Protein–RNA interactions for Protein: O75818

RPP40, Ribonuclease P protein subunit p40, humanhuman

Known RBP Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40O75818 MIR5002-201ENST00000584713 97 ntBASIC2.13□□□□□ -2.07
RPP40O75818 AL359075.3-201ENST00000613288 217 ntBASIC2.13□□□□□ -2.07
RPP40O75818 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
RPP40O75818 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.13□□□□□ -2.07
RPP40O75818 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
RPP40O75818 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
RPP40O75818 Y_RNA.84-201ENST00000363011 104 ntBASIC2.12□□□□□ -2.07
RPP40O75818 Y_RNA.329-201ENST00000365209 107 ntBASIC2.12□□□□□ -2.07
RPP40O75818 RNU6-505P-201ENST00000384427 107 ntBASIC2.12□□□□□ -2.07
RPP40O75818 SNORA53-201ENST00000391141 249 ntBASIC2.12□□□□□ -2.07
RPP40O75818 RNU2-61P-201ENST00000411069 191 ntBASIC2.12□□□□□ -2.07
RPP40O75818 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
RPP40O75818 CYCSP49-201ENST00000420810 319 ntBASIC2.12□□□□□ -2.07
RPP40O75818 HSPE1P13-201ENST00000451143 297 ntBASIC2.12□□□□□ -2.07
RPP40O75818 AC097462.1-201ENST00000514125 324 ntBASIC2.12□□□□□ -2.07
RPP40O75818 RNU6-1053P-201ENST00000515930 101 ntBASIC2.12□□□□□ -2.07
RPP40O75818 AC023157.2-201ENST00000540596 141 ntBASIC2.12□□□□□ -2.07
RPP40O75818 MIR4498-201ENST00000577599 66 ntBASIC2.12□□□□□ -2.07
RPP40O75818 AC010615.1-201ENST00000594254 1764 ntBASIC2.11□□□□□ -2.07
RPP40O75818 Y_RNA.136-201ENST00000363444 102 ntBASIC2.11□□□□□ -2.07
RPP40O75818 Y_RNA.461-201ENST00000384263 103 ntBASIC2.11□□□□□ -2.07
RPP40O75818 Y_RNA.512-201ENST00000384518 102 ntBASIC2.11□□□□□ -2.07
RPP40O75818 Y_RNA.541-201ENST00000384640 113 ntBASIC2.11□□□□□ -2.07
RPP40O75818 Y_RNA.556-201ENST00000384677 113 ntBASIC2.11□□□□□ -2.07
RPP40O75818 MIR215-201ENST00000384858 110 ntBASIC2.11□□□□□ -2.07
RPP40O75818 RNU6-1248P-201ENST00000391096 64 ntBASIC2.11□□□□□ -2.07
RPP40O75818 RNU11-5P-201ENST00000391216 129 ntBASIC2.11□□□□□ -2.07
RPP40O75818 MIR1302-6-201ENST00000408466 90 ntBASIC2.11□□□□□ -2.07
RPP40O75818 RNA5SP501-201ENST00000410990 112 ntBASIC2.11□□□□□ -2.07
RPP40O75818 TRBVB-201ENST00000477100 408 ntBASIC2.11□□□□□ -2.07
RPP40O75818 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.11□□□□□ -2.07
RPP40O75818 AC037487.3-201ENST00000606668 112 ntBASIC2.11□□□□□ -2.07
RPP40O75818 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.11□□□□□ -2.07
RPP40O75818 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.11□□□□□ -2.07
RPP40O75818 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
RPP40O75818 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
RPP40O75818 AC008555.8-201ENST00000623602 2168 ntBASIC2.1□□□□□ -2.07
RPP40O75818 RNU1-22P-201ENST00000363334 158 ntBASIC2.1□□□□□ -2.07
RPP40O75818 Y_RNA.124-201ENST00000363339 93 ntBASIC2.1□□□□□ -2.07
RPP40O75818 Y_RNA.226-201ENST00000364337 114 ntBASIC2.1□□□□□ -2.07
RPP40O75818 Y_RNA.569-201ENST00000384749 103 ntBASIC2.1□□□□□ -2.07
RPP40O75818 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
RPP40O75818 RNA5SP323-201ENST00000391094 133 ntBASIC2.1□□□□□ -2.07
RPP40O75818 RNU6-1203P-201ENST00000410703 110 ntBASIC2.1□□□□□ -2.07
RPP40O75818 AC069257.2-201ENST00000441819 155 ntBASIC2.1□□□□□ -2.07
RPP40O75818 RNU6-1278P-201ENST00000516130 107 ntBASIC2.1□□□□□ -2.07
RPP40O75818 RNU7-99P-201ENST00000516271 62 ntBASIC2.1□□□□□ -2.07
RPP40O75818 RNU1-142P-201ENST00000516682 145 ntBASIC2.1□□□□□ -2.07
RPP40O75818 RNU6-570P-201ENST00000517051 105 ntBASIC2.1□□□□□ -2.07
RPP40O75818 MIR5094-201ENST00000578766 85 ntBASIC2.1□□□□□ -2.07
RPP40O75818 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
RPP40O75818 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
RPP40O75818 RNU6-1019P-201ENST00000364424 107 ntBASIC2.09□□□□□ -2.07
RPP40O75818 SNORA16B-201ENST00000364674 135 ntBASIC2.09□□□□□ -2.07
RPP40O75818 RNU6-326P-201ENST00000365480 107 ntBASIC2.09□□□□□ -2.07
RPP40O75818 Y_RNA.376-201ENST00000365638 108 ntBASIC2.09□□□□□ -2.07
RPP40O75818 MIR17-201ENST00000385012 84 ntBASIC2.09□□□□□ -2.07
RPP40O75818 RNA5SP467-201ENST00000391274 118 ntBASIC2.09□□□□□ -2.07
RPP40O75818 RNVU1-2-201ENST00000516326 135 ntBASIC2.09□□□□□ -2.07
RPP40O75818 MIR514B-201ENST00000516774 80 ntBASIC2.09□□□□□ -2.07
RPP40O75818 RNU2-31P-201ENST00000516954 155 ntBASIC2.09□□□□□ -2.07
RPP40O75818 RNU7-172P-201ENST00000517125 64 ntBASIC2.09□□□□□ -2.07
RPP40O75818 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.09□□□□□ -2.07
RPP40O75818 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.09□□□□□ -2.07
RPP40O75818 AL161670.1-201ENST00000554348 137 ntBASIC2.09□□□□□ -2.07
RPP40O75818 DEFB117-201ENST00000602356 141 ntBASIC2.09□□□□□ -2.07
RPP40O75818 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
RPP40O75818 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
RPP40O75818 ZNF355P-201ENST00000427301 3216 ntBASIC2.08□□□□□ -2.08
RPP40O75818 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
RPP40O75818 RNA5SP37-201ENST00000365420 130 ntBASIC2.08□□□□□ -2.08
RPP40O75818 RNU6-196P-201ENST00000384315 107 ntBASIC2.08□□□□□ -2.08
RPP40O75818 RNU2-2P-201ENST00000410396 191 ntBASIC2.08□□□□□ -2.08
RPP40O75818 RNU6-1186P-201ENST00000410429 97 ntBASIC2.08□□□□□ -2.08
RPP40O75818 EBAG9P1-201ENST00000418955 543 ntBASIC2.08□□□□□ -2.08
RPP40O75818 AL021397.1-201ENST00000451806 248 ntBASIC2.08□□□□□ -2.08
RPP40O75818 RPS26P45-201ENST00000471748 340 ntBASIC2.08□□□□□ -2.08
RPP40O75818 AC010409.1-201ENST00000487382 476 ntBASIC2.08□□□□□ -2.08
RPP40O75818 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.08□□□□□ -2.08
RPP40O75818 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.08□□□□□ -2.08
RPP40O75818 AL359851.1-201ENST00000569460 4997 ntBASIC2.07□□□□□ -2.08
RPP40O75818 SNORA33-201ENST00000363664 130 ntBASIC2.07□□□□□ -2.08
RPP40O75818 Y_RNA.418-201ENST00000384029 102 ntBASIC2.07□□□□□ -2.08
RPP40O75818 RNU6-514P-201ENST00000384208 107 ntBASIC2.07□□□□□ -2.08
RPP40O75818 Y_RNA.518-201ENST00000384552 113 ntBASIC2.07□□□□□ -2.08
RPP40O75818 SNORA8-201ENST00000384574 139 ntBASIC2.07□□□□□ -2.08
RPP40O75818 MIR568-201ENST00000385036 95 ntBASIC2.07□□□□□ -2.08
RPP40O75818 AC025033.1-201ENST00000463883 194 ntBASIC2.07□□□□□ -2.08
RPP40O75818 HMGN1P10-201ENST00000474557 553 ntBASIC2.07□□□□□ -2.08
RPP40O75818 RNU6-1338P-201ENST00000516328 91 ntBASIC2.07□□□□□ -2.08
RPP40O75818 RNU7-128P-201ENST00000517247 62 ntBASIC2.07□□□□□ -2.08
RPP40O75818 RPL21P9-201ENST00000556149 474 ntBASIC2.07□□□□□ -2.08
RPP40O75818 SUB1P4-201ENST00000566062 339 ntBASIC2.07□□□□□ -2.08
RPP40O75818 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.07□□□□□ -2.08
RPP40O75818 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.07□□□□□ -2.08
RPP40O75818 SNORA25.1-201ENST00000362326 128 ntBASIC2.06□□□□□ -2.08
RPP40O75818 Y_RNA.144-201ENST00000363521 113 ntBASIC2.06□□□□□ -2.08
RPP40O75818 RNA5SP160-201ENST00000364866 120 ntBASIC2.06□□□□□ -2.08
RPP40O75818 RNU6-117P-201ENST00000365415 107 ntBASIC2.06□□□□□ -2.08
RPP40O75818 RNU6-472P-201ENST00000384299 107 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms