Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 RPL21P1-201ENST00000399532 476 ntBASIC1.56□□□□□ -2.16
TRIM49BA6NDI0 AL590004.1-201ENST00000405321 300 ntBASIC1.56□□□□□ -2.16
TRIM49BA6NDI0 MIR548F4-201ENST00000408515 105 ntBASIC1.56□□□□□ -2.16
TRIM49BA6NDI0 MIR1185-2-201ENST00000408687 86 ntBASIC1.56□□□□□ -2.16
TRIM49BA6NDI0 RNU6-101P-201ENST00000410323 104 ntBASIC1.56□□□□□ -2.16
TRIM49BA6NDI0 SDAD1P3-201ENST00000427380 333 ntBASIC1.56□□□□□ -2.16
TRIM49BA6NDI0 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.56□□□□□ -2.16
TRIM49BA6NDI0 RNU6-475P-201ENST00000516073 104 ntBASIC1.56□□□□□ -2.16
TRIM49BA6NDI0 RNU6-327P-201ENST00000516270 127 ntBASIC1.56□□□□□ -2.16
TRIM49BA6NDI0 RNU6-1198P-201ENST00000516904 67 ntBASIC1.56□□□□□ -2.16
TRIM49BA6NDI0 RNU6-856P-201ENST00000516959 98 ntBASIC1.56□□□□□ -2.16
TRIM49BA6NDI0 SNORA31.24-201ENST00000517232 57 ntBASIC1.56□□□□□ -2.16
TRIM49BA6NDI0 MIR4422-201ENST00000581938 83 ntBASIC1.56□□□□□ -2.16
TRIM49BA6NDI0 snoU13.31-201ENST00000607291 104 ntBASIC1.56□□□□□ -2.16
TRIM49BA6NDI0 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.55□□□□□ -2.16
TRIM49BA6NDI0 Y_RNA.16-201ENST00000362421 102 ntBASIC1.55□□□□□ -2.16
TRIM49BA6NDI0 RNU6-1309P-201ENST00000363305 108 ntBASIC1.55□□□□□ -2.16
TRIM49BA6NDI0 RNU6-238P-201ENST00000363313 106 ntBASIC1.55□□□□□ -2.16
TRIM49BA6NDI0 RNU6-112P-201ENST00000363599 104 ntBASIC1.55□□□□□ -2.16
TRIM49BA6NDI0 Y_RNA.164-201ENST00000363709 102 ntBASIC1.55□□□□□ -2.16
TRIM49BA6NDI0 MIR568-201ENST00000385036 95 ntBASIC1.55□□□□□ -2.16
TRIM49BA6NDI0 AL117342.1-201ENST00000404861 406 ntBASIC1.55□□□□□ -2.16
TRIM49BA6NDI0 MIR1252-201ENST00000408861 65 ntBASIC1.55□□□□□ -2.16
TRIM49BA6NDI0 Y_RNA.602-201ENST00000410535 92 ntBASIC1.55□□□□□ -2.16
TRIM49BA6NDI0 HMGN2P34-201ENST00000437647 269 ntBASIC1.55□□□□□ -2.16
TRIM49BA6NDI0 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.55□□□□□ -2.16
TRIM49BA6NDI0 RNU6-1053P-201ENST00000515930 101 ntBASIC1.55□□□□□ -2.16
TRIM49BA6NDI0 Y_RNA.720-201ENST00000517166 92 ntBASIC1.55□□□□□ -2.16
TRIM49BA6NDI0 AC025647.1-201ENST00000517879 253 ntBASIC1.55□□□□□ -2.16
TRIM49BA6NDI0 AC023157.2-201ENST00000540596 141 ntBASIC1.55□□□□□ -2.16
TRIM49BA6NDI0 MIR4300-201ENST00000581016 96 ntBASIC1.55□□□□□ -2.16
TRIM49BA6NDI0 RPS29P30-201ENST00000600975 111 ntBASIC1.55□□□□□ -2.16
TRIM49BA6NDI0 snoZ196.1-201ENST00000625269 89 ntBASIC1.55□□□□□ -2.16
TRIM49BA6NDI0 MIR3674-201ENST00000636576 68 ntBASIC1.55□□□□□ -2.16
TRIM49BA6NDI0 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
TRIM49BA6NDI0 AL159152.1-201ENST00000635019 2587 ntBASIC1.55□□□□□ -2.16
TRIM49BA6NDI0 WWP1P1-201ENST00000466609 2769 ntBASIC1.55□□□□□ -2.16
TRIM49BA6NDI0 AP000648.3-201ENST00000623539 4507 ntBASIC1.55□□□□□ -2.16
TRIM49BA6NDI0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
TRIM49BA6NDI0 RNU6-862P-201ENST00000362804 105 ntBASIC1.54□□□□□ -2.16
TRIM49BA6NDI0 snoU2_19.2-201ENST00000363024 80 ntBASIC1.54□□□□□ -2.16
TRIM49BA6NDI0 Y_RNA.162-201ENST00000363683 102 ntBASIC1.54□□□□□ -2.16
TRIM49BA6NDI0 RNU6-1175P-201ENST00000365200 107 ntBASIC1.54□□□□□ -2.16
TRIM49BA6NDI0 RNU6-1264P-201ENST00000383891 107 ntBASIC1.54□□□□□ -2.16
TRIM49BA6NDI0 RNU6-439P-201ENST00000384188 106 ntBASIC1.54□□□□□ -2.16
TRIM49BA6NDI0 RNU6-417P-201ENST00000384712 107 ntBASIC1.54□□□□□ -2.16
TRIM49BA6NDI0 RNU6-997P-201ENST00000384725 107 ntBASIC1.54□□□□□ -2.16
TRIM49BA6NDI0 Y_RNA.570-201ENST00000384750 101 ntBASIC1.54□□□□□ -2.16
TRIM49BA6NDI0 RNA5SP467-201ENST00000391274 118 ntBASIC1.54□□□□□ -2.16
TRIM49BA6NDI0 MIR1267-201ENST00000408723 78 ntBASIC1.54□□□□□ -2.16
TRIM49BA6NDI0 AP1B1P2-201ENST00000416196 106 ntBASIC1.54□□□□□ -2.16
TRIM49BA6NDI0 FTH1P12-201ENST00000432137 551 ntBASIC1.54□□□□□ -2.16
TRIM49BA6NDI0 AL135790.2-201ENST00000437701 267 ntBASIC1.54□□□□□ -2.16
TRIM49BA6NDI0 SNRPGP13-201ENST00000442212 177 ntBASIC1.54□□□□□ -2.16
TRIM49BA6NDI0 AL606517.2-201ENST00000442855 241 ntBASIC1.54□□□□□ -2.16
TRIM49BA6NDI0 AL357134.1-201ENST00000445848 426 ntBASIC1.54□□□□□ -2.16
TRIM49BA6NDI0 RPS29P29-201ENST00000456396 171 ntBASIC1.54□□□□□ -2.16
TRIM49BA6NDI0 LINC01399-202ENST00000458450 244 ntBASIC1.54□□□□□ -2.16
TRIM49BA6NDI0 RNU6-221P-201ENST00000459541 99 ntBASIC1.54□□□□□ -2.16
TRIM49BA6NDI0 RPL36AP21-201ENST00000490372 323 ntBASIC1.54□□□□□ -2.16
TRIM49BA6NDI0 RNY3P15-201ENST00000516297 97 ntBASIC1.54□□□□□ -2.16
TRIM49BA6NDI0 Y_RNA.721-201ENST00000517207 102 ntBASIC1.54□□□□□ -2.16
TRIM49BA6NDI0 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.54□□□□□ -2.16
TRIM49BA6NDI0 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.54□□□□□ -2.16
TRIM49BA6NDI0 AC069114.2-201ENST00000604699 304 ntBASIC1.54□□□□□ -2.16
TRIM49BA6NDI0 U3.8-201ENST00000363675 217 ntBASIC1.53□□□□□ -2.16
TRIM49BA6NDI0 RNU4-50P-201ENST00000364361 141 ntBASIC1.53□□□□□ -2.16
TRIM49BA6NDI0 Y_RNA.238-201ENST00000364441 102 ntBASIC1.53□□□□□ -2.16
TRIM49BA6NDI0 Y_RNA.446-201ENST00000384178 104 ntBASIC1.53□□□□□ -2.16
TRIM49BA6NDI0 Y_RNA.459-201ENST00000384251 102 ntBASIC1.53□□□□□ -2.16
TRIM49BA6NDI0 RNU6-1235P-201ENST00000384559 107 ntBASIC1.53□□□□□ -2.16
TRIM49BA6NDI0 MIR300-201ENST00000401138 83 ntBASIC1.53□□□□□ -2.16
TRIM49BA6NDI0 MRPL35P1-201ENST00000404272 572 ntBASIC1.53□□□□□ -2.16
TRIM49BA6NDI0 MIR320B2-201ENST00000408479 138 ntBASIC1.53□□□□□ -2.16
TRIM49BA6NDI0 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.53□□□□□ -2.16
TRIM49BA6NDI0 MTCO3P19-201ENST00000415864 321 ntBASIC1.53□□□□□ -2.16
TRIM49BA6NDI0 DYNLT3P2-201ENST00000442517 295 ntBASIC1.53□□□□□ -2.16
TRIM49BA6NDI0 MRPS10P1-201ENST00000448483 130 ntBASIC1.53□□□□□ -2.16
TRIM49BA6NDI0 ATP5J2P3-201ENST00000451550 258 ntBASIC1.53□□□□□ -2.16
TRIM49BA6NDI0 SNORD65B-201ENST00000459126 73 ntBASIC1.53□□□□□ -2.16
TRIM49BA6NDI0 RNU6-498P-201ENST00000459468 107 ntBASIC1.53□□□□□ -2.16
TRIM49BA6NDI0 AC011406.1-201ENST00000512440 370 ntBASIC1.53□□□□□ -2.16
TRIM49BA6NDI0 RNU6-635P-201ENST00000516651 102 ntBASIC1.53□□□□□ -2.16
TRIM49BA6NDI0 RNU6-63P-201ENST00000516690 95 ntBASIC1.53□□□□□ -2.16
TRIM49BA6NDI0 RNU6-570P-201ENST00000517051 105 ntBASIC1.53□□□□□ -2.16
TRIM49BA6NDI0 MIR2355-201ENST00000517199 87 ntBASIC1.53□□□□□ -2.16
TRIM49BA6NDI0 RNU2-12P-201ENST00000517216 168 ntBASIC1.53□□□□□ -2.16
TRIM49BA6NDI0 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.53□□□□□ -2.16
TRIM49BA6NDI0 AC022616.4-201ENST00000522985 181 ntBASIC1.53□□□□□ -2.16
TRIM49BA6NDI0 MIR4423-201ENST00000580922 80 ntBASIC1.53□□□□□ -2.16
TRIM49BA6NDI0 AC006504.6-201ENST00000590142 199 ntBASIC1.53□□□□□ -2.16
TRIM49BA6NDI0 AC005176.2-201ENST00000596933 147 ntBASIC1.53□□□□□ -2.16
TRIM49BA6NDI0 AC136443.5-201ENST00000603741 370 ntBASIC1.53□□□□□ -2.16
TRIM49BA6NDI0 AL121655.1-201ENST00000605811 308 ntBASIC1.53□□□□□ -2.16
TRIM49BA6NDI0 AC010205.1-201ENST00000616668 449 ntBASIC1.53□□□□□ -2.16
TRIM49BA6NDI0 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.53□□□□□ -2.16
TRIM49BA6NDI0 U6.115-201ENST00000636045 103 ntBASIC1.53□□□□□ -2.16
TRIM49BA6NDI0 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
TRIM49BA6NDI0 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
TRIM49BA6NDI0 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms