Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 U2.3-201ENST00000617785 191 ntBASIC2.23□□□□□ -2.05
TCRBV5S1A1TA0A578 U2.19-201ENST00000618602 191 ntBASIC2.23□□□□□ -2.05
TCRBV5S1A1TA0A578 RNU2-1-201ENST00000618664 191 ntBASIC2.23□□□□□ -2.05
TCRBV5S1A1TA0A578 U2.6-201ENST00000619225 191 ntBASIC2.23□□□□□ -2.05
TCRBV5S1A1TA0A578 U2.5-201ENST00000619465 191 ntBASIC2.23□□□□□ -2.05
TCRBV5S1A1TA0A578 U2.10-201ENST00000620268 191 ntBASIC2.23□□□□□ -2.05
TCRBV5S1A1TA0A578 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.23□□□□□ -2.05
TCRBV5S1A1TA0A578 U6.106-201ENST00000636360 105 ntBASIC2.23□□□□□ -2.05
TCRBV5S1A1TA0A578 AC068647.2-201ENST00000637380 353 ntBASIC2.23□□□□□ -2.05
TCRBV5S1A1TA0A578 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
TCRBV5S1A1TA0A578 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
TCRBV5S1A1TA0A578 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
TCRBV5S1A1TA0A578 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
TCRBV5S1A1TA0A578 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
TCRBV5S1A1TA0A578 AL356292.1-201ENST00000283110 373 ntBASIC2.22□□□□□ -2.05
TCRBV5S1A1TA0A578 Y_RNA.7-201ENST00000362352 102 ntBASIC2.22□□□□□ -2.05
TCRBV5S1A1TA0A578 Y_RNA.99-201ENST00000363138 105 ntBASIC2.22□□□□□ -2.05
TCRBV5S1A1TA0A578 RNU6-1205P-201ENST00000363625 106 ntBASIC2.22□□□□□ -2.05
TCRBV5S1A1TA0A578 SNORA8.3-201ENST00000384679 139 ntBASIC2.22□□□□□ -2.05
TCRBV5S1A1TA0A578 PCNPP3-201ENST00000393579 471 ntBASIC2.22□□□□□ -2.05
TCRBV5S1A1TA0A578 AL023284.1-201ENST00000403956 276 ntBASIC2.22□□□□□ -2.05
TCRBV5S1A1TA0A578 EDDM3CP-201ENST00000415977 425 ntBASIC2.22□□□□□ -2.05
TCRBV5S1A1TA0A578 AC060773.1-201ENST00000421698 310 ntBASIC2.22□□□□□ -2.05
TCRBV5S1A1TA0A578 UBE2DNL-203ENST00000474922 222 ntBASIC2.22□□□□□ -2.05
TCRBV5S1A1TA0A578 AC010409.1-201ENST00000487382 476 ntBASIC2.22□□□□□ -2.05
TCRBV5S1A1TA0A578 RNU6-56P-201ENST00000516986 93 ntBASIC2.22□□□□□ -2.05
TCRBV5S1A1TA0A578 SUMO2P18-201ENST00000518873 252 ntBASIC2.22□□□□□ -2.05
TCRBV5S1A1TA0A578 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.22□□□□□ -2.05
TCRBV5S1A1TA0A578 AC100767.1-201ENST00000528178 123 ntBASIC2.22□□□□□ -2.05
TCRBV5S1A1TA0A578 AL137100.2-201ENST00000555786 315 ntBASIC2.22□□□□□ -2.05
TCRBV5S1A1TA0A578 AC005972.2-201ENST00000604690 348 ntBASIC2.22□□□□□ -2.05
TCRBV5S1A1TA0A578 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
TCRBV5S1A1TA0A578 VTRNA1-1-201ENST00000363120 99 ntBASIC2.21□□□□□ -2.06
TCRBV5S1A1TA0A578 U8.7-201ENST00000364940 136 ntBASIC2.21□□□□□ -2.06
TCRBV5S1A1TA0A578 RNU4-17P-201ENST00000365598 141 ntBASIC2.21□□□□□ -2.06
TCRBV5S1A1TA0A578 RNU6-1323P-201ENST00000384025 107 ntBASIC2.21□□□□□ -2.06
TCRBV5S1A1TA0A578 Y_RNA.464-201ENST00000384282 110 ntBASIC2.21□□□□□ -2.06
TCRBV5S1A1TA0A578 SNORD116-13-201ENST00000384408 92 ntBASIC2.21□□□□□ -2.06
TCRBV5S1A1TA0A578 MIR626-201ENST00000385032 94 ntBASIC2.21□□□□□ -2.06
TCRBV5S1A1TA0A578 SNORA3.2-201ENST00000408221 125 ntBASIC2.21□□□□□ -2.06
TCRBV5S1A1TA0A578 AC117454.1-201ENST00000491120 168 ntBASIC2.21□□□□□ -2.06
TCRBV5S1A1TA0A578 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.21□□□□□ -2.06
TCRBV5S1A1TA0A578 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.21□□□□□ -2.06
TCRBV5S1A1TA0A578 RNU7-115P-201ENST00000516433 55 ntBASIC2.21□□□□□ -2.06
TCRBV5S1A1TA0A578 RNU7-116P-201ENST00000516940 62 ntBASIC2.21□□□□□ -2.06
TCRBV5S1A1TA0A578 MIR5688-201ENST00000580619 83 ntBASIC2.21□□□□□ -2.06
TCRBV5S1A1TA0A578 MIR4438-201ENST00000585271 93 ntBASIC2.21□□□□□ -2.06
TCRBV5S1A1TA0A578 AL365434.2-201ENST00000607979 234 ntBASIC2.21□□□□□ -2.06
TCRBV5S1A1TA0A578 AC004832.4-201ENST00000608952 331 ntBASIC2.21□□□□□ -2.06
TCRBV5S1A1TA0A578 Y_RNA.802-201ENST00000614892 130 ntBASIC2.21□□□□□ -2.06
TCRBV5S1A1TA0A578 MIR548AY-201ENST00000617669 107 ntBASIC2.21□□□□□ -2.06
TCRBV5S1A1TA0A578 MIR6132-201ENST00000622083 109 ntBASIC2.21□□□□□ -2.06
TCRBV5S1A1TA0A578 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.21□□□□□ -2.06
TCRBV5S1A1TA0A578 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
TCRBV5S1A1TA0A578 Y_RNA.121-201ENST00000363309 113 ntBASIC2.2□□□□□ -2.06
TCRBV5S1A1TA0A578 Y_RNA.238-201ENST00000364441 102 ntBASIC2.2□□□□□ -2.06
TCRBV5S1A1TA0A578 Y_RNA.240-201ENST00000364469 95 ntBASIC2.2□□□□□ -2.06
TCRBV5S1A1TA0A578 Y_RNA.571-201ENST00000384753 98 ntBASIC2.2□□□□□ -2.06
TCRBV5S1A1TA0A578 HMGN2P35-201ENST00000412164 270 ntBASIC2.2□□□□□ -2.06
TCRBV5S1A1TA0A578 AL356320.1-201ENST00000429616 163 ntBASIC2.2□□□□□ -2.06
TCRBV5S1A1TA0A578 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.2□□□□□ -2.06
TCRBV5S1A1TA0A578 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.2□□□□□ -2.06
TCRBV5S1A1TA0A578 AC245102.2-201ENST00000448956 180 ntBASIC2.2□□□□□ -2.06
TCRBV5S1A1TA0A578 RNU1-131P-201ENST00000458943 161 ntBASIC2.2□□□□□ -2.06
TCRBV5S1A1TA0A578 AC011406.1-201ENST00000512440 370 ntBASIC2.2□□□□□ -2.06
TCRBV5S1A1TA0A578 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.2□□□□□ -2.06
TCRBV5S1A1TA0A578 RNU6-1278P-201ENST00000516130 107 ntBASIC2.2□□□□□ -2.06
TCRBV5S1A1TA0A578 RNU6-63P-201ENST00000516690 95 ntBASIC2.2□□□□□ -2.06
TCRBV5S1A1TA0A578 SNORD53-201ENST00000579969 78 ntBASIC2.2□□□□□ -2.06
TCRBV5S1A1TA0A578 POLR3GP1-201ENST00000594073 261 ntBASIC2.2□□□□□ -2.06
TCRBV5S1A1TA0A578 AP003357.1-201ENST00000604497 148 ntBASIC2.2□□□□□ -2.06
TCRBV5S1A1TA0A578 AP000553.5-201ENST00000641933 54 ntBASIC2.2□□□□□ -2.06
TCRBV5S1A1TA0A578 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
TCRBV5S1A1TA0A578 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
TCRBV5S1A1TA0A578 RNU1-22P-201ENST00000363334 158 ntBASIC2.19□□□□□ -2.06
TCRBV5S1A1TA0A578 RNU4-13P-201ENST00000364019 141 ntBASIC2.19□□□□□ -2.06
TCRBV5S1A1TA0A578 RNA5SP160-201ENST00000364866 120 ntBASIC2.19□□□□□ -2.06
TCRBV5S1A1TA0A578 RNU6-117P-201ENST00000365415 107 ntBASIC2.19□□□□□ -2.06
TCRBV5S1A1TA0A578 MIR526A2-201ENST00000390198 65 ntBASIC2.19□□□□□ -2.06
TCRBV5S1A1TA0A578 RNU2-2P-201ENST00000410396 191 ntBASIC2.19□□□□□ -2.06
TCRBV5S1A1TA0A578 SNORA36B-201ENST00000410438 131 ntBASIC2.19□□□□□ -2.06
TCRBV5S1A1TA0A578 RNA5SP511-201ENST00000410487 115 ntBASIC2.19□□□□□ -2.06
TCRBV5S1A1TA0A578 RN7SKP284-201ENST00000411002 343 ntBASIC2.19□□□□□ -2.06
TCRBV5S1A1TA0A578 AL135786.1-201ENST00000415892 214 ntBASIC2.19□□□□□ -2.06
TCRBV5S1A1TA0A578 Z98742.3-201ENST00000418637 326 ntBASIC2.19□□□□□ -2.06
TCRBV5S1A1TA0A578 HMGN2P34-201ENST00000437647 269 ntBASIC2.19□□□□□ -2.06
TCRBV5S1A1TA0A578 SUMO1P3-201ENST00000439961 304 ntBASIC2.19□□□□□ -2.06
TCRBV5S1A1TA0A578 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.19□□□□□ -2.06
TCRBV5S1A1TA0A578 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.19□□□□□ -2.06
TCRBV5S1A1TA0A578 RNU7-172P-201ENST00000517125 64 ntBASIC2.19□□□□□ -2.06
TCRBV5S1A1TA0A578 IGKV3-31-201ENST00000523109 329 ntBASIC2.19□□□□□ -2.06
TCRBV5S1A1TA0A578 AC026271.5-201ENST00000577873 130 ntBASIC2.19□□□□□ -2.06
TCRBV5S1A1TA0A578 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.19□□□□□ -2.06
TCRBV5S1A1TA0A578 AL590808.1-201ENST00000618696 141 ntBASIC2.19□□□□□ -2.06
TCRBV5S1A1TA0A578 U6.73-201ENST00000619194 103 ntBASIC2.19□□□□□ -2.06
TCRBV5S1A1TA0A578 MAPK10-266ENST00000641066 6555 ntBASIC2.19□□□□□ -2.06
TCRBV5S1A1TA0A578 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
TCRBV5S1A1TA0A578 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.18□□□□□ -2.06
TCRBV5S1A1TA0A578 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TCRBV5S1A1TA0A578 Z82195.2-201ENST00000612348 18351 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms