Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.78□□□□□ -1.96
FOXN1O15353 MIR3923-201ENST00000579521 83 ntBASIC2.78□□□□□ -1.96
FOXN1O15353 AL137847.3-201ENST00000611521 109 ntBASIC2.78□□□□□ -1.96
FOXN1O15353 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
FOXN1O15353 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.97
FOXN1O15353 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.77□□□□□ -1.97
FOXN1O15353 MIR21-201ENST00000362134 72 ntBASIC2.77□□□□□ -1.97
FOXN1O15353 RNU6-529P-201ENST00000363383 104 ntBASIC2.77□□□□□ -1.97
FOXN1O15353 Y_RNA.172-201ENST00000363765 102 ntBASIC2.77□□□□□ -1.97
FOXN1O15353 SNORD115-30-201ENST00000364117 82 ntBASIC2.77□□□□□ -1.97
FOXN1O15353 Y_RNA.287-201ENST00000364853 94 ntBASIC2.77□□□□□ -1.97
FOXN1O15353 Y_RNA.420-201ENST00000384043 110 ntBASIC2.77□□□□□ -1.97
FOXN1O15353 RNA5SP181-201ENST00000410246 98 ntBASIC2.77□□□□□ -1.97
FOXN1O15353 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
FOXN1O15353 AC104389.3-201ENST00000445629 235 ntBASIC2.77□□□□□ -1.97
FOXN1O15353 AC074290.1-201ENST00000448883 135 ntBASIC2.77□□□□□ -1.97
FOXN1O15353 AL391813.1-201ENST00000603098 260 ntBASIC2.77□□□□□ -1.97
FOXN1O15353 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
FOXN1O15353 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.76□□□□□ -1.97
FOXN1O15353 MIR6073-201ENST00000352083 89 ntBASIC2.76□□□□□ -1.97
FOXN1O15353 RNU6-199P-201ENST00000362954 107 ntBASIC2.76□□□□□ -1.97
FOXN1O15353 RNA5SP456-201ENST00000364002 114 ntBASIC2.76□□□□□ -1.97
FOXN1O15353 RNU1-51P-201ENST00000365345 176 ntBASIC2.76□□□□□ -1.97
FOXN1O15353 MIR539-201ENST00000365690 78 ntBASIC2.76□□□□□ -1.97
FOXN1O15353 SNORA72.4-201ENST00000384174 132 ntBASIC2.76□□□□□ -1.97
FOXN1O15353 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
FOXN1O15353 AC006461.1-201ENST00000412637 326 ntBASIC2.76□□□□□ -1.97
FOXN1O15353 BTF3P4-201ENST00000418852 495 ntBASIC2.76□□□□□ -1.97
FOXN1O15353 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
FOXN1O15353 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.76□□□□□ -1.97
FOXN1O15353 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.76□□□□□ -1.97
FOXN1O15353 RNU6-1007P-201ENST00000516586 107 ntBASIC2.76□□□□□ -1.97
FOXN1O15353 AC112693.2-201ENST00000556538 232 ntBASIC2.76□□□□□ -1.97
FOXN1O15353 HMGN2P15-201ENST00000585707 270 ntBASIC2.76□□□□□ -1.97
FOXN1O15353 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.76□□□□□ -1.97
FOXN1O15353 MIR3199-2-201ENST00000636243 86 ntBASIC2.76□□□□□ -1.97
FOXN1O15353 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.76□□□□□ -1.97
FOXN1O15353 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.76□□□□□ -1.97
FOXN1O15353 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
FOXN1O15353 Y_RNA.337-201ENST00000365312 102 ntBASIC2.75□□□□□ -1.97
FOXN1O15353 RNU6-969P-201ENST00000383900 105 ntBASIC2.75□□□□□ -1.97
FOXN1O15353 RNU6-376P-201ENST00000384731 106 ntBASIC2.75□□□□□ -1.97
FOXN1O15353 RNA5SP504-201ENST00000410676 117 ntBASIC2.75□□□□□ -1.97
FOXN1O15353 CYCSP48-201ENST00000417124 323 ntBASIC2.75□□□□□ -1.97
FOXN1O15353 AC027124.2-201ENST00000428249 105 ntBASIC2.75□□□□□ -1.97
FOXN1O15353 AL161651.1-201ENST00000440882 223 ntBASIC2.75□□□□□ -1.97
FOXN1O15353 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.75□□□□□ -1.97
FOXN1O15353 AC245047.8-201ENST00000456455 284 ntBASIC2.75□□□□□ -1.97
FOXN1O15353 RNU7-197P-201ENST00000458836 62 ntBASIC2.75□□□□□ -1.97
FOXN1O15353 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.75□□□□□ -1.97
FOXN1O15353 AL034555.1-201ENST00000604816 211 ntBASIC2.75□□□□□ -1.97
FOXN1O15353 PCGEM1.1-201ENST00000613431 131 ntBASIC2.75□□□□□ -1.97
FOXN1O15353 Y_RNA.802-201ENST00000614892 130 ntBASIC2.75□□□□□ -1.97
FOXN1O15353 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.75□□□□□ -1.97
FOXN1O15353 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
FOXN1O15353 AC026241.1-201ENST00000517873 2142 ntBASIC2.75□□□□□ -1.97
FOXN1O15353 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
FOXN1O15353 Y_RNA.243-201ENST00000364481 109 ntBASIC2.74□□□□□ -1.97
FOXN1O15353 RNU6-80P-201ENST00000384195 107 ntBASIC2.74□□□□□ -1.97
FOXN1O15353 MIR616-201ENST00000385293 97 ntBASIC2.74□□□□□ -1.97
FOXN1O15353 MT-TT-201ENST00000387460 66 ntBASIC2.74□□□□□ -1.97
FOXN1O15353 RNA5SP201-201ENST00000410316 124 ntBASIC2.74□□□□□ -1.97
FOXN1O15353 AC023141.4-201ENST00000412031 328 ntBASIC2.74□□□□□ -1.97
FOXN1O15353 AC004386.2-201ENST00000441858 148 ntBASIC2.74□□□□□ -1.97
FOXN1O15353 AC026436.1-201ENST00000510537 270 ntBASIC2.74□□□□□ -1.97
FOXN1O15353 RNU4-57P-201ENST00000515980 135 ntBASIC2.74□□□□□ -1.97
FOXN1O15353 RNU1-117P-201ENST00000517041 158 ntBASIC2.74□□□□□ -1.97
FOXN1O15353 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.74□□□□□ -1.97
FOXN1O15353 AC105137.2-201ENST00000569073 466 ntBASIC2.74□□□□□ -1.97
FOXN1O15353 SNORD11B-201ENST00000607707 90 ntBASIC2.74□□□□□ -1.97
FOXN1O15353 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
FOXN1O15353 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
FOXN1O15353 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
FOXN1O15353 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
FOXN1O15353 ZNF702P-202ENST00000434269 1966 ntBASIC2.73□□□□□ -1.97
FOXN1O15353 Y_RNA.310-201ENST00000365063 113 ntBASIC2.73□□□□□ -1.97
FOXN1O15353 RNU6-407P-201ENST00000365280 104 ntBASIC2.73□□□□□ -1.97
FOXN1O15353 Y_RNA.341-201ENST00000365341 102 ntBASIC2.73□□□□□ -1.97
FOXN1O15353 Y_RNA.368-201ENST00000365547 113 ntBASIC2.73□□□□□ -1.97
FOXN1O15353 SNORD37.2-201ENST00000391075 66 ntBASIC2.73□□□□□ -1.97
FOXN1O15353 RNU6-460P-201ENST00000391158 108 ntBASIC2.73□□□□□ -1.97
FOXN1O15353 RNU1-101P-201ENST00000391171 127 ntBASIC2.73□□□□□ -1.97
FOXN1O15353 AL355497.1-201ENST00000406262 551 ntBASIC2.73□□□□□ -1.97
FOXN1O15353 RNU6-855P-201ENST00000410395 104 ntBASIC2.73□□□□□ -1.97
FOXN1O15353 AC010154.1-201ENST00000425857 269 ntBASIC2.73□□□□□ -1.97
FOXN1O15353 RPL23AP58-201ENST00000440453 469 ntBASIC2.73□□□□□ -1.97
FOXN1O15353 AC009238.1-201ENST00000442165 424 ntBASIC2.73□□□□□ -1.97
FOXN1O15353 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.73□□□□□ -1.97
FOXN1O15353 AC009237.6-201ENST00000446969 424 ntBASIC2.73□□□□□ -1.97
FOXN1O15353 AL121914.1-201ENST00000450188 156 ntBASIC2.73□□□□□ -1.97
FOXN1O15353 RNU6-561P-201ENST00000516222 102 ntBASIC2.73□□□□□ -1.97
FOXN1O15353 RNU6-344P-201ENST00000516635 111 ntBASIC2.73□□□□□ -1.97
FOXN1O15353 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.73□□□□□ -1.97
FOXN1O15353 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.73□□□□□ -1.97
FOXN1O15353 AC011603.4-201ENST00000611325 277 ntBASIC2.73□□□□□ -1.97
FOXN1O15353 TCL6_2.1-201ENST00000615162 119 ntBASIC2.73□□□□□ -1.97
FOXN1O15353 MIR6779-201ENST00000617283 64 ntBASIC2.73□□□□□ -1.97
FOXN1O15353 AC005562.2-201ENST00000618264 111 ntBASIC2.73□□□□□ -1.97
FOXN1O15353 TUG1_4.1-201ENST00000619464 181 ntBASIC2.73□□□□□ -1.97
FOXN1O15353 AC068205.3-201ENST00000636385 468 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms