ENST00000365367 106 ntBASIC0.9□□□□□ -2.27
MBD3O95983 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.9□□□□□ -2.27
MBD3O95983 FGF7P6-202ENST00000451282 293 ntBASIC0.9□□□□□ -2.27
MBD3O95983 LINC01399-202ENST00000458450 244 ntBASIC0.9□□□□□ -2.27
MBD3O95983 Y_RNA.655-201ENST00000515919 96 ntBASIC0.9□□□□□ -2.27
MBD3O95983 ACA64.5-201ENST00000516207 127 ntBASIC0.9□□□□□ -2.27
MBD3O95983 SCARNA16.2-201ENST00000516520 172 ntBASIC0.9□□□□□ -2.27
MBD3O95983 RNU6-1096P-201ENST00000517089 102 ntBASIC0.9□□□□□ -2.27
MBD3O95983 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.9□□□□□ -2.27
MBD3O95983 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.9□□□□□ -2.27
MBD3O95983 AC011712.1-201ENST00000588959 234 ntBASIC0.9□□□□□ -2.27
MBD3O95983 AL117336.2-201ENST00000602435 335 ntBASIC0.9□□□□□ -2.27
MBD3O95983 MIR8070-201ENST00000616510 88 ntBASIC0.9□□□□□ -2.27
MBD3O95983 AC073869.6-201ENST00000640656 341 ntBASIC0.9□□□□□ -2.27
MBD3O95983 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
MBD3O95983 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
MBD3O95983 Y_RNA.88-201ENST00000363029 99 ntBASIC0.89□□□□□ -2.27
MBD3O95983 RNU4-41P-201ENST00000364426 143 ntBASIC0.89□□□□□ -2.27
MBD3O95983 Y_RNA.363-201ENST00000365529 113 ntBASIC0.89□□□□□ -2.27
MBD3O95983 MIR891A-201ENST00000401237 79 ntBASIC0.89□□□□□ -2.27
MBD3O95983 MTND3P10-201ENST00000450967 341 ntBASIC0.89□□□□□ -2.27
MBD3O95983 COX6CP14-201ENST00000469580 174 ntBASIC0.89□□□□□ -2.27
MBD3O95983 CYCTP-201ENST00000504253 315 ntBASIC0.89□□□□□ -2.27
MBD3O95983 SNORA70.12-201ENST00000516084 153 ntBASIC0.89□□□□□ -2.27
MBD3O95983 RNU6-718P-201ENST00000516166 105 ntBASIC0.89□□□□□ -2.27
MBD3O95983 RNU6-1291P-201ENST00000516591 104 ntBASIC0.89□□□□□ -2.27
MBD3O95983 RNU2-12P-201ENST00000517216 168 ntBASIC0.89□□□□□ -2.27
MBD3O95983 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.89□□□□□ -2.27
MBD3O95983 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.89□□□□□ -2.27
MBD3O95983 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.89□□□□□ -2.27
MBD3O95983 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
MBD3O95983 Y_RNA.404-201ENST00000383978 102 ntBASIC0.88□□□□□ -2.27
MBD3O95983 Y_RNA.473-201ENST00000384333 102 ntBASIC0.88□□□□□ -2.27
MBD3O95983 SNORD12B-201ENST00000410433 91 ntBASIC0.88□□□□□ -2.27
MBD3O95983 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.88□□□□□ -2.27
MBD3O95983 AC092423.1-201ENST00000430165 186 ntBASIC0.88□□□□□ -2.27
MBD3O95983 AL353997.1-201ENST00000432936 108 ntBASIC0.88□□□□□ -2.27
MBD3O95983 AL162725.1-201ENST00000435405 301 ntBASIC0.88□□□□□ -2.27
MBD3O95983 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.88□□□□□ -2.27
MBD3O95983 AC093850.1-201ENST00000454121 251 ntBASIC0.88□□□□□ -2.27
MBD3O95983 RPL7P42-201ENST00000481005 679 ntBASIC0.88□□□□□ -2.27
MBD3O95983 RPS26P48-201ENST00000491713 339 ntBASIC0.88□□□□□ -2.27
MBD3O95983 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.88□□□□□ -2.27
MBD3O95983 MIR4762-201ENST00000585261 75 ntBASIC0.88□□□□□ -2.27
MBD3O95983 AL078603.1-201ENST00000603824 313 ntBASIC0.88□□□□□ -2.27
MBD3O95983 MIR6857-201ENST00000613267 93 ntBASIC0.88□□□□□ -2.27
MBD3O95983 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.88□□□□□ -2.27
MBD3O95983 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms