Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 MTCO1P44-201ENST00000441935 243 ntBASIC3.3□□□□□ -1.88
SOX1O00570 SNORD33.1-201ENST00000516213 88 ntBASIC3.3□□□□□ -1.88
SOX1O00570 RNU2-60P-201ENST00000517290 128 ntBASIC3.3□□□□□ -1.88
SOX1O00570 uc_338.25-201ENST00000613756 156 ntBASIC3.3□□□□□ -1.88
SOX1O00570 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.3□□□□□ -1.88
SOX1O00570 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.3□□□□□ -1.88
SOX1O00570 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SOX1O00570 AC080128.1-201ENST00000474389 1917 ntBASIC3.3□□□□□ -1.88
SOX1O00570 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SOX1O00570 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SOX1O00570 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SOX1O00570 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.29□□□□□ -1.88
SOX1O00570 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SOX1O00570 RNU6-147P-201ENST00000383983 107 ntBASIC3.29□□□□□ -1.88
SOX1O00570 SNORD116-21-201ENST00000384507 92 ntBASIC3.29□□□□□ -1.88
SOX1O00570 MIR624-201ENST00000385217 97 ntBASIC3.29□□□□□ -1.88
SOX1O00570 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SOX1O00570 AC087499.2-201ENST00000432861 149 ntBASIC3.29□□□□□ -1.88
SOX1O00570 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.29□□□□□ -1.88
SOX1O00570 RPS26P45-201ENST00000471748 340 ntBASIC3.29□□□□□ -1.88
SOX1O00570 SNORA4.4-201ENST00000515921 135 ntBASIC3.29□□□□□ -1.88
SOX1O00570 RNU6-365P-201ENST00000517113 106 ntBASIC3.29□□□□□ -1.88
SOX1O00570 NDUFA5P6-201ENST00000542110 379 ntBASIC3.29□□□□□ -1.88
SOX1O00570 AC091178.2-201ENST00000584401 117 ntBASIC3.29□□□□□ -1.88
SOX1O00570 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.29□□□□□ -1.88
SOX1O00570 JPX_2.1-201ENST00000614161 69 ntBASIC3.29□□□□□ -1.88
SOX1O00570 AC244205.2-202ENST00000635781 342 ntBASIC3.29□□□□□ -1.88
SOX1O00570 MIR7157-201ENST00000635801 60 ntBASIC3.29□□□□□ -1.88
SOX1O00570 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SOX1O00570 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SOX1O00570 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SOX1O00570 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SOX1O00570 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SOX1O00570 Y_RNA.346-201ENST00000365385 112 ntBASIC3.28□□□□□ -1.88
SOX1O00570 Y_RNA.486-201ENST00000384398 107 ntBASIC3.28□□□□□ -1.88
SOX1O00570 AL138878.1-201ENST00000405131 347 ntBASIC3.28□□□□□ -1.88
SOX1O00570 RNA5SP127-201ENST00000411051 133 ntBASIC3.28□□□□□ -1.88
SOX1O00570 RNU2-32P-201ENST00000411193 191 ntBASIC3.28□□□□□ -1.88
SOX1O00570 AL357552.1-201ENST00000445254 415 ntBASIC3.28□□□□□ -1.88
SOX1O00570 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.28□□□□□ -1.88
SOX1O00570 SCGB1D5P-201ENST00000515134 247 ntBASIC3.28□□□□□ -1.88
SOX1O00570 SNORD59.2-201ENST00000516873 68 ntBASIC3.28□□□□□ -1.88
SOX1O00570 SCARNA3-201ENST00000517097 143 ntBASIC3.28□□□□□ -1.88
SOX1O00570 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.28□□□□□ -1.88
SOX1O00570 uc_338.1-201ENST00000612113 180 ntBASIC3.28□□□□□ -1.88
SOX1O00570 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.28□□□□□ -1.88
SOX1O00570 U6.73-201ENST00000619194 103 ntBASIC3.28□□□□□ -1.88
SOX1O00570 MIR5739-201ENST00000619803 80 ntBASIC3.28□□□□□ -1.88
SOX1O00570 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SOX1O00570 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
SOX1O00570 AC068647.1-201ENST00000489539 2265 ntBASIC3.28□□□□□ -1.88
SOX1O00570 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SOX1O00570 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SOX1O00570 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SOX1O00570 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.27□□□□□ -1.89
SOX1O00570 RNU6-1255P-201ENST00000363434 112 ntBASIC3.27□□□□□ -1.89
SOX1O00570 RNA5SP139-201ENST00000364340 117 ntBASIC3.27□□□□□ -1.89
SOX1O00570 MIR1253-201ENST00000408273 105 ntBASIC3.27□□□□□ -1.89
SOX1O00570 MTATP6P21-201ENST00000440681 189 ntBASIC3.27□□□□□ -1.89
SOX1O00570 RNU7-170P-201ENST00000459303 61 ntBASIC3.27□□□□□ -1.89
SOX1O00570 RN7SKP19-201ENST00000516016 252 ntBASIC3.27□□□□□ -1.89
SOX1O00570 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.27□□□□□ -1.89
SOX1O00570 AL365205.2-201ENST00000594586 68 ntBASIC3.27□□□□□ -1.89
SOX1O00570 U2.20-201ENST00000613956 192 ntBASIC3.27□□□□□ -1.89
SOX1O00570 AL121890.5-201ENST00000620848 304 ntBASIC3.27□□□□□ -1.89
SOX1O00570 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SOX1O00570 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SOX1O00570 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SOX1O00570 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SOX1O00570 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SOX1O00570 Y_RNA.52-201ENST00000362760 96 ntBASIC3.26□□□□□ -1.89
SOX1O00570 Y_RNA.309-201ENST00000365046 111 ntBASIC3.26□□□□□ -1.89
SOX1O00570 MIR520G-201ENST00000385064 90 ntBASIC3.26□□□□□ -1.89
SOX1O00570 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.26□□□□□ -1.89
SOX1O00570 MIR891A-201ENST00000401237 79 ntBASIC3.26□□□□□ -1.89
SOX1O00570 RNU6-1328P-201ENST00000410938 106 ntBASIC3.26□□□□□ -1.89
SOX1O00570 AC123900.1-201ENST00000420390 96 ntBASIC3.26□□□□□ -1.89
SOX1O00570 AL159169.1-201ENST00000421119 127 ntBASIC3.26□□□□□ -1.89
SOX1O00570 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.26□□□□□ -1.89
SOX1O00570 AC093259.1-201ENST00000509755 300 ntBASIC3.26□□□□□ -1.89
SOX1O00570 RNU6-504P-201ENST00000516568 104 ntBASIC3.26□□□□□ -1.89
SOX1O00570 AC002064.3-201ENST00000623448 346 ntBASIC3.26□□□□□ -1.89
SOX1O00570 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.26□□□□□ -1.89
SOX1O00570 MIR7515-201ENST00000637837 67 ntBASIC3.26□□□□□ -1.89
SOX1O00570 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SOX1O00570 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.25□□□□□ -1.89
SOX1O00570 Y_RNA.35-201ENST00000362601 101 ntBASIC3.25□□□□□ -1.89
SOX1O00570 Y_RNA.118-201ENST00000363300 101 ntBASIC3.25□□□□□ -1.89
SOX1O00570 MIR218-1-201ENST00000384999 110 ntBASIC3.25□□□□□ -1.89
SOX1O00570 RNU11-5P-201ENST00000391216 129 ntBASIC3.25□□□□□ -1.89
SOX1O00570 AC006989.1-201ENST00000427212 131 ntBASIC3.25□□□□□ -1.89
SOX1O00570 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.25□□□□□ -1.89
SOX1O00570 RNU6-1096P-201ENST00000517089 102 ntBASIC3.25□□□□□ -1.89
SOX1O00570 RNU1-104P-201ENST00000517280 175 ntBASIC3.25□□□□□ -1.89
SOX1O00570 AC107016.2-201ENST00000547968 190 ntBASIC3.25□□□□□ -1.89
SOX1O00570 PRELID2P1-201ENST00000552837 301 ntBASIC3.25□□□□□ -1.89
SOX1O00570 AL022345.2-201ENST00000606307 135 ntBASIC3.25□□□□□ -1.89
SOX1O00570 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.25□□□□□ -1.89
SOX1O00570 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
SOX1O00570 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms