Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 AP002004.2-201ENST00000531656 154 ntBASIC0.87□□□□□ -2.27
UPK3AO75631 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.87□□□□□ -2.27
UPK3AO75631 AC080078.2-201ENST00000603766 501 ntBASIC0.87□□□□□ -2.27
UPK3AO75631 AL357312.1-201ENST00000603879 298 ntBASIC0.87□□□□□ -2.27
UPK3AO75631 AC007014.2-201ENST00000615581 479 ntBASIC0.87□□□□□ -2.27
UPK3AO75631 PISRT1.1-201ENST00000616930 107 ntBASIC0.87□□□□□ -2.27
UPK3AO75631 U6.115-201ENST00000636045 103 ntBASIC0.87□□□□□ -2.27
UPK3AO75631 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
UPK3AO75631 Y_RNA.124-201ENST00000363339 93 ntBASIC0.86□□□□□ -2.27
UPK3AO75631 SNORD114-24-201ENST00000365029 72 ntBASIC0.86□□□□□ -2.27
UPK3AO75631 RNU6-136P-201ENST00000384663 107 ntBASIC0.86□□□□□ -2.27
UPK3AO75631 SNORD41-201ENST00000386967 70 ntBASIC0.86□□□□□ -2.27
UPK3AO75631 AL451046.2-201ENST00000403074 277 ntBASIC0.86□□□□□ -2.27
UPK3AO75631 RNA5SP475-201ENST00000410568 110 ntBASIC0.86□□□□□ -2.27
UPK3AO75631 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.86□□□□□ -2.27
UPK3AO75631 MTND1P34-201ENST00000438556 671 ntBASIC0.86□□□□□ -2.27
UPK3AO75631 AL137792.2-201ENST00000443484 235 ntBASIC0.86□□□□□ -2.27
UPK3AO75631 AC233266.1-201ENST00000454518 96 ntBASIC0.86□□□□□ -2.27
UPK3AO75631 RPL39P39-201ENST00000455840 151 ntBASIC0.86□□□□□ -2.27
UPK3AO75631 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.86□□□□□ -2.27
UPK3AO75631 AC069439.1-201ENST00000494739 167 ntBASIC0.86□□□□□ -2.27
UPK3AO75631 SNORA40.9-201ENST00000515895 93 ntBASIC0.86□□□□□ -2.27
UPK3AO75631 RNU6-1278P-201ENST00000516130 107 ntBASIC0.86□□□□□ -2.27
UPK3AO75631 RNU6-917P-201ENST00000516294 104 ntBASIC0.86□□□□□ -2.27
UPK3AO75631 SCARNA16.2-201ENST00000516520 172 ntBASIC0.86□□□□□ -2.27
UPK3AO75631 RN7SKP49-201ENST00000516675 260 ntBASIC0.86□□□□□ -2.27
UPK3AO75631 RNU7-28P-201ENST00000516759 62 ntBASIC0.86□□□□□ -2.27
UPK3AO75631 AP002001.1-203ENST00000534002 267 ntBASIC0.86□□□□□ -2.27
UPK3AO75631 AC090049.2-201ENST00000550377 109 ntBASIC0.86□□□□□ -2.27
UPK3AO75631 AC091178.2-201ENST00000584401 117 ntBASIC0.86□□□□□ -2.27
UPK3AO75631 AC242852.1-201ENST00000612151 96 ntBASIC0.86□□□□□ -2.27
UPK3AO75631 AC244015.1-201ENST00000622301 99 ntBASIC0.86□□□□□ -2.27
UPK3AO75631 MIR3674-201ENST00000636576 68 ntBASIC0.86□□□□□ -2.27
UPK3AO75631 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
UPK3AO75631 Y_RNA.88-201ENST00000363029 99 ntBASIC0.85□□□□□ -2.27
UPK3AO75631 Y_RNA.404-201ENST00000383978 102 ntBASIC0.85□□□□□ -2.27
UPK3AO75631 RNU6-318P-201ENST00000384283 103 ntBASIC0.85□□□□□ -2.27
UPK3AO75631 Y_RNA.482-201ENST00000384377 111 ntBASIC0.85□□□□□ -2.27
UPK3AO75631 MIR200A-201ENST00000384875 90 ntBASIC0.85□□□□□ -2.27
UPK3AO75631 MIR653-201ENST00000385279 96 ntBASIC0.85□□□□□ -2.27
UPK3AO75631 RNA5SP482-201ENST00000391269 118 ntBASIC0.85□□□□□ -2.27
UPK3AO75631 MIR873-201ENST00000401120 77 ntBASIC0.85□□□□□ -2.27
UPK3AO75631 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.85□□□□□ -2.27
UPK3AO75631 AC245047.7-201ENST00000440265 293 ntBASIC0.85□□□□□ -2.27
UPK3AO75631 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.85□□□□□ -2.27
UPK3AO75631 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.85□□□□□ -2.27
UPK3AO75631 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.85□□□□□ -2.27
UPK3AO75631 AC011712.1-201ENST00000588959 234 ntBASIC0.85□□□□□ -2.27
UPK3AO75631 AC068790.6-201ENST00000602558 258 ntBASIC0.85□□□□□ -2.27
UPK3AO75631 AC084782.3-201ENST00000612282 578 ntBASIC0.85□□□□□ -2.27
UPK3AO75631 MIR1244-1-201ENST00000612829 85 ntBASIC0.85□□□□□ -2.27
UPK3AO75631 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.85□□□□□ -2.27
UPK3AO75631 AC127459.3-201ENST00000624328 466 ntBASIC0.85□□□□□ -2.27
UPK3AO75631 MIR1244-3-201ENST00000635744 85 ntBASIC0.85□□□□□ -2.27
UPK3AO75631 MIR1244-2-201ENST00000636449 85 ntBASIC0.85□□□□□ -2.27
UPK3AO75631 MIR1244-4-202ENST00000636813 85 ntBASIC0.85□□□□□ -2.27
UPK3AO75631 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
UPK3AO75631 MIR96-201ENST00000362288 78 ntBASIC0.84□□□□□ -2.27
UPK3AO75631 RNU6-454P-201ENST00000364292 107 ntBASIC0.84□□□□□ -2.27
UPK3AO75631 RNU6-1187P-201ENST00000364771 110 ntBASIC0.84□□□□□ -2.27
UPK3AO75631 RNU1-36P-201ENST00000365130 165 ntBASIC0.84□□□□□ -2.27
UPK3AO75631 Y_RNA.339-201ENST00000365325 102 ntBASIC0.84□□□□□ -2.27
UPK3AO75631 RNU6-1080P-201ENST00000383982 107 ntBASIC0.84□□□□□ -2.27
UPK3AO75631 AC104332.1-201ENST00000440471 797 ntBASIC0.84□□□□□ -2.27
UPK3AO75631 AL049830.1-201ENST00000468034 425 ntBASIC0.84□□□□□ -2.27
UPK3AO75631 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.84□□□□□ -2.27
UPK3AO75631 RNU6-1096P-201ENST00000517089 102 ntBASIC0.84□□□□□ -2.27
UPK3AO75631 AC005899.2-201ENST00000584353 90 ntBASIC0.84□□□□□ -2.27
UPK3AO75631 AC060780.3-201ENST00000589464 80 ntBASIC0.84□□□□□ -2.27
UPK3AO75631 AC092794.2-201ENST00000620933 563 ntBASIC0.84□□□□□ -2.27
UPK3AO75631 MIR6734-201ENST00000621166 68 ntBASIC0.84□□□□□ -2.27
UPK3AO75631 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.84□□□□□ -2.28
UPK3AO75631 MIR410-201ENST00000362222 80 ntBASIC0.83□□□□□ -2.28
UPK3AO75631 Y_RNA.72-201ENST00000362894 103 ntBASIC0.83□□□□□ -2.28
UPK3AO75631 SNORD114-22-201ENST00000365423 72 ntBASIC0.83□□□□□ -2.28
UPK3AO75631 SNORA2.2-201ENST00000365473 135 ntBASIC0.83□□□□□ -2.28
UPK3AO75631 MIR520G-201ENST00000385064 90 ntBASIC0.83□□□□□ -2.28
UPK3AO75631 SNORA75.4-201ENST00000391278 119 ntBASIC0.83□□□□□ -2.28
UPK3AO75631 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.83□□□□□ -2.28
UPK3AO75631 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.83□□□□□ -2.28
UPK3AO75631 AC022493.2-201ENST00000506122 481 ntBASIC0.83□□□□□ -2.28
UPK3AO75631 RNU6-63P-201ENST00000516690 95 ntBASIC0.83□□□□□ -2.28
UPK3AO75631 RNU6-307P-201ENST00000516743 106 ntBASIC0.83□□□□□ -2.28
UPK3AO75631 SNORA4-201ENST00000584302 138 ntBASIC0.83□□□□□ -2.28
UPK3AO75631 AL117336.2-201ENST00000602435 335 ntBASIC0.83□□□□□ -2.28
UPK3AO75631 AL020996.3-201ENST00000606617 222 ntBASIC0.83□□□□□ -2.28
UPK3AO75631 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.83□□□□□ -2.28
UPK3AO75631 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.83□□□□□ -2.28
UPK3AO75631 RNY1P14-201ENST00000384426 108 ntBASIC0.82□□□□□ -2.28
UPK3AO75631 SNORA80D-201ENST00000384488 135 ntBASIC0.82□□□□□ -2.28
UPK3AO75631 SNORD12B-201ENST00000410433 91 ntBASIC0.82□□□□□ -2.28
UPK3AO75631 RNU2-64P-201ENST00000411315 191 ntBASIC0.82□□□□□ -2.28
UPK3AO75631 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.82□□□□□ -2.28
UPK3AO75631 AC114482.1-201ENST00000418010 247 ntBASIC0.82□□□□□ -2.28
UPK3AO75631 RPL39P28-201ENST00000465655 155 ntBASIC0.82□□□□□ -2.28
UPK3AO75631 RPL17P19-201ENST00000489069 552 ntBASIC0.82□□□□□ -2.28
UPK3AO75631 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.82□□□□□ -2.28
UPK3AO75631 SNORD79.1-201ENST00000516069 84 ntBASIC0.82□□□□□ -2.28
UPK3AO75631 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.82□□□□□ -2.28
UPK3AO75631 RNU6-358P-201ENST00000516564 75 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms